GenoTEX / p3 /regress /Anorexia_Nervosa /significant_genes_condition_Schizophrenia.json
Liu-Hy's picture
Add files using upload-large-folder tool
2e06bc9 verified
raw
history blame
24.8 kB
{
"significant_genes": {
"Variable": [
"AKT2",
"ARG1",
"ADGRD1",
"ABCA7",
"CDX1",
"XIST",
"ACE2",
"FGFBP2",
"CEACAM8",
"DSCR8",
"EIF1AY",
"BCO1",
"ALDH1A2",
"AP1S3",
"BRAP",
"C12orf57",
"DDX6",
"EPS8L1",
"BOD1L1",
"CXCL9",
"MAML2",
"ACAT1",
"HTN1",
"DCDC1",
"ADAMTS9",
"TNFRSF10D",
"CEACAM3",
"ANKRD42",
"KRTAP10-4",
"AK1",
"DSG2",
"ACTR1B",
"EPB42",
"CDR1",
"AQP8",
"GDF6",
"ASIP",
"BMAL2",
"C5orf34",
"ADAM28",
"ANO6",
"ACAP1",
"ASB7",
"APOBEC3C",
"ATP2B4",
"C4BPA",
"LINC00314",
"ACBD4",
"PXT1",
"CDKAL1",
"SHANK1",
"ADAM22",
"ALPK3",
"BCORP1",
"ANKS1A",
"CNGA3",
"ACAP3",
"CCN4",
"ERICH6",
"ADCY6",
"ADCY5",
"PKP1",
"BATF2",
"ZNF706",
"MAGEA8",
"BUD31",
"PRKY",
"C10orf95",
"C8orf44",
"DDT",
"FLJ33534",
"BMX",
"CATSPER2P1",
"ZNF804B",
"A4GALT",
"CD163",
"OR2A12",
"IL15RA",
"CDX2",
"SNAP29",
"DEFA1",
"BPIFA2",
"HFE",
"FYB2",
"BMF",
"BOLA3",
"CACNG1",
"RAD51AP2",
"CAPN5",
"ACKR4",
"CCDC190",
"IFNA6",
"ADARB2",
"CD207",
"ACOX1",
"BLNK",
"ANXA11",
"AMDHD1",
"HNF1A",
"ASAP3",
"CATSPER3",
"AMIGO2",
"PCDHGA2",
"CYP1B1-AS1",
"AKAP8",
"CTSG",
"PLB1",
"OPRM1",
"GAGE4",
"CTSW",
"NLGN4Y",
"C11orf98",
"ABHD13",
"CREB3L3",
"AGMAT",
"LRRC25",
"CCR8",
"EWSR1",
"ALDH18A1",
"SLC22A8",
"ARID5A",
"CDIPT",
"AIP",
"PRR11",
"DDX3Y",
"OR2M5",
"PMM1",
"OXSR1",
"KRTAP4-1",
"IL12B",
"CCL23",
"NKX6-1",
"HLA-DQB1",
"OR2A14",
"ART5",
"TYW5",
"KLK8",
"OR5AC2",
"ADAM15",
"CRYZ",
"SAPCD1",
"CYBB",
"GTF3C4",
"FGF6",
"CORT",
"EME2",
"ADAD2",
"TSHB",
"HTR4",
"AQP7",
"CARD14",
"RPP14",
"PARP3",
"HTR1F",
"ABCC10",
"ACSM4",
"RNASE3",
"CACNA1C",
"TAS1R2",
"IRGC",
"MRPL52",
"CHTF18",
"EEFSEC",
"IL17REL",
"GSDMA",
"ZNF516",
"CNNM4",
"FCGR2B",
"MYO15A",
"DDI1",
"GSTA1",
"ARL17A",
"TTTY15",
"AGBL4",
"DAB1",
"APEX1",
"ARFRP1",
"BOP1",
"ANXA2P1",
"FLVCR2",
"OR52I1",
"DARS2",
"PAX5",
"UPK1B",
"ZNF818P",
"CYP24A1",
"DEFB125",
"DCANP1",
"BSND",
"P2RY2",
"KRT1",
"FAM9A",
"DCT",
"MSX2P1",
"DNAAF3",
"KCNK17",
"CLEC2B",
"CPNE7",
"DOK2",
"ERI2",
"SLC16A13",
"DUSP9",
"BLM",
"TP53I3",
"H2AB1",
"ARF1",
"FGF3",
"NUDT4B",
"GFI1",
"FAM90A8",
"BBS9",
"ACOT2",
"DCAF12L1",
"MAGEB10",
"COL23A1",
"GAGE6",
"CENPM",
"KDM5D",
"ELK1",
"NHEJ1",
"PDYN",
"GFPT2",
"ANGPT2",
"SLC24A5",
"CGB5",
"NXPH3",
"COL4A1",
"SHPK",
"HLA-DOB",
"CYP3A43",
"GAGE12G",
"FAM163B",
"ZNF382",
"ATF6B",
"GAGE5",
"E2F8",
"KRTAP10-7",
"LCN1",
"CCDC181",
"B3GALT6",
"CCL26",
"KRT2",
"FAM117A",
"OR5D14",
"RMDN2",
"ACTRT2",
"SLC18A3",
"STX18",
"AP1G2",
"CELA2B",
"CX3CR1",
"OR10G7",
"STPG1",
"CAPG",
"GPRC5D",
"SLFNL1",
"ARHGAP26",
"MCMBP",
"CEMIP2",
"DPEP2",
"PCDHA11",
"CIITA",
"LIMD2",
"BDKRB2",
"CRH",
"TBC1D31"
],
"Coefficient": [
0.034042770794303234,
0.030162154984049123,
0.02945392592380842,
0.02860588653056793,
0.0277013474713723,
0.02567740780507914,
0.02554933511009386,
0.02387963516251841,
-0.02379019123316222,
0.023130125093272356,
-0.020068528569729238,
0.019391954305317226,
0.01897335259499259,
-0.01882242303495772,
0.018642099651434384,
-0.018430459743504102,
0.017803111165703947,
0.017281140584296747,
0.01711831092383753,
0.017035166814657093,
0.016869897787740437,
-0.016542431653037298,
0.016050722631641628,
0.015850663349565298,
0.015645687043496583,
-0.015396117306285649,
0.015069894353297255,
0.014876752925699092,
-0.014602823373010412,
-0.014555909951147722,
0.013845811315959902,
0.013762843445511742,
0.013472580422696702,
0.012977271418804648,
0.012867872555202761,
-0.012806366382666048,
0.012560872974046683,
0.012372580185883686,
0.011960003419138363,
-0.011899615315758595,
0.011742058512690787,
0.011627085269821024,
0.011620234146498438,
0.011384732790928003,
0.011344495630442201,
-0.011230504246497078,
0.01113867924748756,
0.010949647684408939,
-0.010924563414383021,
-0.010713755009281607,
0.01069128420677227,
0.010678362200898607,
0.010522486894277665,
-0.009798102959914241,
-0.009710127216457113,
-0.009504061220057747,
0.0094088530918986,
-0.009169160093179854,
0.009036099423702532,
0.008886389700590174,
0.008592528273646755,
0.008489077139430876,
0.008444540415300806,
0.008214875677760433,
-0.008023297488680244,
-0.008015590279363532,
-0.007886515113589104,
-0.007717119569741748,
0.007635546545807339,
-0.007587941129617914,
0.007470942959295427,
-0.0074673291664459785,
0.007454166887328451,
0.007264720903925208,
0.007244444900922311,
0.007095800911394567,
-0.006891903743169351,
-0.006889958738788149,
-0.006749893223377832,
0.006708132573974934,
-0.006638323083992899,
0.006630489459476473,
-0.006549977951311759,
0.006382903627302343,
-0.006171230309585819,
-0.006102931078246695,
-0.005938904642183315,
0.0058375062384380385,
0.005799827825598873,
-0.005782704387668628,
-0.005644389679172323,
-0.005486391634367938,
-0.005435561934797961,
-0.00542786387553347,
0.0050392991135181815,
0.004995950971865881,
0.004984730110056279,
0.004983949519470614,
-0.004918744224029545,
0.004845184510251568,
-0.004789455501294309,
0.004558773985128098,
-0.004547097234189749,
0.004440177550661249,
-0.004383938814184886,
-0.004381216419239774,
-0.004351674987289353,
0.0042737026372619835,
-0.004184624898476356,
-0.004174077609496954,
-0.004166684980876528,
-0.004076897172929371,
-0.004001789195493501,
0.003975678492058097,
-0.003948172595120576,
-0.0038526184275096418,
0.0038303988934994724,
-0.0036434781128751813,
0.003565345691936092,
0.0035246320373866487,
0.0035079549287504305,
0.003492556362020978,
-0.0034361252661606586,
0.0033553311207400343,
-0.003336551195814102,
0.003283852549557199,
-0.003279761877892621,
-0.003254857612671755,
-0.0032489092349531038,
-0.0032309514708221557,
-0.003089066656223162,
-0.003057907443707393,
0.0030448305646112914,
0.003018976622652566,
-0.0028665589744253936,
0.0028071003672247383,
-0.002802547751634576,
0.0027940805652478242,
0.002775375457183294,
0.002736513459636614,
-0.00257871591419522,
-0.00252531099234476,
0.0024896779957446808,
0.0024508104812361736,
-0.002306784485627917,
-0.0022993289408162697,
0.0021021245995316335,
0.002056227498987568,
0.0020513705332319008,
0.0020470711759715114,
-0.002033938916776682,
0.002013842838064008,
-0.0020073201355361083,
0.0019870443563051047,
0.0019709846542413792,
-0.0019060955342646015,
-0.001886702029689211,
0.0018528812409828368,
-0.0018200716232619533,
-0.001812004437482318,
-0.0017957968279689398,
0.001762391566189308,
-0.001742297345511986,
-0.0017293040506166457,
0.0015945091163273196,
-0.0015716723103797283,
0.0015443749796796864,
0.0014821260249237777,
0.0014687014276417705,
-0.001435781961167214,
-0.0013910349668506696,
0.0012736701682236381,
-0.0012706697656042379,
0.0012203850181318793,
-0.0012172889416325486,
-0.00115088978159515,
0.001073596032066523,
0.0010349671047902317,
0.001034277683091731,
-0.000989862861480996,
-0.00094986509780267,
-0.0009164887582397399,
-0.0008885497602329208,
-0.0008805087419639855,
0.0008781193137881349,
-0.0008763201499797688,
-0.0008478581011599005,
-0.0008231228482062736,
-0.0008096390874753941,
-0.0007593712195509835,
0.000720323475778016,
0.0007180970962905105,
0.0006977262491232271,
0.0006961271906143185,
0.0006657388200724672,
-0.0006328612610024826,
0.0006203890003425551,
0.0006069380734175074,
-0.0006049620189612107,
-0.0005648290255925318,
0.0005537945321037487,
-0.0005485185857880245,
-0.000540421053508362,
-0.0005362449837364755,
0.0005118341667061711,
0.0005016250650668814,
-0.000499568475412372,
-0.00046453069322167993,
-0.0004636672819234329,
0.00046157656645881914,
-0.0004364682367146876,
-0.00042699169963238945,
-0.00041566898764123865,
0.0003932668468350582,
0.0003846699138792875,
-0.00038328398950458433,
0.00038201553128675746,
-0.00037589775409230817,
0.0003467254954034169,
-0.00030317905766298283,
0.00030304177061000266,
0.000285521068521485,
0.0002845200979856936,
-0.0002631184270792855,
0.00025691837581150775,
-0.00022604630904134634,
0.00019280738339658786,
-0.00018458620964257986,
0.00017574741658179933,
0.00015590543217192947,
-0.00015422267558872169,
-0.00014754948248875126,
0.00014609728161638422,
0.00014455600666595276,
-0.00014061624831181166,
-0.00013464553916498127,
0.00011625456339137582,
0.00011263795261034399,
-0.00011045331988411268,
0.00010551843028293334,
-0.00010111415013326028,
-9.401957413957073e-05,
8.115967222365925e-05,
-6.365461955950716e-05,
6.006138310500437e-05,
-5.5981209190213584e-05,
-5.5372499171025455e-05,
-5.326227992043785e-05,
4.725843538498879e-05,
4.2542060228012126e-05,
-3.835623068858784e-05,
-3.718036394172461e-05,
-3.697532075192633e-05,
2.7177245365039732e-05,
-2.2472335333041423e-05,
-2.152791464949939e-05,
1.9153954295121614e-05,
-1.9058161552191935e-05,
1.4572438009717413e-05,
-9.126529038447575e-06,
8.745469065819378e-06,
-8.634744336866525e-06,
-5.946058458921534e-06,
5.3834042871637035e-06,
-5.211178631036165e-06,
1.3234312740184082e-06
],
"Absolute Coefficient": [
0.034042770794303234,
0.030162154984049123,
0.02945392592380842,
0.02860588653056793,
0.0277013474713723,
0.02567740780507914,
0.02554933511009386,
0.02387963516251841,
0.02379019123316222,
0.023130125093272356,
0.020068528569729238,
0.019391954305317226,
0.01897335259499259,
0.01882242303495772,
0.018642099651434384,
0.018430459743504102,
0.017803111165703947,
0.017281140584296747,
0.01711831092383753,
0.017035166814657093,
0.016869897787740437,
0.016542431653037298,
0.016050722631641628,
0.015850663349565298,
0.015645687043496583,
0.015396117306285649,
0.015069894353297255,
0.014876752925699092,
0.014602823373010412,
0.014555909951147722,
0.013845811315959902,
0.013762843445511742,
0.013472580422696702,
0.012977271418804648,
0.012867872555202761,
0.012806366382666048,
0.012560872974046683,
0.012372580185883686,
0.011960003419138363,
0.011899615315758595,
0.011742058512690787,
0.011627085269821024,
0.011620234146498438,
0.011384732790928003,
0.011344495630442201,
0.011230504246497078,
0.01113867924748756,
0.010949647684408939,
0.010924563414383021,
0.010713755009281607,
0.01069128420677227,
0.010678362200898607,
0.010522486894277665,
0.009798102959914241,
0.009710127216457113,
0.009504061220057747,
0.0094088530918986,
0.009169160093179854,
0.009036099423702532,
0.008886389700590174,
0.008592528273646755,
0.008489077139430876,
0.008444540415300806,
0.008214875677760433,
0.008023297488680244,
0.008015590279363532,
0.007886515113589104,
0.007717119569741748,
0.007635546545807339,
0.007587941129617914,
0.007470942959295427,
0.0074673291664459785,
0.007454166887328451,
0.007264720903925208,
0.007244444900922311,
0.007095800911394567,
0.006891903743169351,
0.006889958738788149,
0.006749893223377832,
0.006708132573974934,
0.006638323083992899,
0.006630489459476473,
0.006549977951311759,
0.006382903627302343,
0.006171230309585819,
0.006102931078246695,
0.005938904642183315,
0.0058375062384380385,
0.005799827825598873,
0.005782704387668628,
0.005644389679172323,
0.005486391634367938,
0.005435561934797961,
0.00542786387553347,
0.0050392991135181815,
0.004995950971865881,
0.004984730110056279,
0.004983949519470614,
0.004918744224029545,
0.004845184510251568,
0.004789455501294309,
0.004558773985128098,
0.004547097234189749,
0.004440177550661249,
0.004383938814184886,
0.004381216419239774,
0.004351674987289353,
0.0042737026372619835,
0.004184624898476356,
0.004174077609496954,
0.004166684980876528,
0.004076897172929371,
0.004001789195493501,
0.003975678492058097,
0.003948172595120576,
0.0038526184275096418,
0.0038303988934994724,
0.0036434781128751813,
0.003565345691936092,
0.0035246320373866487,
0.0035079549287504305,
0.003492556362020978,
0.0034361252661606586,
0.0033553311207400343,
0.003336551195814102,
0.003283852549557199,
0.003279761877892621,
0.003254857612671755,
0.0032489092349531038,
0.0032309514708221557,
0.003089066656223162,
0.003057907443707393,
0.0030448305646112914,
0.003018976622652566,
0.0028665589744253936,
0.0028071003672247383,
0.002802547751634576,
0.0027940805652478242,
0.002775375457183294,
0.002736513459636614,
0.00257871591419522,
0.00252531099234476,
0.0024896779957446808,
0.0024508104812361736,
0.002306784485627917,
0.0022993289408162697,
0.0021021245995316335,
0.002056227498987568,
0.0020513705332319008,
0.0020470711759715114,
0.002033938916776682,
0.002013842838064008,
0.0020073201355361083,
0.0019870443563051047,
0.0019709846542413792,
0.0019060955342646015,
0.001886702029689211,
0.0018528812409828368,
0.0018200716232619533,
0.001812004437482318,
0.0017957968279689398,
0.001762391566189308,
0.001742297345511986,
0.0017293040506166457,
0.0015945091163273196,
0.0015716723103797283,
0.0015443749796796864,
0.0014821260249237777,
0.0014687014276417705,
0.001435781961167214,
0.0013910349668506696,
0.0012736701682236381,
0.0012706697656042379,
0.0012203850181318793,
0.0012172889416325486,
0.00115088978159515,
0.001073596032066523,
0.0010349671047902317,
0.001034277683091731,
0.000989862861480996,
0.00094986509780267,
0.0009164887582397399,
0.0008885497602329208,
0.0008805087419639855,
0.0008781193137881349,
0.0008763201499797688,
0.0008478581011599005,
0.0008231228482062736,
0.0008096390874753941,
0.0007593712195509835,
0.000720323475778016,
0.0007180970962905105,
0.0006977262491232271,
0.0006961271906143185,
0.0006657388200724672,
0.0006328612610024826,
0.0006203890003425551,
0.0006069380734175074,
0.0006049620189612107,
0.0005648290255925318,
0.0005537945321037487,
0.0005485185857880245,
0.000540421053508362,
0.0005362449837364755,
0.0005118341667061711,
0.0005016250650668814,
0.000499568475412372,
0.00046453069322167993,
0.0004636672819234329,
0.00046157656645881914,
0.0004364682367146876,
0.00042699169963238945,
0.00041566898764123865,
0.0003932668468350582,
0.0003846699138792875,
0.00038328398950458433,
0.00038201553128675746,
0.00037589775409230817,
0.0003467254954034169,
0.00030317905766298283,
0.00030304177061000266,
0.000285521068521485,
0.0002845200979856936,
0.0002631184270792855,
0.00025691837581150775,
0.00022604630904134634,
0.00019280738339658786,
0.00018458620964257986,
0.00017574741658179933,
0.00015590543217192947,
0.00015422267558872169,
0.00014754948248875126,
0.00014609728161638422,
0.00014455600666595276,
0.00014061624831181166,
0.00013464553916498127,
0.00011625456339137582,
0.00011263795261034399,
0.00011045331988411268,
0.00010551843028293334,
0.00010111415013326028,
9.401957413957073e-05,
8.115967222365925e-05,
6.365461955950716e-05,
6.006138310500437e-05,
5.5981209190213584e-05,
5.5372499171025455e-05,
5.326227992043785e-05,
4.725843538498879e-05,
4.2542060228012126e-05,
3.835623068858784e-05,
3.718036394172461e-05,
3.697532075192633e-05,
2.7177245365039732e-05,
2.2472335333041423e-05,
2.152791464949939e-05,
1.9153954295121614e-05,
1.9058161552191935e-05,
1.4572438009717413e-05,
9.126529038447575e-06,
8.745469065819378e-06,
8.634744336866525e-06,
5.946058458921534e-06,
5.3834042871637035e-06,
5.211178631036165e-06,
1.3234312740184082e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 87.82608695652173,
"precision": 46.666666666666664,
"recall": 33.33333333333333,
"f1": 38.09523809523809
},
"selection": {
"precision": 0.6130121496925629,
"recall": 1.7391304347826086,
"f1": 0.9057962387576002,
"jaccard": 0.4563343053185993
}
}
}