Zhikai Li
		
	commited on
		
		
					Commit 
							
							·
						
						55ea711
	
1
								Parent(s):
							
							4267cc2
								
Upload adapter model
Browse files- Model-demo-35M.zip +3 -0
- README.md +42 -0
- adapter_config.json +34 -0
- adapter_model.safetensors +3 -0
- metadata.json +3 -0
    	
        Model-demo-35M.zip
    ADDED
    
    | @@ -0,0 +1,3 @@ | |
|  | |
|  | |
|  | 
|  | |
| 1 | 
            +
            version https://git-lfs.github.com/spec/v1
         | 
| 2 | 
            +
            oid sha256:0d04b0672a2bfc50f598af4e5a2d64e717d0009c0890599b281215a35f8170ce
         | 
| 3 | 
            +
            size 3947575
         | 
    	
        README.md
    ADDED
    
    | @@ -0,0 +1,42 @@ | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | 
|  | |
| 1 | 
            +
             | 
| 2 | 
            +
            ---
         | 
| 3 | 
            +
             | 
| 4 | 
            +
            base_model: ProTrekHub/Protein_Encoder_35M 
         | 
| 5 | 
            +
             | 
| 6 | 
            +
            library_name: peft
         | 
| 7 | 
            +
             | 
| 8 | 
            +
            ---
         | 
| 9 | 
            +
             | 
| 10 | 
            +
             | 
| 11 | 
            +
             | 
| 12 | 
            +
            # Model Card for Model-demo-35M
         | 
| 13 | 
            +
            This model is used for a demo classification task
         | 
| 14 | 
            +
             | 
| 15 | 
            +
            ## Task type
         | 
| 16 | 
            +
            Protein-level Regression
         | 
| 17 | 
            +
             | 
| 18 | 
            +
            ## Model input type
         | 
| 19 | 
            +
            AA Sequence
         | 
| 20 | 
            +
             | 
| 21 | 
            +
            ## Label meanings
         | 
| 22 | 
            +
            A, B
         | 
| 23 | 
            +
             | 
| 24 | 
            +
            ## LoRA config
         | 
| 25 | 
            +
             | 
| 26 | 
            +
            - **r:** 8
         | 
| 27 | 
            +
            - **lora_dropout:** 0.0
         | 
| 28 | 
            +
            - **lora_alpha:** 16
         | 
| 29 | 
            +
            - **target_modules:** ['intermediate.dense', 'value', 'query', 'output.dense', 'key']
         | 
| 30 | 
            +
            - **modules_to_save:** ['classifier']
         | 
| 31 | 
            +
             | 
| 32 | 
            +
            ## Training config
         | 
| 33 | 
            +
             | 
| 34 | 
            +
            - **optimizer:**
         | 
| 35 | 
            +
              - **class:** AdamW
         | 
| 36 | 
            +
              - **betas:** (0.9, 0.98)
         | 
| 37 | 
            +
              - **weight_decay:** 0.01
         | 
| 38 | 
            +
            - **learning rate:** 0.001
         | 
| 39 | 
            +
            - **epoch:** 10
         | 
| 40 | 
            +
            - **batch size:** 2
         | 
| 41 | 
            +
            - **precision:** 16-mixed 
         | 
| 42 | 
            +
             | 
    	
        adapter_config.json
    ADDED
    
    | @@ -0,0 +1,34 @@ | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | |
|  | 
|  | |
| 1 | 
            +
            {
         | 
| 2 | 
            +
              "alpha_pattern": {},
         | 
| 3 | 
            +
              "auto_mapping": null,
         | 
| 4 | 
            +
              "base_model_name_or_path": "ProTrekHub/Protein_Encoder_35M",
         | 
| 5 | 
            +
              "bias": "none",
         | 
| 6 | 
            +
              "fan_in_fan_out": false,
         | 
| 7 | 
            +
              "inference_mode": true,
         | 
| 8 | 
            +
              "init_lora_weights": true,
         | 
| 9 | 
            +
              "layer_replication": null,
         | 
| 10 | 
            +
              "layers_pattern": null,
         | 
| 11 | 
            +
              "layers_to_transform": null,
         | 
| 12 | 
            +
              "loftq_config": {},
         | 
| 13 | 
            +
              "lora_alpha": 16,
         | 
| 14 | 
            +
              "lora_dropout": 0.0,
         | 
| 15 | 
            +
              "megatron_config": null,
         | 
| 16 | 
            +
              "megatron_core": "megatron.core",
         | 
| 17 | 
            +
              "modules_to_save": [
         | 
| 18 | 
            +
                "classifier"
         | 
| 19 | 
            +
              ],
         | 
| 20 | 
            +
              "peft_type": "LORA",
         | 
| 21 | 
            +
              "r": 8,
         | 
| 22 | 
            +
              "rank_pattern": {},
         | 
| 23 | 
            +
              "revision": null,
         | 
| 24 | 
            +
              "target_modules": [
         | 
| 25 | 
            +
                "intermediate.dense",
         | 
| 26 | 
            +
                "value",
         | 
| 27 | 
            +
                "query",
         | 
| 28 | 
            +
                "output.dense",
         | 
| 29 | 
            +
                "key"
         | 
| 30 | 
            +
              ],
         | 
| 31 | 
            +
              "task_type": "SEQ_CLS",
         | 
| 32 | 
            +
              "use_dora": false,
         | 
| 33 | 
            +
              "use_rslora": false
         | 
| 34 | 
            +
            }
         | 
    	
        adapter_model.safetensors
    ADDED
    
    | @@ -0,0 +1,3 @@ | |
|  | |
|  | |
|  | 
|  | |
| 1 | 
            +
            version https://git-lfs.github.com/spec/v1
         | 
| 2 | 
            +
            oid sha256:0cc195158113ecb0f18c0abd7e5bc39e388f180c229ba0b482b8c7bd20f6187e
         | 
| 3 | 
            +
            size 4263476
         | 
    	
        metadata.json
    ADDED
    
    | @@ -0,0 +1,3 @@ | |
|  | |
|  | |
|  | 
|  | |
| 1 | 
            +
            {
         | 
| 2 | 
            +
                "training_data_type": "AA"
         | 
| 3 | 
            +
            }
         | 
