GenoTEX / output /regress /Eczema /significant_genes_condition_Asthma.json
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{
"significant_genes": {
"Variable": [
"ABCA13",
"ATP6V0A2",
"ARMH4",
"DSEL",
"ADAM23",
"AFAP1-AS1",
"C8orf88",
"AHNAK2",
"AMER2",
"ADGRG3",
"CES5A",
"ARSB",
"EXD1",
"AGFG2",
"AGBL4",
"CC2D2B",
"C6orf141",
"AHI1",
"C14orf180",
"ABCC4",
"ACAP2",
"AIFM3",
"MTUS2-AS1",
"COL1A1",
"ABHD11",
"ADAM9",
"SIAE",
"BTBD19",
"ACTB",
"ADAP1",
"ENTPD5",
"ATOH7",
"AGAP11",
"ASAP1-IT2",
"ADAM32",
"AK8",
"ZNF577",
"AGK",
"ASMTL-AS1",
"BCL6B",
"KCNA6",
"DEUP1",
"AKT1S1",
"ANKRD65",
"ADIG",
"LARS2",
"KRT73",
"BFSP2-AS1",
"PAX8",
"DIRC1",
"GPR82",
"FIP1L1",
"ADGRG7",
"EXD3",
"BNC1",
"DNAJC3",
"BEST3",
"PANX2",
"B4GALNT2",
"ARMCX5",
"ACP1",
"POLK",
"IL27",
"CNST",
"MYO1H",
"IFNL2",
"DYNLRB1",
"HDAC9",
"CYCS",
"C16orf46",
"ADH1B",
"MGC16275",
"GCLC",
"BMP2K",
"CARF",
"C10orf90",
"DDAH1",
"COCH",
"ANKIB1",
"DND1",
"CFLAR-AS1",
"NBPF4",
"TMEM53",
"CELSR3",
"ASH1L-AS1",
"CHCT1",
"CLIC6",
"CCDC27",
"CEP170",
"B3GALT6",
"FAM76B",
"AGPAT1",
"CD200R1",
"ACTR2",
"AAGAB",
"ENTPD3-AS1",
"ATF6B",
"ADAMTS15",
"BTBD16",
"DGKE",
"FAM227B",
"TSPEAR",
"SERPINA9",
"DBF4B",
"CDK12",
"SCRG1",
"CEP89",
"ZNF280D",
"LANCL3",
"ZSCAN20",
"CARD14",
"C10orf126",
"SEMA3A",
"TTN",
"DPY19L2P4",
"FAM218A",
"KCNE4",
"C12orf76",
"KLHDC7A",
"SBF2",
"CNNM2",
"AUTS2",
"FRA10AC1",
"APOBEC3F",
"FAM230B",
"ABCC9",
"NT5DC2",
"ELOA3BP",
"RAET1E",
"GHRLOS",
"AMBRA1",
"AGBL3",
"CDH19",
"AK7",
"OR7D2",
"ERVFH21-1",
"PWRN1",
"CCDC150",
"METTL21A",
"CTNNA3",
"CNTNAP4",
"UBE2I",
"ERVW-1",
"CCDC174",
"ARMH3",
"CEP104",
"CXADR",
"DPYD",
"PACSIN2",
"SLC7A14",
"CDH24",
"CASC2",
"IL16",
"PKHD1",
"ARK2C",
"SFTA2",
"RCC1L",
"AGAP2-AS1",
"CLCNKB",
"FOXL1",
"PDPK1",
"CCDC140",
"CYP4F22",
"ELOA3CP",
"CEP170P1",
"ELOA3DP"
],
"Coefficient": [
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-0.08378070768421808,
0.0528590065632009,
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0.05067811056105844,
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-0.04720592757797382,
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0.04552040071069039,
-0.042529324333838936,
-0.04247220957769736,
-0.03730112639652219,
0.034059161818345084,
0.033775635537118966,
-0.03146382025753423,
0.03074890401536055,
-0.0301416375624747,
0.028871802277212852,
-0.028807481119314252,
0.028381465929333747,
0.028031132452474582,
0.027334089082490843,
0.02702070166943315,
0.026954325696930605,
-0.0260062628758996,
0.025981376466288373,
0.025179878965699284,
0.02495268562221904,
0.02420669881335606,
-0.023755348047812295,
-0.023494520594269385,
-0.02322591410269436,
0.021480650385440638,
-0.02147852803862368,
-0.021459539991826728,
-0.021312118350555895,
0.020748492554568676,
-0.020590760501502856,
0.0191889359420116,
0.01898925811954984,
0.018721799804167185,
-0.018509596486669774,
0.01747534175528479,
-0.017070377584511513,
-0.016879049399131787,
-0.016651572835332668,
0.015302836949990734,
-0.014355387119461025,
-0.013790988506187755,
0.013683155749092324,
-0.013485266312088866,
0.013345789876374506,
-0.013103928391284863,
-0.0128208716648591,
-0.01262392726097379,
-0.012222844872079301,
0.012198403248926477,
-0.011910257324041905,
-0.011536663935928849,
-0.011352911974791392,
-0.011295401115558655,
-0.011192222942465432,
-0.01113155809377317,
0.011121877578846607,
0.01112065777817184,
0.010980024494186193,
0.01081158074981473,
-0.010784042014190904,
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0.0065999705574549036,
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0.006094416001292264,
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0.00573695844738859,
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0.003430362664727702,
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0.0030158491558844908,
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0.0027024863526802327,
0.002630927375249788,
0.0025685957182785273,
-0.002470863611900712,
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-0.00226554146074728,
-0.0022615457212861833,
0.0022232957127861445,
0.0022109891194201942,
-0.0021234457233688603,
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0.0018695218557549542,
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-0.0016677766350934647,
0.001435039012896129,
0.0013580302390404188,
-0.0012606388019870461,
0.001196453569706929,
0.0011285551846937762,
0.0009812720106370002,
-0.0009081549627937983,
-0.0008489493745491184,
0.0008437700930150401,
0.0007482295879650048,
0.0006937288032123272,
-0.0006775302801801008,
-0.0006543145626067053,
-0.0006364865299944727,
-0.0006337241834677568,
0.0006280306505325705,
0.0006035057562436115,
-0.0005672693657824381,
0.0004777571252134633,
0.0004756496496832825,
-0.0004446374565876775,
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0.00039876677564851324,
-0.00037216642300330296,
0.00031925895456145364,
-0.00030237483331111103,
-0.0002552219781029595,
-0.00015195024455942168,
-0.00010543665238235266,
8.60759828770093e-05,
3.4995171173720434e-05,
-2.8991552202356236e-05,
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-9.456519262028699e-06,
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4.236077466268777e-06,
2.7112531568499585e-17,
-8.075436870926512e-19,
2.691812290308839e-19
],
"Absolute Coefficient": [
0.11453740748259277,
0.08378070768421808,
0.0528590065632009,
0.05129101776221969,
0.05067811056105844,
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0.04552040071069039,
0.042529324333838936,
0.04247220957769736,
0.03730112639652219,
0.034059161818345084,
0.033775635537118966,
0.03146382025753423,
0.03074890401536055,
0.0301416375624747,
0.028871802277212852,
0.028807481119314252,
0.028381465929333747,
0.028031132452474582,
0.027334089082490843,
0.02702070166943315,
0.026954325696930605,
0.0260062628758996,
0.025981376466288373,
0.025179878965699284,
0.02495268562221904,
0.02420669881335606,
0.023755348047812295,
0.023494520594269385,
0.02322591410269436,
0.021480650385440638,
0.02147852803862368,
0.021459539991826728,
0.021312118350555895,
0.020748492554568676,
0.020590760501502856,
0.0191889359420116,
0.01898925811954984,
0.018721799804167185,
0.018509596486669774,
0.01747534175528479,
0.017070377584511513,
0.016879049399131787,
0.016651572835332668,
0.015302836949990734,
0.014355387119461025,
0.013790988506187755,
0.013683155749092324,
0.013485266312088866,
0.013345789876374506,
0.013103928391284863,
0.0128208716648591,
0.01262392726097379,
0.012222844872079301,
0.012198403248926477,
0.011910257324041905,
0.011536663935928849,
0.011352911974791392,
0.011295401115558655,
0.011192222942465432,
0.01113155809377317,
0.011121877578846607,
0.01112065777817184,
0.010980024494186193,
0.01081158074981473,
0.010784042014190904,
0.010279727281770516,
0.009965019642845348,
0.009702869173083545,
0.009578611007719229,
0.008717488906329372,
0.008680665689989037,
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8.60759828770093e-05,
3.4995171173720434e-05,
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9.456519262028699e-06,
6.917289437494409e-06,
4.236077466268777e-06,
2.7112531568499585e-17,
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2.691812290308839e-19
]
},
"cv_performance": {
"prediction": {
"accuracy": 67.27272727272728,
"precision": 73.65079365079364,
"recall": 77.5873015873016,
"f1": 73.63886113886115
},
"selection": {
"precision": 1.2980879777980117,
"recall": 9.523809523809524,
"f1": 2.2833070224936742,
"jaccard": 1.157499604868026
}
}
}