GenoTEX / output /regress /Depression /significant_genes_condition_Age.json
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{
"significant_genes": {
"Variable": [
"MRI1",
"TMEM45A",
"KRTAP21-1",
"BSPRY",
"SYNM",
"CTD-2639E6",
"CAV2",
"SYCP2L",
"EFNB2",
"C10orf113",
"DNER",
"CASC5",
"NTPCR",
"TMEM242",
"TRBV27",
"CNGA3",
"LILRA3",
"RNF175",
"IFRD2",
"FIBIN",
"VNN1",
"PTGFRN",
"GSDMB",
"RNASE3",
"RP11-1L12",
"LCE1B",
"CST9L",
"TSHB",
"ERMAP",
"TSIX",
"RALY-AS1",
"HERC2P3",
"CAND2",
"C20orf85",
"RPH3A",
"RAVER1",
"C1orf54",
"HEXDC",
"RAPGEF4",
"CEACAM21",
"BCO2",
"VSIG10",
"C17orf99",
"SLC24A1",
"SIGLECL1",
"CFD",
"TADA2A",
"CXCL8",
"PCDHB5",
"FOXD2",
"FAM24A",
"ZG16B",
"GSG2",
"MMACHC",
"ZNF625",
"TMEM62",
"RP4-564F22",
"KRT8P17",
"LTC4S",
"RP11-796E2",
"DQ592442",
"TAS2R45",
"CLEC3A",
"EFCAB11",
"POLQ",
"NRG1-IT1",
"AC124997",
"CKAP2",
"BRS3",
"CELSR2",
"RGL1",
"LPL",
"C1orf101",
"ADRA2A",
"TDRD5",
"NBPF3",
"LTF",
"GPR1-AS",
"LECT2",
"LRRTM2",
"TEF",
"ADAM23",
"SPATS2L",
"BC047644",
"CDKN2B-AS1",
"AK055967",
"RMDN3",
"HIATL2",
"ACTR3P2",
"TXLNB",
"ARHGEF26",
"NUSAP1",
"AX746690",
"PEX11A",
"BUB1B",
"FADS1",
"TTLL5",
"BPIFB2",
"TRIB3",
"CHRNA5",
"MIR1908",
"SMIM12",
"KRT77",
"COL9A1",
"TRAV25",
"AJ011981",
"USP30-AS1",
"NGFRAP1",
"UBA52",
"PTPDC1",
"DQ582785",
"SLCO2A1",
"ACP5",
"FCER1G"
],
"Coefficient": [
-0.07365366951588236,
0.06765780492209526,
0.0672311594804554,
0.06182059969004951,
0.06102774702929804,
-0.0557130420102918,
-0.05297847860096931,
-0.05101898202300918,
0.04926981299266582,
-0.046850989697456935,
0.04412225043331514,
-0.04351659330412843,
0.04298300325991195,
0.041001511430594835,
-0.04026711747185501,
-0.03947459678944795,
-0.03927058603072537,
-0.033689005125165365,
-0.03258834755693612,
0.031624799138311385,
0.03051368342171608,
0.029972490512881967,
-0.029912146034907494,
0.029874613599395503,
0.024439864482579007,
-0.024001404694660913,
-0.023628376605883458,
-0.023552540046515764,
0.022781612319730634,
0.022435581202150175,
0.02206308327860084,
0.021919104098544417,
-0.021807023103414855,
-0.021710371779340407,
-0.02167007351911552,
-0.021354750990363918,
-0.02068812241204484,
-0.020545214592051164,
0.01935930016342537,
0.01919093411693752,
0.019098271620094077,
-0.01906026757360653,
0.018817640957187836,
0.018407922157544495,
0.018312732662801916,
0.017108541909174154,
0.017024063519949072,
0.016742568454970925,
0.016407857680273957,
0.016369276608200672,
-0.015733760363944423,
-0.015441833253897475,
-0.014876695053354868,
0.014168097717521222,
-0.01343272168126382,
0.012444914744745917,
0.011862155698047477,
-0.011825074508827775,
0.0115848911556948,
-0.011534188414768533,
-0.010936003698883333,
-0.010699098416224729,
0.009553037534532053,
-0.00866246720919624,
-0.008415569513107365,
0.008393913603278848,
0.008353934313015423,
-0.007820439406057407,
-0.0073187302342438525,
0.006704062497276098,
0.0066763157453028,
-0.006352457906915682,
0.006304499334952609,
-0.006292278079841259,
-0.00626111548215848,
0.006249622397873252,
0.006220903577312653,
-0.006014262061166971,
-0.005941565198531041,
0.004138553726963595,
0.0038207360720008223,
0.003780273234474149,
0.003613173309263901,
0.0035358150615728496,
0.003411036965417432,
0.0033901103005479485,
-0.0033305273648566286,
-0.003208378075704877,
-0.003119323138206422,
-0.002912508098378529,
0.0025803734550429802,
0.002485278173998474,
0.0020798875632378386,
0.0019408543985621881,
0.0018806787399932383,
0.0018548422053750531,
0.0016972477182533724,
0.0014904331046496494,
0.0014292592158147836,
-0.0013493924499335015,
0.001174165133427135,
0.000895859340776283,
0.0008845923093701349,
0.0008233449190890745,
-0.0008167119809460835,
0.0007965281954048528,
-0.0007915928282377257,
-0.0007677357757379737,
0.000646182438097897,
0.0005570550786672583,
0.0003751980081362496,
-0.00032907735749869503,
-0.00018764888232874186,
-0.00018457164558513523
],
"Absolute Coefficient": [
0.07365366951588236,
0.06765780492209526,
0.0672311594804554,
0.06182059969004951,
0.06102774702929804,
0.0557130420102918,
0.05297847860096931,
0.05101898202300918,
0.04926981299266582,
0.046850989697456935,
0.04412225043331514,
0.04351659330412843,
0.04298300325991195,
0.041001511430594835,
0.04026711747185501,
0.03947459678944795,
0.03927058603072537,
0.033689005125165365,
0.03258834755693612,
0.031624799138311385,
0.03051368342171608,
0.029972490512881967,
0.029912146034907494,
0.029874613599395503,
0.024439864482579007,
0.024001404694660913,
0.023628376605883458,
0.023552540046515764,
0.022781612319730634,
0.022435581202150175,
0.02206308327860084,
0.021919104098544417,
0.021807023103414855,
0.021710371779340407,
0.02167007351911552,
0.021354750990363918,
0.02068812241204484,
0.020545214592051164,
0.01935930016342537,
0.01919093411693752,
0.019098271620094077,
0.01906026757360653,
0.018817640957187836,
0.018407922157544495,
0.018312732662801916,
0.017108541909174154,
0.017024063519949072,
0.016742568454970925,
0.016407857680273957,
0.016369276608200672,
0.015733760363944423,
0.015441833253897475,
0.014876695053354868,
0.014168097717521222,
0.01343272168126382,
0.012444914744745917,
0.011862155698047477,
0.011825074508827775,
0.0115848911556948,
0.011534188414768533,
0.010936003698883333,
0.010699098416224729,
0.009553037534532053,
0.00866246720919624,
0.008415569513107365,
0.008393913603278848,
0.008353934313015423,
0.007820439406057407,
0.0073187302342438525,
0.006704062497276098,
0.0066763157453028,
0.006352457906915682,
0.006304499334952609,
0.006292278079841259,
0.00626111548215848,
0.006249622397873252,
0.006220903577312653,
0.006014262061166971,
0.005941565198531041,
0.004138553726963595,
0.0038207360720008223,
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0.0035358150615728496,
0.003411036965417432,
0.0033901103005479485,
0.0033305273648566286,
0.003208378075704877,
0.003119323138206422,
0.002912508098378529,
0.0025803734550429802,
0.002485278173998474,
0.0020798875632378386,
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0.0016972477182533724,
0.0014904331046496494,
0.0014292592158147836,
0.0013493924499335015,
0.001174165133427135,
0.000895859340776283,
0.0008845923093701349,
0.0008233449190890745,
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0.0007965281954048528,
0.0007915928282377257,
0.0007677357757379737,
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0.0003751980081362496,
0.00032907735749869503,
0.00018764888232874186,
0.00018457164558513523
]
},
"cv_performance": {
"prediction": {
"accuracy": 73.33333333333334,
"precision": 74.73951048951048,
"recall": 72.0,
"f1": 73.24811897883427
},
"selection": {
"precision": 1.576470588235294,
"recall": 0.5387205387205387,
"f1": 0.8030150944110908,
"jaccard": 0.40429612581511315
}
}
}