GenoTEX / output /regress /COVID-19 /significant_genes_condition_Huntingtons_Disease.json
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{
"significant_genes": {
"Variable": [
"H2AC15",
"RNASE2",
"BIRC5",
"C1QB",
"SNORD80",
"EPHX2",
"TRPM4",
"LEP",
"PRSS36",
"SNF8",
"IGLL5",
"PRB4",
"UXT",
"ND6",
"ACVR1C",
"PSPHP1",
"CACNB4",
"ARL10",
"SNORA47",
"DYNLT4",
"CAVIN3",
"TRMO",
"TRO",
"SPATC1L",
"PSMD4",
"CLIC4",
"JAM3",
"RAB11FIP5",
"H3C15",
"ESPNL",
"MT1E",
"CHI3L1",
"PANX2",
"JCHAIN",
"SYNGR1",
"NHLRC2",
"FPR3",
"SMIM1",
"ST3GAL1",
"MS4A2",
"TEKT4",
"FAM86B1",
"BACE1",
"CDH2",
"CHTF18",
"MTVR2",
"RPS5",
"KIR2DS3",
"C11orf86",
"PIF1",
"CPNE1",
"ZNF219",
"ZSWIM7",
"TMEM81",
"HS1BP3-IT1",
"FAM193B",
"SOX5",
"ADAMTS1",
"FRG1BP",
"TTC34",
"TYMS",
"GPR84",
"GPC2",
"PODXL",
"SPACA3",
"ZNF329",
"EFCC1",
"PPP1R27",
"SNORD19",
"SH3D21",
"PHLDA3",
"LIMS4",
"NPSA",
"AK8",
"KLK1",
"PRR14L",
"RLN3",
"RBMX2",
"SIRT4",
"ARIH2OS",
"PRRT2",
"CNTNAP3",
"RUSC1-AS1",
"ANKDD1A",
"ENGASE",
"TLN2",
"PTGER3",
"CARS1",
"HDAC11",
"OR4C6",
"ITPKB",
"CABP4"
],
"Coefficient": [
0.06719231733476624,
0.049717440837875486,
0.0489887894616204,
0.03115012838140972,
-0.020792947382804895,
-0.02025852763095213,
-0.02024356565625907,
0.01995587232728419,
-0.019929803574311445,
-0.0197151479991445,
0.01943949016844463,
-0.016160617676811293,
-0.01614058978378638,
0.015761652912199355,
-0.01517482323090774,
0.014714296866620775,
-0.014295639030972203,
0.014132601103866011,
-0.0137170863478542,
-0.01355683411650467,
0.013249269107120536,
-0.012611473924096549,
0.011185013106031188,
-0.011181137282830097,
0.010966051339227378,
0.010396429367586134,
0.009974152158721068,
0.00939415656209863,
0.009380635323604775,
0.008877861578397523,
0.008625280171947804,
-0.007915269122254018,
-0.007848559480784898,
0.007630091643880173,
0.007601131875140069,
0.007540720915250862,
0.007540036824259271,
0.007025502464294646,
0.006722603032039121,
-0.0066498082165059825,
-0.005840661238930128,
0.00569020213742129,
-0.005643049405140719,
-0.005601950838847981,
-0.005239695869900872,
0.005066411643455316,
-0.00503185313215073,
0.004673995872722546,
-0.004292403913901745,
0.0038961495834207963,
-0.0037483099450165555,
-0.0037317351966804696,
-0.003644832710113086,
-0.003396218941161981,
0.0033950306914444506,
-0.002924119193855697,
0.002918560357605019,
-0.0028862854268259792,
0.002882581474830869,
-0.0026189928466236736,
0.0025655579426380267,
0.002546620051791859,
-0.0024535062210430583,
-0.002417247775703192,
0.0022678112141368083,
-0.002049521860595922,
-0.0019520970911961776,
0.001739047096712986,
0.0017155288731523785,
-0.0016915408892457075,
0.0015756520768897921,
-0.0015677079114261182,
-0.0013931289760278386,
0.001329844111682691,
0.001175388921135887,
0.001090072269858079,
-0.000904804417648901,
-0.0008707453786342583,
-0.000721174589631111,
0.0006624774233579137,
-0.0004888611799568239,
-0.000401784176754342,
-0.0003943705242290033,
0.00038755236379531553,
-0.000357704185821631,
-0.0003229476687520626,
-0.00026486255899586065,
0.00012849516465532945,
6.324624012584692e-05,
-5.626516880606657e-05,
-3.168089531202201e-05,
-7.5691391412574435e-06
],
"Absolute Coefficient": [
0.06719231733476624,
0.049717440837875486,
0.0489887894616204,
0.03115012838140972,
0.020792947382804895,
0.02025852763095213,
0.02024356565625907,
0.01995587232728419,
0.019929803574311445,
0.0197151479991445,
0.01943949016844463,
0.016160617676811293,
0.01614058978378638,
0.015761652912199355,
0.01517482323090774,
0.014714296866620775,
0.014295639030972203,
0.014132601103866011,
0.0137170863478542,
0.01355683411650467,
0.013249269107120536,
0.012611473924096549,
0.011185013106031188,
0.011181137282830097,
0.010966051339227378,
0.010396429367586134,
0.009974152158721068,
0.00939415656209863,
0.009380635323604775,
0.008877861578397523,
0.008625280171947804,
0.007915269122254018,
0.007848559480784898,
0.007630091643880173,
0.007601131875140069,
0.007540720915250862,
0.007540036824259271,
0.007025502464294646,
0.006722603032039121,
0.0066498082165059825,
0.005840661238930128,
0.00569020213742129,
0.005643049405140719,
0.005601950838847981,
0.005239695869900872,
0.005066411643455316,
0.00503185313215073,
0.004673995872722546,
0.004292403913901745,
0.0038961495834207963,
0.0037483099450165555,
0.0037317351966804696,
0.003644832710113086,
0.003396218941161981,
0.0033950306914444506,
0.002924119193855697,
0.002918560357605019,
0.0028862854268259792,
0.002882581474830869,
0.0026189928466236736,
0.0025655579426380267,
0.002546620051791859,
0.0024535062210430583,
0.002417247775703192,
0.0022678112141368083,
0.002049521860595922,
0.0019520970911961776,
0.001739047096712986,
0.0017155288731523785,
0.0016915408892457075,
0.0015756520768897921,
0.0015677079114261182,
0.0013931289760278386,
0.001329844111682691,
0.001175388921135887,
0.001090072269858079,
0.000904804417648901,
0.0008707453786342583,
0.000721174589631111,
0.0006624774233579137,
0.0004888611799568239,
0.000401784176754342,
0.0003943705242290033,
0.00038755236379531553,
0.000357704185821631,
0.0003229476687520626,
0.00026486255899586065,
0.00012849516465532945,
6.324624012584692e-05,
5.626516880606657e-05,
3.168089531202201e-05,
7.5691391412574435e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 100.0,
"precision": 100.0,
"recall": 100.0,
"f1": 100.0
},
"selection": {
"precision": 3.2110034463461767,
"recall": 0.6615776081424937,
"f1": 1.0963238204432193,
"jaccard": 0.5512923116243081
}
}
}