GenoTEX / output /regress /Height /significant_genes_condition_None.json
Liu-Hy's picture
Add files using upload-large-folder tool
c5640bc verified
raw
history blame
23.8 kB
{
"significant_genes": {
"Variable": [
"ABCC3",
"AADACL3",
"ABCA15P",
"AADACL4",
"ABCA1",
"AADAC",
"AAMDC",
"ABCA9",
"A4GALT",
"ACP6",
"ABCC2",
"AATK",
"ABHD12B",
"ABCA2",
"AADACL2",
"ACTBP7",
"ABCA10",
"AARSD1",
"ADGRG4",
"ABCA12",
"ADCY1",
"AAGAB",
"ADAMTS10",
"ABCA8",
"AARD",
"ACAA2",
"AARS2",
"AASS",
"ABCC6",
"ABHD2",
"ADAM12",
"AMTN",
"ABCG1",
"AASDH",
"ACOXL",
"ABCF1",
"A4GNT",
"ADAM3A",
"ACOT12",
"ABCA13",
"ALKAL1",
"ACSM6",
"ABCC6P1",
"ABCA4",
"ACTR5",
"ANKDD1A",
"ACSS3",
"EFNA1",
"AFF2",
"ANKRD29",
"AKR1D1",
"ACYP2",
"ACAT2",
"ACKR3",
"ADAM2",
"ANKRD6",
"ACOT8",
"ADGRB2",
"ABTB2",
"ADAMTS1",
"ADGRE3",
"ADAMDEC1",
"ANGPTL7",
"FABP7",
"ACTR8",
"ADGRE4P",
"BPIFA2",
"ARPP21",
"ACP3",
"ACTN1",
"CLDN18",
"B3GALNT2",
"C14orf39",
"ACCSL",
"RNU6-867P",
"ANKRD13C-DT",
"ANKRD34B",
"ANOS2P",
"C11orf16",
"OR4D1",
"AAR2",
"CLDN10",
"AMZ2P1",
"AGR2",
"ACTA1",
"ACTA2-AS1",
"AGBL1",
"ACSM2A",
"A3GALT2",
"BIRC5",
"RN7SKP243",
"AHSA1",
"OR10R3P",
"AKR1E2",
"ADK",
"CRH",
"AHRR",
"ANKRD20A1",
"AAMP",
"ACKR4",
"CCR8",
"BAIAP2L1",
"AMACR",
"ACAD11",
"ABCD2",
"ACACB",
"NCKAP5",
"AK1",
"C5orf46",
"CDH10",
"ACTBP2",
"CLIC6",
"IFNA14",
"ALG2",
"CFAP97D1",
"ATP12A",
"ADCY4",
"ADD1",
"AGXT2",
"ACTR6",
"ANOS1",
"ADISSP",
"COLQ",
"INTS4P1",
"APOBEC3D",
"ARHGAP20",
"AMD1",
"ABAT",
"MYH15",
"ANGPTL6",
"ARHGAP17",
"CFAP126",
"AIFM1",
"ADGRV1",
"ADRB2",
"ACBD7",
"AKR1C2",
"CNTN5",
"APOA4",
"APIP",
"ABHD10",
"RNA5SP197",
"CA13",
"DMRT3",
"DUSP5P1",
"AIFM2",
"GALNT15",
"BMP2",
"ACOT1",
"CASQ2",
"ADGRF2P",
"CD34",
"MIR106A",
"ARHGEF40",
"ACOT9",
"AIM2",
"ATIC",
"GDF10",
"ACSF2",
"ADAMTSL1",
"ADGRG6",
"ADAMTS13",
"BEND6",
"CST9L",
"CA5BP1",
"AGBL4",
"AFG3L2",
"CYP4F11",
"CLEC9A",
"AKR1C1",
"ATP7B",
"AARS1",
"ASCL1",
"AMDHD1",
"HOXB1",
"CABCOCO1",
"ACTA2",
"BAALC-AS2",
"FUT10",
"TP53AIP1",
"AFM",
"GPR37",
"ABTB3",
"ARHGEF10",
"LTK",
"TAF5L",
"AKAP7",
"JPH1",
"ARHGEF15",
"ADRA1B",
"ADGRF5",
"ACTL10",
"C2orf66",
"ABCC4",
"ACBD4",
"ACSS2",
"CYP2C8",
"OPN1SW",
"ACP4",
"APOC1",
"GALNT16",
"ANKRD13A",
"ABRA",
"ADH1C",
"ASB9",
"CLDN16",
"AOX1",
"BTN3A3",
"BEST2",
"CDCA7",
"ACTL9",
"RN7SKP200",
"BFSP2",
"ADAM6",
"ACSL6",
"CCL1",
"KRT6B",
"ANKDD1B",
"IFNA7",
"BTN2A3P",
"ABHD1",
"KRT23",
"ANKRD13B",
"AGER",
"ATCAY",
"IL19",
"AIFM3",
"ANKRD18CP",
"GBP7",
"RN7SKP232",
"OR52A1",
"ANG",
"BCL6",
"CCDC136",
"HOXB5",
"EPCAM",
"ADRA1A",
"ALOX12P2",
"MLANA",
"HPN",
"CPN1",
"MSMB",
"RN7SL270P",
"CD300LD-AS1",
"OR8B12",
"ARHGAP19",
"ALDH1A3",
"ABCA3",
"RNU1-96P",
"ABCC6P2",
"ANKRD20A2P",
"INTS4P2",
"ANKRD20A3P"
],
"Coefficient": [
-0.04119645210465566,
-0.03187190657339849,
-0.02086484322908609,
-0.0201105750329443,
0.0187883000151709,
-0.016030646271591092,
-0.014868377855686038,
-0.01471251696758372,
0.011558103000607053,
0.011211454353704247,
-0.00965689869253017,
-0.009598769955232107,
-0.008911076375843225,
0.00884671077177263,
-0.007251180191195853,
0.007070379604036175,
-0.006999796548308154,
-0.006939791938187273,
-0.006735025334689834,
0.006667062838464859,
0.0064400063492361026,
-0.006098291881222332,
0.0058237934005859245,
0.005474867324371252,
0.005364680940975728,
-0.005304573597750471,
-0.005236797286655889,
-0.0051702127411221085,
0.00492160572213543,
-0.004893031878083489,
0.004815413481432258,
0.0047480490024227615,
0.004187484239706456,
-0.0041370769280942,
-0.004008863283966176,
-0.00394726871710008,
0.003907513191350515,
-0.003809615217642033,
-0.0036769924804597107,
-0.003636940174458183,
0.003420063223466596,
-0.0034123688926046662,
0.0033442115303603643,
0.0032085592995646788,
-0.0031093290148562483,
-0.0030226266198903366,
0.0028148727729966506,
-0.0028125648225448786,
0.00272635715517339,
0.0026972545036741914,
0.002626022372970075,
-0.002607668456077771,
-0.0025699054694741648,
0.0025656754617465628,
0.0024945257629995906,
0.0024718399690836688,
0.002421588140902826,
-0.0023847321963949893,
0.002325697222231903,
0.002296775665283684,
0.0022831977963152857,
0.002178529494576548,
0.002150283844405321,
0.002038155206059351,
-0.001944294438136095,
-0.0018484543556346951,
0.0018004471308090922,
0.0017835454747979272,
-0.0017370093959837279,
0.0016773622341751636,
0.0016204383769294437,
0.0016155714227415678,
-0.0016099832984355562,
0.001576215720816365,
-0.0015679229876110578,
-0.0014675032125442034,
0.00144972427472318,
0.00141315638016439,
-0.0014086010306708615,
-0.0013431814868360013,
-0.0011797404451732293,
0.0011575659665796084,
0.001138692470055375,
0.0011365724587378368,
0.001125694159286077,
-0.0011069288457687461,
-0.0010828702050609163,
-0.001072533144140385,
0.0010343951763688137,
-0.0009836581846154539,
-0.0009240240048007607,
-0.0008896449521952413,
0.00085910662981911,
0.0008542258176700304,
0.0008413737253429725,
-0.0008316901987649138,
-0.0008085124357767469,
0.0008040981713748616,
-0.0008005984612722133,
0.0007968240926399127,
-0.000795457414400913,
-0.0007921021594530283,
0.0007864848545896323,
-0.0007750907688674608,
-0.0007698946227294405,
0.0007111487553191172,
0.0006873664790719364,
-0.0006872569259025416,
0.0006598793992581463,
0.0006543124666935694,
0.0006290313122384406,
-0.000622065548953578,
-0.0006214321477664875,
-0.0006196581019378997,
-0.0006167153312759088,
0.0006125767327771043,
-0.0005926723372194367,
-0.0005915616057715989,
0.0005882682813932907,
-0.0005868776993994514,
0.0005861414833796213,
-0.0005668460959168019,
0.0005508298635211515,
0.0005423778032439072,
-0.0005396244437973709,
-0.000523518242205647,
0.0005173874156226309,
-0.00047590059501670406,
-0.0004687025238602878,
-0.00046491367178964877,
-0.00046411210889430333,
-0.0004577269249529999,
-0.00045084661968013937,
-0.00044697399058405584,
-0.00044018636772892556,
0.00043480493956575783,
0.0004325701071256348,
0.0004266428911671728,
0.00042619860984155847,
-0.0004253217836590078,
0.00041539018010147585,
-0.000404037797793044,
0.00039807016343105866,
0.0003868298678543014,
-0.00037338481399861075,
-0.0003701436853407817,
-0.00034627755163318225,
0.00034614986058711234,
0.00034486346668611797,
0.0003306735349893016,
0.000321607218033505,
0.00032084473896845547,
-0.0003108448791240374,
0.00030811125858417183,
-0.0003047157663291943,
-0.0002960453847931821,
-0.00029488172794961013,
-0.0002724747662916886,
-0.0002720554091480906,
0.00025717750534994265,
0.00025682791152025484,
0.0002547114048084399,
0.00024557235277367133,
-0.0002430827255217269,
-0.00024157324652188862,
0.0002311296282031076,
-0.00023043709787408834,
0.00022184444031108944,
0.00022087943686550693,
0.00021441138487487887,
0.00021352712695265667,
-0.00020605710626126253,
-0.0001974255881384415,
-0.00019555396297454383,
-0.00019145909208082227,
-0.00018814904352553965,
-0.00018162669508581215,
0.0001792472130152759,
-0.0001724727721207511,
-0.0001693039440441686,
0.00016724716807546214,
-0.00016556353636910457,
-0.00015980785766194898,
0.00015894168054451897,
0.00015801529277470182,
0.00014695963739721492,
-0.00014368664066797835,
-0.00014075097455343145,
-0.0001352572411127892,
0.00013423578924396867,
-0.00011880022358635894,
0.00011435435446380989,
-0.00011353085343319962,
-0.00010564870175248532,
0.00010518321471755336,
0.0001020219578082103,
9.83374508290382e-05,
8.783919522397288e-05,
8.42862807312301e-05,
8.411463100210346e-05,
-7.402598606784359e-05,
-7.345381452715124e-05,
7.255164632945455e-05,
-6.750176588623357e-05,
5.9758125197408084e-05,
-5.468913726437026e-05,
-5.196717735368077e-05,
-5.051943385268135e-05,
4.750670129136895e-05,
-4.3900620784693896e-05,
3.96721265639723e-05,
3.9371504137614195e-05,
3.858445232466212e-05,
3.698632654838705e-05,
3.6233315591465426e-05,
-3.6128835518807146e-05,
-3.388697295681027e-05,
-3.2096971869049016e-05,
-3.161071718290317e-05,
-3.035478879825145e-05,
2.9996259704357953e-05,
2.9768211544669464e-05,
-2.5965222352581676e-05,
2.581249756438056e-05,
-2.541172166624763e-05,
-2.4617238189206685e-05,
2.1824968874822897e-05,
1.4336489132781073e-05,
-1.4279793919642383e-05,
-1.25988263839688e-05,
-1.200207419822508e-05,
-9.050046803864312e-06,
7.665067976507404e-06,
-7.112810194369284e-06,
-7.065366025924115e-06,
6.228676678833624e-06,
4.076137633864285e-06,
3.705854185834439e-06,
-3.305506187296381e-06,
-3.253046301879979e-06,
3.0276655083169534e-06,
-2.701739965919122e-06,
-2.6254054630374506e-06,
2.0481736857345507e-06,
-1.924332860991469e-06,
-1.4677912640139225e-06,
-1.1629263253832845e-06,
8.203769827473e-07,
-7.516587262554354e-07,
6.10216087729154e-16,
2.4226497544188595e-17,
1.8621172312438543e-18,
5.692061405548899e-20
],
"Absolute Coefficient": [
0.04119645210465566,
0.03187190657339849,
0.02086484322908609,
0.0201105750329443,
0.0187883000151709,
0.016030646271591092,
0.014868377855686038,
0.01471251696758372,
0.011558103000607053,
0.011211454353704247,
0.00965689869253017,
0.009598769955232107,
0.008911076375843225,
0.00884671077177263,
0.007251180191195853,
0.007070379604036175,
0.006999796548308154,
0.006939791938187273,
0.006735025334689834,
0.006667062838464859,
0.0064400063492361026,
0.006098291881222332,
0.0058237934005859245,
0.005474867324371252,
0.005364680940975728,
0.005304573597750471,
0.005236797286655889,
0.0051702127411221085,
0.00492160572213543,
0.004893031878083489,
0.004815413481432258,
0.0047480490024227615,
0.004187484239706456,
0.0041370769280942,
0.004008863283966176,
0.00394726871710008,
0.003907513191350515,
0.003809615217642033,
0.0036769924804597107,
0.003636940174458183,
0.003420063223466596,
0.0034123688926046662,
0.0033442115303603643,
0.0032085592995646788,
0.0031093290148562483,
0.0030226266198903366,
0.0028148727729966506,
0.0028125648225448786,
0.00272635715517339,
0.0026972545036741914,
0.002626022372970075,
0.002607668456077771,
0.0025699054694741648,
0.0025656754617465628,
0.0024945257629995906,
0.0024718399690836688,
0.002421588140902826,
0.0023847321963949893,
0.002325697222231903,
0.002296775665283684,
0.0022831977963152857,
0.002178529494576548,
0.002150283844405321,
0.002038155206059351,
0.001944294438136095,
0.0018484543556346951,
0.0018004471308090922,
0.0017835454747979272,
0.0017370093959837279,
0.0016773622341751636,
0.0016204383769294437,
0.0016155714227415678,
0.0016099832984355562,
0.001576215720816365,
0.0015679229876110578,
0.0014675032125442034,
0.00144972427472318,
0.00141315638016439,
0.0014086010306708615,
0.0013431814868360013,
0.0011797404451732293,
0.0011575659665796084,
0.001138692470055375,
0.0011365724587378368,
0.001125694159286077,
0.0011069288457687461,
0.0010828702050609163,
0.001072533144140385,
0.0010343951763688137,
0.0009836581846154539,
0.0009240240048007607,
0.0008896449521952413,
0.00085910662981911,
0.0008542258176700304,
0.0008413737253429725,
0.0008316901987649138,
0.0008085124357767469,
0.0008040981713748616,
0.0008005984612722133,
0.0007968240926399127,
0.000795457414400913,
0.0007921021594530283,
0.0007864848545896323,
0.0007750907688674608,
0.0007698946227294405,
0.0007111487553191172,
0.0006873664790719364,
0.0006872569259025416,
0.0006598793992581463,
0.0006543124666935694,
0.0006290313122384406,
0.000622065548953578,
0.0006214321477664875,
0.0006196581019378997,
0.0006167153312759088,
0.0006125767327771043,
0.0005926723372194367,
0.0005915616057715989,
0.0005882682813932907,
0.0005868776993994514,
0.0005861414833796213,
0.0005668460959168019,
0.0005508298635211515,
0.0005423778032439072,
0.0005396244437973709,
0.000523518242205647,
0.0005173874156226309,
0.00047590059501670406,
0.0004687025238602878,
0.00046491367178964877,
0.00046411210889430333,
0.0004577269249529999,
0.00045084661968013937,
0.00044697399058405584,
0.00044018636772892556,
0.00043480493956575783,
0.0004325701071256348,
0.0004266428911671728,
0.00042619860984155847,
0.0004253217836590078,
0.00041539018010147585,
0.000404037797793044,
0.00039807016343105866,
0.0003868298678543014,
0.00037338481399861075,
0.0003701436853407817,
0.00034627755163318225,
0.00034614986058711234,
0.00034486346668611797,
0.0003306735349893016,
0.000321607218033505,
0.00032084473896845547,
0.0003108448791240374,
0.00030811125858417183,
0.0003047157663291943,
0.0002960453847931821,
0.00029488172794961013,
0.0002724747662916886,
0.0002720554091480906,
0.00025717750534994265,
0.00025682791152025484,
0.0002547114048084399,
0.00024557235277367133,
0.0002430827255217269,
0.00024157324652188862,
0.0002311296282031076,
0.00023043709787408834,
0.00022184444031108944,
0.00022087943686550693,
0.00021441138487487887,
0.00021352712695265667,
0.00020605710626126253,
0.0001974255881384415,
0.00019555396297454383,
0.00019145909208082227,
0.00018814904352553965,
0.00018162669508581215,
0.0001792472130152759,
0.0001724727721207511,
0.0001693039440441686,
0.00016724716807546214,
0.00016556353636910457,
0.00015980785766194898,
0.00015894168054451897,
0.00015801529277470182,
0.00014695963739721492,
0.00014368664066797835,
0.00014075097455343145,
0.0001352572411127892,
0.00013423578924396867,
0.00011880022358635894,
0.00011435435446380989,
0.00011353085343319962,
0.00010564870175248532,
0.00010518321471755336,
0.0001020219578082103,
9.83374508290382e-05,
8.783919522397288e-05,
8.42862807312301e-05,
8.411463100210346e-05,
7.402598606784359e-05,
7.345381452715124e-05,
7.255164632945455e-05,
6.750176588623357e-05,
5.9758125197408084e-05,
5.468913726437026e-05,
5.196717735368077e-05,
5.051943385268135e-05,
4.750670129136895e-05,
4.3900620784693896e-05,
3.96721265639723e-05,
3.9371504137614195e-05,
3.858445232466212e-05,
3.698632654838705e-05,
3.6233315591465426e-05,
3.6128835518807146e-05,
3.388697295681027e-05,
3.2096971869049016e-05,
3.161071718290317e-05,
3.035478879825145e-05,
2.9996259704357953e-05,
2.9768211544669464e-05,
2.5965222352581676e-05,
2.581249756438056e-05,
2.541172166624763e-05,
2.4617238189206685e-05,
2.1824968874822897e-05,
1.4336489132781073e-05,
1.4279793919642383e-05,
1.25988263839688e-05,
1.200207419822508e-05,
9.050046803864312e-06,
7.665067976507404e-06,
7.112810194369284e-06,
7.065366025924115e-06,
6.228676678833624e-06,
4.076137633864285e-06,
3.705854185834439e-06,
3.305506187296381e-06,
3.253046301879979e-06,
3.0276655083169534e-06,
2.701739965919122e-06,
2.6254054630374506e-06,
2.0481736857345507e-06,
1.924332860991469e-06,
1.4677912640139225e-06,
1.1629263253832845e-06,
8.203769827473e-07,
7.516587262554354e-07,
6.10216087729154e-16,
2.4226497544188595e-17,
1.8621172312438543e-18,
5.692061405548899e-20
]
},
"cv_performance": {
"prediction": {
"nmse": 1.0221575815237318,
"r_squared": -0.022157581523731772
},
"selection": {
"precision": 12.95746763024788,
"recall": 1.2386156648451732,
"f1": 2.2599272976908815,
"jaccard": 1.143026581834781
}
}
}