GenoTEX / p3 /regress /Crohns_Disease /significant_genes_condition_Age.json
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{
"significant_genes": {
"Variable": [
"NPHP3-AS1",
"SH3RF2",
"CSTPP1",
"CFAP44",
"RAB3A",
"AGPAT3",
"CIB1",
"SPINK8",
"EPHX4",
"CHAMP1",
"SLC39A3",
"MIX23",
"FZD3",
"ICE2",
"BATF2",
"DNAJC3",
"FBXO44",
"PMS2CL",
"ABHD13",
"BAALC",
"AP1S1",
"ZSWIM7",
"KCTD10",
"NPR2",
"CYP2D7",
"B4GAT1",
"FECH",
"INPP5B",
"FAT1",
"ASL",
"TCL1A",
"PLIN2",
"PPFIA4",
"SPPL3",
"RGN",
"JUP",
"CMTM8",
"NOL3",
"FTL",
"MTMR11",
"ZNF211",
"HIC1",
"ZHX3",
"TMEM186",
"ZFP69",
"MMS22L",
"CLEC11A",
"PIM3",
"GPR143",
"CCL23",
"EMC2",
"CACNB3",
"TOP1",
"LAMTOR1",
"GABPB2",
"P2RY10",
"SKAP2",
"ZFP14",
"PLAAT1",
"RGS1",
"INSL3",
"UBB",
"SCRN1",
"PPP1R13L",
"PKHD1L1",
"TCEAL4",
"ZNF568",
"ZNF718",
"ENTPD7",
"PFDN6",
"ERAP2",
"PIGO",
"ATP6V1E2",
"CCN2",
"EHD3",
"CCL28",
"CGB7",
"FABP4",
"COLGALT2",
"LIPC",
"AGAP7P",
"NHSL3",
"KREMEN2",
"TSPAN4",
"KIR2DL4",
"UBC",
"CITED4",
"TYMS",
"TRIM52",
"CFH",
"DNAL1",
"AIPL1",
"FN3KRP",
"IGFBP2",
"TLR9",
"ZNF329",
"PTPRT",
"CDPF1",
"SLITRK2",
"LINC02902",
"TNFSF11",
"ADA2",
"CCDC18",
"CDYL",
"SOX13",
"PTPRQ",
"RCVRN",
"CSNK2A3",
"RNF150",
"SCGB1C1",
"NLE1",
"PIGV",
"ARHGAP11B",
"PHF13",
"FPR3",
"MINDY1",
"TXNRD1",
"GPHB5",
"JAKMIP2",
"GSTT1",
"ACTN3",
"CISD3",
"ZNF571",
"PSMD11",
"PPEF1",
"CYP26B1",
"PTPRJ",
"PDE6C",
"GGTLC1",
"NXPH1",
"FERD3L",
"PER3",
"TCP11L1",
"FUCA2",
"NDUFA4L2",
"CLDN5",
"NRN1",
"OR2A9P",
"MIR1224",
"IL18RAP",
"IGLL3P",
"RAB11FIP5",
"SPNS1",
"GRHPR",
"CLEC14A",
"KANSL1L",
"SNORD113-4",
"TBRG1",
"PTCHD3",
"CRABP2",
"ARL11",
"MAGI1",
"STAT1",
"GAS1",
"TATDN1",
"RRP7A",
"CYB5R2",
"CYBB",
"SPECC1",
"VEGFA",
"ZNF821",
"GPRC5B",
"MYL9",
"ARHGAP22",
"CCDC121",
"TPPP3",
"PEX6",
"DCP1B",
"OTOR",
"MVK",
"AK3",
"RASSF3",
"DGKH",
"KLHL17",
"TRIM62",
"TLCD3B",
"ZFY",
"EFCAB12",
"LDLR",
"EPS8L3",
"LHFPL1",
"ABHD1",
"MYO16",
"PPT2",
"COL9A1",
"CDC42SE1",
"SPESP1",
"IFFO1",
"ZNF597",
"MREG",
"EME1",
"REPS1",
"LRRC75A",
"EGOT",
"AKIP1",
"ZBTB41",
"ANAPC2",
"GLS2",
"FBP1",
"UBE2L6",
"KDM1B",
"INSM1",
"MIR542",
"SLC39A14",
"CLEC4C",
"LGALS2",
"LYPD4",
"PLXNA2",
"LMCD1",
"ADAM28",
"WDR55",
"MICB",
"FAM86DP"
],
"Coefficient": [
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"Absolute Coefficient": [
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]
},
"cv_performance": {
"prediction": {
"accuracy": 76.09756097560975,
"precision": 54.0,
"recall": 40.74475524475524,
"f1": 46.042799305957196
},
"selection": {
"precision": 2.636558906701142,
"recall": 2.3,
"f1": 2.456010092566577,
"jaccard": 1.2446294320865334
}
}
}