GenoTEX / output /regress /Eczema /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"ABCA13",
"ATP6V0A2",
"ADAM23",
"DSEL",
"AFAP1-AS1",
"SIAE",
"ACAP2",
"ASMTL-AS1",
"AGBL4",
"ADAP1",
"ENTPD4",
"ARMH4",
"MTUS2-AS1",
"CDK12",
"C8orf88",
"AGFG2",
"EXD1",
"C14orf180",
"ARSB",
"ADGRG3",
"COL1A1",
"ADAM9",
"KCNA6",
"CES5A",
"BTBD19",
"AAGAB",
"PAX8",
"AGAP11",
"ACTB",
"ABCC4",
"AHI1",
"ACP1",
"COCH",
"EXD3",
"ACTR2",
"AHNAK2",
"DYNLRB1",
"AMER2",
"ATOH7",
"CC2D2B",
"AGK",
"BCL6B",
"C6orf141",
"BEST3",
"CD200R1",
"POLK",
"GCLC",
"ZNF577",
"ENTPD3-AS1",
"AKT1S1",
"DGKE",
"FRA10AC1",
"DENND5B",
"DNAI3",
"CFAP221",
"ABHD11",
"ADAM32",
"EPB41L4A",
"C16orf46",
"DIRC1",
"CFAP47",
"ZNF114",
"DNAJC3",
"KRT73",
"DEUP1",
"UBE2I",
"AK7",
"ADAMTS18",
"ANKRD65",
"DND1",
"MPHOSPH6",
"CLASP2",
"DDAH1",
"CLIC6",
"NUDT9P1",
"CDO1",
"FIP1L1",
"TMEM53",
"TSPEAR",
"BIN3",
"C10orf126",
"CCDC140",
"AK8",
"GPR82",
"CNTNAP4",
"AIFM3",
"BTBD16",
"SLC7A14",
"ABHD6",
"CYCS",
"PANX2",
"ASH1L-AS1",
"CYTH4",
"HDAC9",
"ASAP1-IT2",
"CACNA1C",
"AQP4-AS1",
"BFSP2-AS1",
"HDAC4",
"CDH19",
"CARF",
"CCDC150",
"ADAMTS15",
"CYP4A11",
"ASB14",
"ACTR3B",
"ACACB",
"LARS2",
"DNPH1",
"B4GALNT2",
"NBPF4",
"MGC16275",
"ZNF280D",
"CDH24",
"SEMA3A",
"ARHGAP29",
"ZSCAN20",
"DNAJA3",
"C9orf43",
"FAM20A",
"ERVFH21-1",
"FAM76B",
"CBFA2T2",
"CNST",
"BMP2K",
"ENTPD5",
"ATF6B",
"GPR173",
"SBF2",
"CLECL1P",
"IRAK1",
"DYNLT2",
"CEP89",
"LMOD3",
"EPS15L1",
"KCNE4",
"HEATR9",
"FAM227B",
"CNOT6L",
"POM121L1P",
"AGPAT1",
"BNC1",
"AGAP2-AS1",
"DBF4B",
"KCNJ9",
"EML4",
"OR7D2",
"DIS3L2",
"CNP",
"CILK1",
"NT5DC2",
"PACSIN2",
"CCDC13",
"ATP6V1H",
"CCDC116",
"HTRA4",
"CCDC27",
"DNAAF5",
"CYGB",
"PKHD1",
"CCDC174",
"RSPO2",
"MYO1H"
],
"Coefficient": [
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-0.04113609271268678,
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-0.039743256591493456,
0.038417640370202524,
0.03501622711596893,
-0.03465662747965956,
-0.03352464690252678,
0.033363298745059715,
0.032057198065002755,
-0.03189436245418144,
-0.03188135766444883,
-0.031836756859744325,
0.031634191093810576,
0.03078402093636152,
0.02974155658980066,
-0.028098012592078152,
0.027654658404345472,
0.026784301691380158,
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0.026343116717665527,
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0.024328435029931584,
0.023899676045426234,
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-0.02161727162628893,
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-0.019497430133536133,
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-0.0189266796428906,
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0.01750315047549378,
-0.017111405090995513,
0.0169034597532301,
0.014524584630019455,
-0.014498400999478186,
0.014401289769246534,
0.013652183080285438,
-0.01315442006994764,
0.012454550791228475,
0.01153524919663319,
0.010508208179109857,
-0.010505109406120247,
-0.010413758880898603,
0.010400194091215382,
-0.010293936113778565,
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0.0039884510226201675,
0.003934958615057635,
0.0037588861061542914,
-0.003450544987609144,
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-0.0026723102475899236,
0.0026616441970600873,
-0.0026570600250270626,
-0.0024365569913482716,
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0.00207756561693247,
0.0020418024694190307,
-0.0016695564952327535,
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0.0015832744553680395,
0.0013672677101273243,
0.0013473932076912853,
0.0013420493627714395,
0.0012869886140792195,
0.0011554827059306716,
0.001074253492558763,
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0.0007869481629931367,
0.0006322183963331455,
0.0006094848347319101,
0.000607868853832667,
-0.0005313035010053437,
-0.0005184658837666295,
-0.0005080575748270498,
0.0004268526355225049,
-0.00040741123376931005,
-0.00039550328561931125,
-0.00035649246297230456,
0.00034920814521867324,
-0.0003293548422215511,
-0.0003049542726245402,
-0.0002910983842471858,
0.00028591473357454964,
0.0002634770954503526,
0.000255806086725322,
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-0.0002254562106762643,
-0.00018507450253223213,
0.00016562145385528877,
0.00016339513290930993,
-0.00015020543129072814,
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0.000136277723511217,
0.00011178264072229986,
-6.871266059397019e-05,
-5.5367001553281416e-05,
2.3573000837465523e-05,
-2.145458116459521e-05,
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-1.389525797862375e-05,
7.57925264370572e-06,
6.3870508979917e-07,
6.090302437071129e-07
],
"Absolute Coefficient": [
0.13058687992948448,
0.07160446799675477,
0.06846415743803638,
0.0644218081656117,
0.05223068513429304,
0.042416072058337834,
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0.03352464690252678,
0.033363298745059715,
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0.03189436245418144,
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0.031836756859744325,
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0.02974155658980066,
0.028098012592078152,
0.027654658404345472,
0.026784301691380158,
0.026604708533356548,
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0.025241734226215933,
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0.023899676045426234,
0.023698644179747628,
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0.022260493384149028,
0.02225748368475566,
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0.021603337059742503,
0.020525742084542595,
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0.01958654068650551,
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0.019174592214434672,
0.0189266796428906,
0.018764967090139046,
0.01750315047549378,
0.017111405090995513,
0.0169034597532301,
0.014524584630019455,
0.014498400999478186,
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0.013652183080285438,
0.01315442006994764,
0.012454550791228475,
0.01153524919663319,
0.010508208179109857,
0.010505109406120247,
0.010413758880898603,
0.010400194091215382,
0.010293936113778565,
0.010091951392830352,
0.009898084000999502,
0.009517147936970172,
0.009255499838734619,
0.008973042544507025,
0.008819608966604992,
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0.008739577120649097,
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0.00861976133573438,
0.008531973927285844,
0.008082962378485947,
0.007888205209221346,
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0.007778299991895685,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 61.81818181818183,
"precision": 61.81818181818183,
"recall": 100.0,
"f1": 75.72875816993464
},
"selection": {
"precision": 1.4583789882096165,
"recall": 10.476190476190478,
"f1": 2.556371560051506,
"jaccard": 1.2968979317130542
}
}
}