GenoTEX / p3 /regress /Fibromyalgia /significant_genes_condition_Anxiety_disorder.json
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{
"significant_genes": {
"Variable": [
"ANKRD20A11P",
"LTA4H",
"CCDC170",
"PARD3B",
"ENC1",
"MIR9-1",
"NEIL1",
"HLA-L",
"FAM24A",
"MFSD3",
"LCT",
"NDC1",
"STXBP1",
"HTN1",
"ITSN1",
"CADPS",
"PGM5P2",
"ELAPOR1",
"OR1N1",
"IFT122",
"KAT2B",
"NUDC",
"TMEM255B",
"IFNE",
"HLA-DQB1",
"BLVRA",
"AKAP12",
"FAM167A-AS1",
"TTLL7",
"IL13",
"MDS2",
"DCPS",
"RGS17",
"APBB2",
"GSDME",
"OR10A7",
"UQCC3",
"TXNDC11",
"MARCHF8",
"MYH1",
"CPT1A",
"CYP27A1",
"VWA5B2",
"NAPSB",
"ATOH8",
"SCG3",
"SLC25A34",
"IL3RA",
"CCNI",
"ITGB8",
"MMP12",
"POC1A",
"COL4A6",
"TNKS1BP1",
"ICA1L",
"ELL3",
"HLA-DPB2",
"RDH5",
"DERL3",
"LRRC43",
"JAKMIP3",
"SPHK1",
"LINC00272",
"HTN3",
"LINC02912",
"PTP4A3",
"MST1",
"CYP26B1",
"C1orf174",
"MRPL38",
"RRH",
"CPA3",
"CFAP53",
"AFAP1L2",
"CCDC146",
"HTR3B",
"TXNDC8",
"ECRG4",
"PIDD1",
"EBI3",
"C14orf93",
"TBX6",
"KIAA1656",
"OSGIN1",
"MCAM",
"MROH8",
"TTC41P",
"CROCC",
"HMGN2P46",
"SMAD9",
"LRIG3",
"DVL2",
"MTNR1B",
"TRPM4",
"DRICH1",
"DOCK3",
"RAB11FIP3",
"F7",
"NOVA1",
"LGI4",
"LRRC23",
"PTGDS",
"TPO",
"DEFB119",
"EHHADH",
"EWSAT1",
"MFSD4A",
"C9orf40",
"ZNF620",
"RNF17",
"FKBPL",
"LYG1",
"SEMA3A",
"NEFL",
"CDS1",
"CCR9",
"TGFB2",
"CD93",
"HPCAL4",
"TCEAL1",
"APIP",
"CLLU1",
"COA1",
"KTN1-AS1",
"JOSD2",
"SCARNA8",
"NBPF22P",
"STAR",
"ATP2B3"
],
"Coefficient": [
-0.06610174146599611,
0.06601024386309777,
0.059381969780775125,
0.05338432632440249,
-0.04845565942283187,
0.04766811726183117,
0.047525428728989946,
0.047008862102678774,
0.045229996981148074,
-0.04478656818281971,
0.04125989654324132,
0.04083091868939823,
0.039500972918954866,
0.03853815698129216,
-0.037978212337341166,
-0.036927912090816375,
-0.03682321527078067,
0.03591048554090576,
0.03590009329850322,
0.035501165131595534,
0.030855039131042674,
0.03025796796769963,
-0.029936705769890066,
0.028742231092315534,
0.028539846483369442,
-0.028286126263694183,
-0.026736046395541977,
0.02668729398248783,
-0.02634514420018028,
0.02564816373303426,
0.024990794178737633,
-0.024903152039555333,
0.02242841861850339,
0.021522012904317024,
0.020943723350057116,
0.020893211433795095,
-0.020752366558574938,
-0.020567624588642457,
0.02045895814015873,
-0.02006003823631315,
0.01999437288794419,
0.019891941920975945,
-0.01974814672618711,
-0.018917987710856867,
0.017582144730984964,
-0.017364311215672987,
0.01668609891910436,
-0.016580599412162753,
0.01648780504283351,
-0.016345694710731613,
0.016259238543870565,
0.015785497568206377,
0.015677147692672186,
-0.014836419098754857,
-0.014589866523053184,
0.014575482558815096,
0.014474276732072092,
0.014234908076724269,
-0.01354383627360538,
0.013351195029706003,
0.01326394071488049,
0.013111186845552477,
0.01284328200558181,
-0.012692319525593812,
0.012137927737652168,
-0.011809062330337142,
0.011337287390924862,
-0.011323446781913358,
0.011314950597069235,
0.011274504705329223,
-0.010859804296415311,
-0.010558806636001138,
-0.010234558143153927,
-0.009919849066093483,
-0.00985291022239699,
-0.009493516298479823,
-0.009340756994970365,
-0.009178437658239204,
0.009081065014310465,
-0.009040641884087921,
-0.008831534446494751,
0.008684025889264002,
0.008657301795518756,
-0.008514913130335228,
-0.008415043598122627,
-0.008408123814281286,
-0.00827712732060034,
0.008275198060545389,
0.008182948633283334,
-0.008072095395791654,
0.008060600031169696,
-0.00804149161524077,
-0.0078975306728361,
0.007630104941572522,
0.007608660530784504,
0.00746096000561545,
0.007165724723397438,
0.007040632586203877,
0.007040463331201672,
-0.006142500425539261,
-0.00612448234035878,
-0.005976456956874136,
0.005815681449277069,
0.00542387351974836,
0.005280752301695323,
-0.005101183193838905,
0.004241886542386859,
0.004204124026952266,
-0.004151181321813307,
-0.004066360374743626,
0.002876616411224342,
0.002487946600645846,
0.002467478013182406,
0.0021428131819516377,
0.0021023118770362257,
-0.0018631035452586768,
-0.0016829443603948563,
0.001560559308550219,
0.0015404669137632462,
-0.001384990378857489,
0.0013005795921075122,
-0.0012605819320739167,
0.0010629383826289793,
-0.0009838559264504045,
0.0009039436380858331,
-0.0005588144762731445,
-0.0005361559070919907,
0.0001547437317224614,
8.787091108748017e-07
],
"Absolute Coefficient": [
0.06610174146599611,
0.06601024386309777,
0.059381969780775125,
0.05338432632440249,
0.04845565942283187,
0.04766811726183117,
0.047525428728989946,
0.047008862102678774,
0.045229996981148074,
0.04478656818281971,
0.04125989654324132,
0.04083091868939823,
0.039500972918954866,
0.03853815698129216,
0.037978212337341166,
0.036927912090816375,
0.03682321527078067,
0.03591048554090576,
0.03590009329850322,
0.035501165131595534,
0.030855039131042674,
0.03025796796769963,
0.029936705769890066,
0.028742231092315534,
0.028539846483369442,
0.028286126263694183,
0.026736046395541977,
0.02668729398248783,
0.02634514420018028,
0.02564816373303426,
0.024990794178737633,
0.024903152039555333,
0.02242841861850339,
0.021522012904317024,
0.020943723350057116,
0.020893211433795095,
0.020752366558574938,
0.020567624588642457,
0.02045895814015873,
0.02006003823631315,
0.01999437288794419,
0.019891941920975945,
0.01974814672618711,
0.018917987710856867,
0.017582144730984964,
0.017364311215672987,
0.01668609891910436,
0.016580599412162753,
0.01648780504283351,
0.016345694710731613,
0.016259238543870565,
0.015785497568206377,
0.015677147692672186,
0.014836419098754857,
0.014589866523053184,
0.014575482558815096,
0.014474276732072092,
0.014234908076724269,
0.01354383627360538,
0.013351195029706003,
0.01326394071488049,
0.013111186845552477,
0.01284328200558181,
0.012692319525593812,
0.012137927737652168,
0.011809062330337142,
0.011337287390924862,
0.011323446781913358,
0.011314950597069235,
0.011274504705329223,
0.010859804296415311,
0.010558806636001138,
0.010234558143153927,
0.009919849066093483,
0.00985291022239699,
0.009493516298479823,
0.009340756994970365,
0.009178437658239204,
0.009081065014310465,
0.009040641884087921,
0.008831534446494751,
0.008684025889264002,
0.008657301795518756,
0.008514913130335228,
0.008415043598122627,
0.008408123814281286,
0.00827712732060034,
0.008275198060545389,
0.008182948633283334,
0.008072095395791654,
0.008060600031169696,
0.00804149161524077,
0.0078975306728361,
0.007630104941572522,
0.007608660530784504,
0.00746096000561545,
0.007165724723397438,
0.007040632586203877,
0.007040463331201672,
0.006142500425539261,
0.00612448234035878,
0.005976456956874136,
0.005815681449277069,
0.00542387351974836,
0.005280752301695323,
0.005101183193838905,
0.004241886542386859,
0.004204124026952266,
0.004151181321813307,
0.004066360374743626,
0.002876616411224342,
0.002487946600645846,
0.002467478013182406,
0.0021428131819516377,
0.0021023118770362257,
0.0018631035452586768,
0.0016829443603948563,
0.001560559308550219,
0.0015404669137632462,
0.001384990378857489,
0.0013005795921075122,
0.0012605819320739167,
0.0010629383826289793,
0.0009838559264504045,
0.0009039436380858331,
0.0005588144762731445,
0.0005361559070919907,
0.0001547437317224614,
8.787091108748017e-07
]
},
"cv_performance": {
"prediction": {
"accuracy": 69.28571428571429,
"precision": 67.2877122877123,
"recall": 64.87012987012986,
"f1": 65.91848151848151
},
"selection": {
"precision": 0.1904761904761905,
"recall": 0.5128205128205128,
"f1": 0.2777777777777778,
"jaccard": 0.13986013986013984
}
}
}