GenoTEX / output /regress /Fibromyalgia /significant_genes_condition_Hypertension.json
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{
"significant_genes": {
"Variable": [
"LTA4H",
"ANKRD20A11P",
"CCDC170",
"LCT",
"MIR9-1",
"PARD3B",
"ENC1",
"HLA-L",
"STXBP1",
"NEIL1",
"FAM24A",
"NDC1",
"MFSD3",
"ELAPOR1",
"IL13",
"ITSN1",
"NUDC",
"HTN1",
"PGM5P2",
"MARCHF8",
"AKAP12",
"MDS2",
"CADPS",
"TTLL7",
"IFNE",
"MYH1",
"FAM167A-AS1",
"VWA5B2",
"HLA-DQB1",
"TMEM255B",
"OR10A7",
"NAPSB",
"OR1N1",
"CPT1A",
"IFT122",
"APBB2",
"HLA-DPB2",
"RGS17",
"CFAP53",
"TXNDC11",
"DCPS",
"TNKS1BP1",
"KAT2B",
"MMP12",
"ELL3",
"DRICH1",
"CYP27A1",
"JAKMIP3",
"SPHK1",
"MROH8",
"BLVRA",
"RDH5",
"GSDME",
"ITGB8",
"UQCC3",
"RRH",
"TGFB2",
"ATOH8",
"SCG3",
"C1orf174",
"CYP26B1",
"LRRC23",
"POC1A",
"SLC25A34",
"TBX6",
"EWSAT1",
"THOC3",
"HMGN2P46",
"CPA3",
"PTP4A3",
"LRIG3",
"MST1",
"NOVA1",
"PIDD1",
"LRRC43",
"CCDC146",
"TRPM4",
"HTR3B",
"ICA1L",
"RNF17",
"PTGDS",
"CCR9",
"C9orf40",
"EBI3",
"CCNI",
"EHHADH",
"DEFB119",
"TPO",
"DVL2",
"TXNDC8",
"DOCK3",
"MRPL38",
"NBPF22P",
"CROCC",
"TIGD1",
"IL3RA",
"LINC02912",
"DERL3",
"HTN3",
"AFAP1L2",
"ZNF620",
"OSGIN1",
"PALLD",
"F7",
"LINC00272",
"MTNR1B",
"TTC41P",
"JOSD2",
"KTN1-AS1",
"C14orf93",
"MYLIP",
"MEDAG",
"LYG1",
"LGI4",
"SMAD9",
"ECRG4",
"PDGFRB",
"KIAA1656",
"TCEAL1",
"CLLU1",
"MCAM",
"C2orf81",
"IL31RA",
"RAB11FIP3",
"NEFL",
"FKBPL"
],
"Coefficient": [
0.07415813249314127,
-0.0666287278968831,
0.05556318040013891,
0.053584125044995407,
0.05298575964318044,
0.04838341486552514,
-0.046297536445408405,
0.04626268677710758,
0.04579431772827056,
0.045056238583764854,
0.0447240178490752,
0.04258225055407399,
-0.040682773146074123,
0.0381715125806037,
0.03595601187757196,
-0.035295689238532525,
0.033052313541699394,
0.03288414480194828,
-0.03170600047451194,
0.03164018562649513,
-0.030952214192614194,
0.029262705887557566,
-0.02921917243092239,
-0.02819526207178194,
0.02798489200430261,
-0.027522673001456832,
0.026834696929245786,
-0.026140009609684167,
0.025943597390667403,
-0.025924600593842183,
0.02545269718508995,
-0.02489875473892479,
0.02481855718956659,
0.024690444516637784,
0.024639750074230884,
0.02349006820178704,
0.023045252289390028,
0.02207296640938969,
-0.021530738140556054,
-0.021399558020707036,
-0.0207340805659541,
-0.020083910061328408,
0.020048120015202935,
0.01989742105860364,
0.018970911115707163,
0.018394909169934442,
0.018393099554532263,
0.018269881749028737,
0.017531938583767698,
-0.01738972543837958,
-0.016786742924067583,
0.016428859176837035,
0.01608398279804823,
-0.015851197251114772,
-0.015608743313621394,
-0.015365693820795731,
-0.015202634458360684,
0.014919771366792123,
-0.013572190687120752,
0.013214579870092096,
-0.012597701097010246,
-0.0124590690802825,
0.012079649361003798,
0.01190659533117318,
0.01181867056850755,
-0.011389815886946663,
0.011225281707157427,
0.010986971214941495,
-0.010663014326168353,
-0.010540386569705818,
0.010383878406673359,
0.010346325972172424,
0.010217991562180144,
0.010184621333288124,
0.010163533301379896,
-0.00999885567978427,
0.009929757583868744,
-0.00944694604267007,
-0.009230925646457642,
-0.009183806363480288,
-0.00917662691730078,
-0.009155101977323363,
0.008918956514896485,
-0.008693003540188446,
0.008574382058934146,
0.008205719300765834,
0.008186400727870129,
0.008064291107477733,
-0.007892771991440853,
-0.007515992189233281,
0.006667991679203891,
0.006594902603543964,
-0.006494608188646795,
0.006422822310286686,
-0.0063499655423487926,
-0.0062145375596534425,
0.005766767068645857,
-0.00567054457324941,
-0.00564335201721157,
-0.005450988148873858,
-0.005287151856400469,
-0.004801094049804128,
-0.004793701226401853,
0.0047241387947736715,
0.004489040780404108,
-0.004479743685303424,
-0.004359375528310894,
0.0039836887750716735,
-0.0034854137270193992,
-0.003261627600860815,
-0.0031297157670904367,
-0.002816944006686316,
0.0026409182010481485,
-0.0025031195470720476,
-0.0024310214972705214,
-0.002252613549757722,
-0.0021204271450614644,
0.0019813692331381127,
-0.0018613634896471297,
-0.0017296867898338201,
-0.001689561372607764,
-0.0015932955923436218,
-0.0014565111079433996,
0.0008628328715279792,
0.0007144393679096479,
0.0005547257872062128
],
"Absolute Coefficient": [
0.07415813249314127,
0.0666287278968831,
0.05556318040013891,
0.053584125044995407,
0.05298575964318044,
0.04838341486552514,
0.046297536445408405,
0.04626268677710758,
0.04579431772827056,
0.045056238583764854,
0.0447240178490752,
0.04258225055407399,
0.040682773146074123,
0.0381715125806037,
0.03595601187757196,
0.035295689238532525,
0.033052313541699394,
0.03288414480194828,
0.03170600047451194,
0.03164018562649513,
0.030952214192614194,
0.029262705887557566,
0.02921917243092239,
0.02819526207178194,
0.02798489200430261,
0.027522673001456832,
0.026834696929245786,
0.026140009609684167,
0.025943597390667403,
0.025924600593842183,
0.02545269718508995,
0.02489875473892479,
0.02481855718956659,
0.024690444516637784,
0.024639750074230884,
0.02349006820178704,
0.023045252289390028,
0.02207296640938969,
0.021530738140556054,
0.021399558020707036,
0.0207340805659541,
0.020083910061328408,
0.020048120015202935,
0.01989742105860364,
0.018970911115707163,
0.018394909169934442,
0.018393099554532263,
0.018269881749028737,
0.017531938583767698,
0.01738972543837958,
0.016786742924067583,
0.016428859176837035,
0.01608398279804823,
0.015851197251114772,
0.015608743313621394,
0.015365693820795731,
0.015202634458360684,
0.014919771366792123,
0.013572190687120752,
0.013214579870092096,
0.012597701097010246,
0.0124590690802825,
0.012079649361003798,
0.01190659533117318,
0.01181867056850755,
0.011389815886946663,
0.011225281707157427,
0.010986971214941495,
0.010663014326168353,
0.010540386569705818,
0.010383878406673359,
0.010346325972172424,
0.010217991562180144,
0.010184621333288124,
0.010163533301379896,
0.00999885567978427,
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0.00944694604267007,
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0.008693003540188446,
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0.008064291107477733,
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0.007515992189233281,
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0.006594902603543964,
0.006494608188646795,
0.006422822310286686,
0.0063499655423487926,
0.0062145375596534425,
0.005766767068645857,
0.00567054457324941,
0.00564335201721157,
0.005450988148873858,
0.005287151856400469,
0.004801094049804128,
0.004793701226401853,
0.0047241387947736715,
0.004489040780404108,
0.004479743685303424,
0.004359375528310894,
0.0039836887750716735,
0.0034854137270193992,
0.003261627600860815,
0.0031297157670904367,
0.002816944006686316,
0.0026409182010481485,
0.0025031195470720476,
0.0024310214972705214,
0.002252613549757722,
0.0021204271450614644,
0.0019813692331381127,
0.0018613634896471297,
0.0017296867898338201,
0.001689561372607764,
0.0015932955923436218,
0.0014565111079433996,
0.0008628328715279792,
0.0007144393679096479,
0.0005547257872062128
]
},
"cv_performance": {
"prediction": {
"accuracy": 65.71428571428572,
"precision": 63.45454545454545,
"recall": 61.77489177489177,
"f1": 62.4330198537095
},
"selection": {
"precision": 0.19607843137254902,
"recall": 0.5128205128205128,
"f1": 0.28368794326241137,
"jaccard": 0.14285714285714285
}
}
}