GenoTEX / p3 /regress /Cardiovascular_Disease /significant_genes_condition_Obesity.json
Liu-Hy's picture
Add files using upload-large-folder tool
a38ceef verified
raw
history blame
11.3 kB
{
"significant_genes": {
"Variable": [
"H3-4",
"RPLP1",
"SUPT7L",
"GAGE10",
"MEPCE",
"FTH1",
"EIF3C",
"SLC35B1",
"TAFA5",
"SMN1",
"NFRKB",
"PPP1CB",
"RPS6",
"PRMT8",
"ETFA",
"TNS2",
"TAF15",
"CXCL12",
"MICALL2",
"SPDYE3",
"ALDOA",
"TRAF3IP3",
"BIVM",
"ADAM15",
"SSX4B",
"VCP",
"TMEM126B",
"RPL29",
"PDK4",
"SNW1",
"ELMO1",
"DPP8",
"ALOX15",
"STBD1",
"VPS41",
"YY1",
"ARPC5",
"ZNF397",
"PCMTD1",
"PREB",
"RPS21",
"ZNF22",
"PABPC1",
"AHNAK",
"FNDC11",
"CTDNEP1",
"CERT1",
"RNPS1",
"ATXN7L1",
"ATF2",
"FOXS1",
"PSMB6",
"NSMCE1",
"HGSNAT",
"SF3B2",
"SLAIN2",
"JOSD2",
"HNRNPA0",
"ADRB2",
"MARK4",
"GLRX",
"TTYH3",
"DARS1",
"PGM2",
"NACA",
"CAPZB",
"CYTH4",
"PRR32",
"SMR3B",
"EIF4EBP2",
"UBE4B",
"CLDN7",
"TMSB4X",
"PLCE1",
"PLOD3",
"FBXO2",
"ZNF619",
"PIM1",
"CCDC9",
"LYRM9",
"KRT12",
"LMBR1L",
"CAND1",
"S100A6",
"FAM3D",
"RPL11",
"DDOST",
"SOX8",
"LZTS1",
"RHBDD3",
"MRPL36",
"UBE2L3",
"KLK9",
"GRIN2A",
"CRISPLD1",
"ZNF616",
"KANSL2",
"SMAGP",
"PCIF1",
"CHD4",
"ZFAND2B",
"ARID1B",
"ACSM5",
"PCGF3",
"RPA1",
"C1QBP",
"KAT2A",
"HEATR5A",
"SEC11A",
"BRPF3",
"GREM1",
"ADRA1D",
"ALPG",
"ITPRID2",
"BCAS2",
"DCTN2",
"YAE1",
"CASP2",
"WIPI1"
],
"Coefficient": [
-0.09183236488239983,
0.05919059818309351,
-0.04961311273363571,
0.04305192098234038,
0.03470502818198544,
0.03129221262908667,
-0.015026641936230729,
0.01431295306801015,
0.014252677488557523,
0.013425479361034285,
0.012964995578997643,
0.012717575601893814,
0.012531182221573485,
-0.012373630881692285,
0.012153416556562853,
0.0117917002826087,
0.011015496147740866,
0.010782218711359747,
0.010506296738196351,
-0.009759027640564542,
0.009337502505189969,
0.00853514190192511,
0.008524506058430598,
-0.008136904020569413,
0.007821565905763534,
0.0077219868897449315,
0.007305424634384082,
0.00723917768707823,
-0.006975211104475884,
0.006740481989248516,
-0.0067200512798057215,
0.006595343042136324,
0.006517603608140359,
0.006505697768715434,
0.006451986013285167,
0.006306324933438301,
-0.006299347701721941,
-0.006254883410125465,
-0.0061470416768662625,
0.005684875638381705,
0.005541231347910924,
0.0052846129008515,
0.005182151500454886,
0.005177026058943494,
0.004939687451693165,
0.004547858812974617,
0.004534475792929021,
0.004516390633092336,
0.004481237208274708,
0.0043998900296051725,
0.0043405448087841855,
-0.004329612592323908,
-0.004287071606007344,
0.004252274695427391,
0.004244987877923035,
0.004181236639089814,
0.003862815229521291,
0.003798019945004001,
0.0036009578235683412,
0.0035871674343545845,
-0.003577084297081264,
0.003505069473989119,
-0.0033806235747260156,
0.0032345684269657446,
0.0032322350298248223,
0.0032106312169390677,
0.0031877027336665972,
-0.003089801434464551,
0.0030630027294742614,
0.002943113414207362,
0.0029289119131374374,
0.002880270651895547,
0.0028568184109155578,
0.0027635413032349723,
-0.002757485809358896,
0.0025063512307084593,
0.0024943230793034923,
0.0024614427007479444,
0.002409928810175695,
0.002400383687199459,
0.0023590220128249595,
0.002288887999996334,
0.0021909072299513897,
0.002177085947208072,
-0.0020838617791309553,
0.0019857573781214936,
0.0018099208577842725,
0.0017941352669319554,
0.0017412749720696042,
-0.0016737602177390753,
0.0016465165608594442,
-0.001625554835942562,
-0.0014986685995293726,
0.001435630920543479,
-0.0014179230045288905,
-0.0013854912595435893,
-0.0011982806375680137,
0.0011555562960015502,
0.0011249153276040847,
0.0009753651853671609,
0.0008395533534372253,
0.0008363330307195882,
-0.0007761950513251076,
0.0007109424040990155,
0.0006736941206725385,
0.0006497683007898818,
0.0005648125872450793,
0.0005277316236633789,
0.00044205434239782954,
-0.0004144614520090719,
0.00030595626774705567,
0.00028559756828231927,
-0.0002799094678458146,
0.0002584701551997952,
0.00023295100423307804,
-0.00020549131649195442,
0.0001542716918369602,
2.1158499609682438e-05,
6.838067437688377e-06
],
"Absolute Coefficient": [
0.09183236488239983,
0.05919059818309351,
0.04961311273363571,
0.04305192098234038,
0.03470502818198544,
0.03129221262908667,
0.015026641936230729,
0.01431295306801015,
0.014252677488557523,
0.013425479361034285,
0.012964995578997643,
0.012717575601893814,
0.012531182221573485,
0.012373630881692285,
0.012153416556562853,
0.0117917002826087,
0.011015496147740866,
0.010782218711359747,
0.010506296738196351,
0.009759027640564542,
0.009337502505189969,
0.00853514190192511,
0.008524506058430598,
0.008136904020569413,
0.007821565905763534,
0.0077219868897449315,
0.007305424634384082,
0.00723917768707823,
0.006975211104475884,
0.006740481989248516,
0.0067200512798057215,
0.006595343042136324,
0.006517603608140359,
0.006505697768715434,
0.006451986013285167,
0.006306324933438301,
0.006299347701721941,
0.006254883410125465,
0.0061470416768662625,
0.005684875638381705,
0.005541231347910924,
0.0052846129008515,
0.005182151500454886,
0.005177026058943494,
0.004939687451693165,
0.004547858812974617,
0.004534475792929021,
0.004516390633092336,
0.004481237208274708,
0.0043998900296051725,
0.0043405448087841855,
0.004329612592323908,
0.004287071606007344,
0.004252274695427391,
0.004244987877923035,
0.004181236639089814,
0.003862815229521291,
0.003798019945004001,
0.0036009578235683412,
0.0035871674343545845,
0.003577084297081264,
0.003505069473989119,
0.0033806235747260156,
0.0032345684269657446,
0.0032322350298248223,
0.0032106312169390677,
0.0031877027336665972,
0.003089801434464551,
0.0030630027294742614,
0.002943113414207362,
0.0029289119131374374,
0.002880270651895547,
0.0028568184109155578,
0.0027635413032349723,
0.002757485809358896,
0.0025063512307084593,
0.0024943230793034923,
0.0024614427007479444,
0.002409928810175695,
0.002400383687199459,
0.0023590220128249595,
0.002288887999996334,
0.0021909072299513897,
0.002177085947208072,
0.0020838617791309553,
0.0019857573781214936,
0.0018099208577842725,
0.0017941352669319554,
0.0017412749720696042,
0.0016737602177390753,
0.0016465165608594442,
0.001625554835942562,
0.0014986685995293726,
0.001435630920543479,
0.0014179230045288905,
0.0013854912595435893,
0.0011982806375680137,
0.0011555562960015502,
0.0011249153276040847,
0.0009753651853671609,
0.0008395533534372253,
0.0008363330307195882,
0.0007761950513251076,
0.0007109424040990155,
0.0006736941206725385,
0.0006497683007898818,
0.0005648125872450793,
0.0005277316236633789,
0.00044205434239782954,
0.0004144614520090719,
0.00030595626774705567,
0.00028559756828231927,
0.0002799094678458146,
0.0002584701551997952,
0.00023295100423307804,
0.00020549131649195442,
0.0001542716918369602,
2.1158499609682438e-05,
6.838067437688377e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 99.02439024390245,
"precision": 98.94444444444444,
"recall": 100.0,
"f1": 99.4651453021929
},
"selection": {
"precision": 2.7142107707213627,
"recall": 1.421319796954315,
"f1": 1.8651537861456096,
"jaccard": 0.9420370872088748
}
}
}