GenoTEX / p3 /regress /Fibromyalgia /significant_genes_condition_Huntingtons_Disease.json
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{
"significant_genes": {
"Variable": [
"MFSD3",
"CCDC170",
"ANKRD20A11P",
"TTLL7",
"LTA4H",
"ENC1",
"ELAPOR1",
"PIDD1",
"NUDC",
"APBB2",
"PIK3R2",
"GUK1",
"DEFB119",
"G0S2",
"TMEM255B",
"NEFL",
"MIR9-1",
"COL4A6",
"MDS2",
"DCPS",
"CCR9",
"FAM24A",
"PARD3B",
"MROH8",
"PTP4A3",
"OR10A7",
"FAM167A-AS1",
"IL10",
"IL3RA",
"ATOH8",
"HLA-L",
"DNAI7",
"TBX6",
"HLA-DPB2",
"CEND1",
"KIAA1656",
"ZNF20",
"AKAP12",
"NEIL1",
"GSDME",
"ICA1L",
"PGM5P2",
"SH3D19",
"LGI4",
"PALLD",
"SCG3",
"ADCK1",
"HLA-DRB5",
"MRPL38",
"CLXN",
"HLA-DQB1",
"FOXRED1",
"ELL3",
"LRRC43",
"DERL3",
"HAND2",
"C3orf20",
"EWSAT1",
"JAKMIP3",
"SERPINC1",
"MTNR1B",
"HTN1",
"H2BC3",
"MCAM",
"ZBTB7C-AS2",
"TCEAL1",
"NYAP2",
"GRK7",
"TLE6",
"MYLIP",
"TGFB2",
"SLC38A8",
"CCNA1",
"CROCC",
"RAB11FIP3",
"CD300LD-AS1",
"RNF17",
"SIRT4",
"SLC7A11",
"ZNF648",
"TAFA1",
"DVL2",
"CACNB2",
"PPP1R13L",
"LYG1",
"LRRC23",
"VWA5B2",
"RGS17",
"POC1A",
"CYP27A1",
"IL31RA",
"STXBP1",
"SNORD113-4",
"MFSD9",
"TXNDC8",
"MFSD4A",
"HLA-DQB2",
"TUBB6",
"MIR205",
"GFAP",
"ZNHIT1",
"AFAP1L2",
"MILR1",
"AREG",
"RDH5",
"LRGUK",
"OR4A16",
"NBPF22P",
"CCL8",
"NAPSA",
"SIGLEC14",
"LCT",
"FKBP9",
"IFNE",
"PSMA8",
"CPA3",
"C1orf174",
"DRICH1",
"OR2A20P",
"SCGB2A1",
"SLC1A1",
"IL31",
"TXNDC11",
"CCNI",
"CSPG4P5",
"ICAM1",
"CHGB",
"MIR140",
"OR8U1",
"FAM83B",
"MT1L",
"CPT1A",
"NECAB3",
"ZNF625",
"MIR205HG",
"OR2A9P",
"OR8U8"
],
"Coefficient": [
-0.06464567721237992,
0.0525741887456915,
-0.051294505782850504,
-0.04757542252451818,
0.044906432257055984,
-0.04389261442020014,
0.04240917408830002,
0.041934437193215685,
0.04119817801224342,
0.040434189087267654,
0.04034046642892017,
0.03897592966557891,
0.0388589335834545,
-0.038580363305672376,
-0.035941357027683085,
0.034956105328112795,
0.033879420433732634,
0.033788020448592505,
0.03360770062668903,
-0.033249329156547526,
-0.033167408087067134,
0.03316061694600316,
0.033108866882462354,
-0.032144921486849824,
-0.032051970662509095,
0.0313471106884034,
0.030052457371960228,
0.029998032090770718,
-0.027753462521928063,
0.027453242480597634,
0.026007152372096328,
-0.025799115803886077,
0.025092313241251638,
0.02464836470508332,
-0.02419340606249715,
0.02400360744462694,
-0.02361961670592147,
-0.022771064850195,
0.022663035745685327,
0.02247434511954765,
-0.020624118785453702,
-0.01998497681990716,
0.01946970578297883,
-0.01915798844236569,
-0.01915771148966777,
-0.018418791976951607,
0.018320218856181097,
0.017823896333119923,
0.017040081930797715,
0.01675552423672206,
0.016675080240857634,
0.015374717232950294,
0.01532765583200218,
0.015031608190599411,
-0.01499469255263345,
0.014459361692394826,
-0.014260618383254152,
-0.01421248567402429,
0.013546191127825227,
-0.01341244896394702,
-0.012261410209924781,
0.012061075264547241,
-0.011683475534905466,
-0.011636947495380587,
-0.010790301727009614,
-0.010746875343627558,
0.010419347593328824,
0.010359844571618206,
-0.010281646353649728,
-0.009428808286741126,
-0.009398363300593477,
-0.00910013358347196,
-0.008775742507013119,
0.008255821737107729,
0.008147895498608886,
0.00796573076949832,
-0.007777623773709828,
-0.007526820934557353,
-0.007433930183865981,
-0.007310342514854148,
0.007263156148225171,
-0.006835965430350124,
-0.006757988225019616,
-0.006723569828859168,
0.006662698500405024,
-0.0065819819541855454,
-0.006483445358735372,
0.006378586487072869,
0.006185390908694995,
0.005620261700476328,
-0.005536924884868195,
0.005327864010908522,
0.004867215579760791,
-0.004845487991185503,
-0.004790626140139559,
0.004578601056024272,
0.004298499696122296,
0.004226947223737125,
0.003990477707976837,
-0.003948303387149503,
0.003870553034635095,
-0.003704761649336075,
-0.0037030989755259254,
-0.0035931124881179726,
0.0035176099728761777,
0.0034983712292107763,
-0.0034817865292932604,
-0.003389475608901872,
-0.003319898254441981,
-0.0032093332246740797,
-0.0031267655701399336,
0.003030972985333818,
-0.0029212381134770247,
0.0028799373267657607,
0.002765311184454902,
-0.0027504760265619783,
0.002670801648841287,
0.002533852325715678,
-0.0019279973740694474,
-0.0019195660950914928,
-0.0017779763759769058,
-0.0017572296069209793,
-0.0017152106153142626,
0.0015008584947026435,
0.001374931783050125,
-0.0007544296630530328,
-0.0007543692324926914,
-0.00037187525120712354,
-0.0002748504159690622,
9.09368264153055e-05,
6.865938729358125e-05,
4.963544920868448e-05,
-2.1415850909409042e-05,
-9.694905285459118e-17,
5.472930403081758e-17,
-5.472930403081758e-17,
-2.5019110414088035e-17
],
"Absolute Coefficient": [
0.06464567721237992,
0.0525741887456915,
0.051294505782850504,
0.04757542252451818,
0.044906432257055984,
0.04389261442020014,
0.04240917408830002,
0.041934437193215685,
0.04119817801224342,
0.040434189087267654,
0.04034046642892017,
0.03897592966557891,
0.0388589335834545,
0.038580363305672376,
0.035941357027683085,
0.034956105328112795,
0.033879420433732634,
0.033788020448592505,
0.03360770062668903,
0.033249329156547526,
0.033167408087067134,
0.03316061694600316,
0.033108866882462354,
0.032144921486849824,
0.032051970662509095,
0.0313471106884034,
0.030052457371960228,
0.029998032090770718,
0.027753462521928063,
0.027453242480597634,
0.026007152372096328,
0.025799115803886077,
0.025092313241251638,
0.02464836470508332,
0.02419340606249715,
0.02400360744462694,
0.02361961670592147,
0.022771064850195,
0.022663035745685327,
0.02247434511954765,
0.020624118785453702,
0.01998497681990716,
0.01946970578297883,
0.01915798844236569,
0.01915771148966777,
0.018418791976951607,
0.018320218856181097,
0.017823896333119923,
0.017040081930797715,
0.01675552423672206,
0.016675080240857634,
0.015374717232950294,
0.01532765583200218,
0.015031608190599411,
0.01499469255263345,
0.014459361692394826,
0.014260618383254152,
0.01421248567402429,
0.013546191127825227,
0.01341244896394702,
0.012261410209924781,
0.012061075264547241,
0.011683475534905466,
0.011636947495380587,
0.010790301727009614,
0.010746875343627558,
0.010419347593328824,
0.010359844571618206,
0.010281646353649728,
0.009428808286741126,
0.009398363300593477,
0.00910013358347196,
0.008775742507013119,
0.008255821737107729,
0.008147895498608886,
0.00796573076949832,
0.007777623773709828,
0.007526820934557353,
0.007433930183865981,
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0.006835965430350124,
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0.006662698500405024,
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0.006483445358735372,
0.006378586487072869,
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0.004298499696122296,
0.004226947223737125,
0.003990477707976837,
0.003948303387149503,
0.003870553034635095,
0.003704761649336075,
0.0037030989755259254,
0.0035931124881179726,
0.0035176099728761777,
0.0034983712292107763,
0.0034817865292932604,
0.003389475608901872,
0.003319898254441981,
0.0032093332246740797,
0.0031267655701399336,
0.003030972985333818,
0.0029212381134770247,
0.0028799373267657607,
0.002765311184454902,
0.0027504760265619783,
0.002670801648841287,
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0.0019279973740694474,
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0.0017779763759769058,
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0.0017152106153142626,
0.0015008584947026435,
0.001374931783050125,
0.0007544296630530328,
0.0007543692324926914,
0.00037187525120712354,
0.0002748504159690622,
9.09368264153055e-05,
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9.694905285459118e-17,
5.472930403081758e-17,
5.472930403081758e-17,
2.5019110414088035e-17
]
},
"cv_performance": {
"prediction": {
"accuracy": 64.28571428571429,
"precision": 61.898395721925134,
"recall": 70.97402597402598,
"f1": 65.47333318386123
},
"selection": {
"precision": 0.5909562918908714,
"recall": 1.5384615384615383,
"f1": 0.8536827476672622,
"jaccard": 0.4320486815415821
}
}
}