GenoTEX / p3 /regress /Fibromyalgia /significant_genes_condition_None.json
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{
"significant_genes": {
"Variable": [
"ANKRD20A11P",
"LTA4H",
"CCDC170",
"PARD3B",
"ENC1",
"NEIL1",
"MIR9-1",
"HLA-L",
"FAM24A",
"MFSD3",
"LCT",
"NDC1",
"STXBP1",
"HTN1",
"ITSN1",
"IFT122",
"PGM5P2",
"CADPS",
"OR1N1",
"ELAPOR1",
"KAT2B",
"TMEM255B",
"NUDC",
"AKAP12",
"HLA-DQB1",
"FAM167A-AS1",
"TTLL7",
"IFNE",
"BLVRA",
"IL13",
"DCPS",
"RGS17",
"MDS2",
"TXNDC11",
"APBB2",
"GSDME",
"CYP27A1",
"VWA5B2",
"MARCHF8",
"CPT1A",
"MYH1",
"OR10A7",
"UQCC3",
"NAPSB",
"ATOH8",
"MMP12",
"CCNI",
"SLC25A34",
"SCG3",
"POC1A",
"IL3RA",
"ELL3",
"TNKS1BP1",
"ITGB8",
"COL4A6",
"RDH5",
"HLA-DPB2",
"SPHK1",
"PTP4A3",
"DERL3",
"LRRC43",
"JAKMIP3",
"LINC02912",
"HTN3",
"CYP26B1",
"ICA1L",
"CFAP53",
"MST1",
"MRPL38",
"RRH",
"C1orf174",
"LINC00272",
"AFAP1L2",
"TXNDC8",
"TBX6",
"DRICH1",
"LRIG3",
"CPA3",
"CCDC146",
"C14orf93",
"KIAA1656",
"MROH8",
"SMAD9",
"OSGIN1",
"ECRG4",
"F7",
"CROCC",
"HTR3B",
"EBI3",
"MCAM",
"MTNR1B",
"TRPM4",
"PIDD1",
"DVL2",
"DOCK3",
"LRRC23",
"TPO",
"LGI4",
"TTC41P",
"NOVA1",
"HMGN2P46",
"EHHADH",
"DEFB119",
"PTGDS",
"EWSAT1",
"RAB11FIP3",
"RNF17",
"CDS1",
"C9orf40",
"MFSD4A",
"THOC3",
"ZNF620",
"NEFL",
"FKBPL",
"CLLU1",
"CD93",
"TGFB2",
"LYG1",
"TCEAL1",
"SEMA3A",
"CCR9",
"HPCAL4",
"SCARNA8",
"KTN1-AS1",
"PALLD",
"FOXRED1",
"JOSD2",
"COA1"
],
"Coefficient": [
-0.06658687453007676,
0.06382339160705983,
0.061044771594826554,
0.05392854883523683,
-0.05082436365307486,
0.04787535059999556,
0.047634909130400596,
0.0467324603628479,
0.043985187798912494,
-0.043170910185393235,
0.04220557230036941,
0.041007228574037394,
0.040096098108521286,
0.038865384348068355,
-0.03794139104370419,
0.03711417327326841,
-0.0366229212210422,
-0.03560305730067358,
0.03550968816106133,
0.03537074030479273,
0.03225233610534598,
-0.03029689129019743,
0.02990162845599945,
-0.02838071117745095,
0.028235097405237056,
0.02810607849974644,
-0.02770340988867838,
0.027572620936668978,
-0.025860942514897567,
0.02520039936420688,
-0.024602165337208506,
0.02407144623748026,
0.02306016847050885,
-0.022567646360128136,
0.02157618513699736,
0.02113126676809766,
0.02059358445394454,
-0.02038481932054102,
0.020350103643223084,
0.020299451123772478,
-0.02026192385267535,
0.02008097801992566,
-0.020052674081059072,
-0.019855898119059637,
0.017672169744332267,
0.017066594255050048,
0.017053565524181812,
0.016590879610542657,
-0.016363331249354615,
0.01630413912115682,
-0.01613705579519883,
0.01597059213841167,
-0.015918179943350517,
-0.015361480779547014,
0.015080522088432535,
0.014819519949193944,
0.013905755520894866,
0.013800850789233567,
-0.013550831395977257,
-0.013252558450033276,
0.01315533869823912,
0.013070122943768867,
0.012890981167811627,
-0.012874330893117897,
-0.012618775717849421,
-0.012602761709796967,
-0.012057385528096893,
0.01132318770568019,
0.011174301508950494,
-0.0109150594486337,
0.010724940237533398,
0.010646314293023719,
-0.010167970137779796,
-0.009904970880815721,
0.009825783132209899,
0.009773627948709507,
0.00950340766047298,
-0.009323117242488452,
-0.008869321072596035,
-0.008710719653161284,
0.008696374691283612,
-0.008644710865659976,
-0.00817533363725658,
-0.008173343351044365,
-0.008096612944205201,
0.0080535589396633,
0.007924380811869788,
-0.007853275673233207,
-0.007756016353695527,
-0.007725356452032434,
-0.007715955388598844,
0.0076204199645104045,
0.007573209328913664,
-0.007333347872283674,
0.007128392238224111,
-0.006856415025210234,
0.006676930745542062,
-0.00662114506335283,
-0.0065258615480466246,
0.00648566472789519,
0.00635605027350887,
0.006327373805865516,
0.006233571832908558,
-0.006228661606333122,
-0.005511784785155632,
0.005029881373499242,
-0.004321604759476841,
0.0034933032962603,
0.003160861835850944,
0.003104371373287412,
0.0028064433441695675,
-0.0027432719463635433,
0.002249932458851134,
0.0022483333716550266,
-0.0021817040540719535,
0.002118356337598462,
-0.001993590615899167,
0.0019268601894946184,
-0.0018684987837408135,
0.0017219355237537595,
-0.0016715336190890207,
0.001636345259827031,
-0.0010951622485301665,
-0.0004651432439401447,
-0.00028719820066503023,
0.00015772053119553951,
0.00014234203169376139,
5.059781101490746e-05
],
"Absolute Coefficient": [
0.06658687453007676,
0.06382339160705983,
0.061044771594826554,
0.05392854883523683,
0.05082436365307486,
0.04787535059999556,
0.047634909130400596,
0.0467324603628479,
0.043985187798912494,
0.043170910185393235,
0.04220557230036941,
0.041007228574037394,
0.040096098108521286,
0.038865384348068355,
0.03794139104370419,
0.03711417327326841,
0.0366229212210422,
0.03560305730067358,
0.03550968816106133,
0.03537074030479273,
0.03225233610534598,
0.03029689129019743,
0.02990162845599945,
0.02838071117745095,
0.028235097405237056,
0.02810607849974644,
0.02770340988867838,
0.027572620936668978,
0.025860942514897567,
0.02520039936420688,
0.024602165337208506,
0.02407144623748026,
0.02306016847050885,
0.022567646360128136,
0.02157618513699736,
0.02113126676809766,
0.02059358445394454,
0.02038481932054102,
0.020350103643223084,
0.020299451123772478,
0.02026192385267535,
0.02008097801992566,
0.020052674081059072,
0.019855898119059637,
0.017672169744332267,
0.017066594255050048,
0.017053565524181812,
0.016590879610542657,
0.016363331249354615,
0.01630413912115682,
0.01613705579519883,
0.01597059213841167,
0.015918179943350517,
0.015361480779547014,
0.015080522088432535,
0.014819519949193944,
0.013905755520894866,
0.013800850789233567,
0.013550831395977257,
0.013252558450033276,
0.01315533869823912,
0.013070122943768867,
0.012890981167811627,
0.012874330893117897,
0.012618775717849421,
0.012602761709796967,
0.012057385528096893,
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0.0109150594486337,
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0.010646314293023719,
0.010167970137779796,
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0.009773627948709507,
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0.008869321072596035,
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0.008696374691283612,
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0.008173343351044365,
0.008096612944205201,
0.0080535589396633,
0.007924380811869788,
0.007853275673233207,
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0.007725356452032434,
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0.0076204199645104045,
0.007573209328913664,
0.007333347872283674,
0.007128392238224111,
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0.006676930745542062,
0.00662114506335283,
0.0065258615480466246,
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0.00635605027350887,
0.006327373805865516,
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0.006228661606333122,
0.005511784785155632,
0.005029881373499242,
0.004321604759476841,
0.0034933032962603,
0.003160861835850944,
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0.0028064433441695675,
0.0027432719463635433,
0.002249932458851134,
0.0022483333716550266,
0.0021817040540719535,
0.002118356337598462,
0.001993590615899167,
0.0019268601894946184,
0.0018684987837408135,
0.0017219355237537595,
0.0016715336190890207,
0.001636345259827031,
0.0010951622485301665,
0.0004651432439401447,
0.00028719820066503023,
0.00015772053119553951,
0.00014234203169376139,
5.059781101490746e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 67.85714285714286,
"precision": 65.34265734265735,
"recall": 64.87012987012986,
"f1": 64.97774919843884
},
"selection": {
"precision": 0.19230769230769232,
"recall": 0.5128205128205128,
"f1": 0.2797202797202797,
"jaccard": 0.14084507042253522
}
}
}