GenoTEX / output /regress /Fibromyalgia /significant_genes_condition_Amyotrophic_Lateral_Sclerosis.json
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{
"significant_genes": {
"Variable": [
"ANKRD20A11P",
"CCDC170",
"MFSD3",
"HLA-L",
"LTA4H",
"PARD3B",
"NEIL1",
"LCT",
"FAM24A",
"NDC1",
"ENC1",
"KAT2B",
"ITSN1",
"OR1N1",
"MIR9-1",
"TMEM255B",
"MYH1",
"ELAPOR1",
"NUDC",
"STXBP1",
"PGM5P2",
"TTLL7",
"IFNE",
"DCPS",
"COL4A6",
"APBB2",
"ATP2B3",
"HTN1",
"FAM167A-AS1",
"BLVRA",
"HLA-DQB1",
"CCNI",
"AKAP12",
"CYP27A1",
"SCG3",
"HMGN2P46",
"PIDD1",
"CADPS",
"LRIG3",
"ATOH8",
"CPT1A",
"CCR9",
"IL13",
"MMP12",
"UQCC3",
"RGS17",
"ECRG4",
"NAPSB",
"PGC",
"OR10A7",
"TXNDC11",
"VWA5B2",
"MROH8",
"HLA-DPB2",
"GSDME",
"ELL3",
"F7",
"MEDAG",
"POC1A",
"DEFB119",
"DOCK3",
"TBX6",
"IFT122",
"DVL2",
"TTC41P",
"TXNDC8",
"CROCC",
"IL10",
"RAB11FIP3",
"SPHK1",
"LGI4",
"MDS2",
"DERL3",
"CYP26B1",
"KTN1-AS1",
"TNKS1BP1",
"LRRC43",
"C1orf174",
"SLC25A34",
"CD93",
"LINC00272",
"JOSD2",
"HTR3B",
"LRRC23",
"EHHADH",
"NT5M",
"MRPL38",
"MTNR1B",
"OR4A16",
"CD300LD-AS1",
"AFAP1L2",
"ITGB8",
"CRCT1",
"NBPF22P",
"PTP4A3",
"DRICH1",
"SNORD113-4",
"ZNF530",
"HPCAL4",
"KIAA1656",
"JAKMIP3",
"CPA3",
"ADGRL1",
"NYAP2",
"PTGDS",
"C14orf93",
"SCARNA8",
"IL31RA",
"ZNF620",
"OSGIN1",
"CFAP53",
"MYBPC1",
"CCNA1",
"PEX10",
"PI3",
"TMEM252",
"CCDC146",
"FKBPL",
"C2orf81",
"CAMKV",
"EWSAT1",
"CEND1",
"ADCK1",
"PALLD",
"SEMA3A",
"SLC25A21",
"SLC25A47",
"BTC",
"HTN3",
"NOVA1",
"STAR",
"ALPK3",
"PDGFRB",
"C9orf40",
"AP1M2",
"MFSD4A",
"IL3RA",
"PLD6",
"ANKRD53",
"TRPM4",
"MCAM",
"APIP",
"SH2D7",
"PIK3R2",
"EBI3",
"LINC02912",
"NEFL",
"NPAS3",
"PRR35",
"MARCHF8",
"ICA1L",
"FOXRED1",
"SALL2",
"TGFB2",
"PGAP2",
"CHEK2",
"RDH5",
"CLLU1",
"RRH",
"METTL27",
"THSD7B",
"HPGDS",
"SMAD9",
"CHST7",
"PLA2G4C",
"ZNF99",
"COA1",
"SLC5A5",
"RNF17",
"MIR205",
"MORN1",
"ZNF625",
"ZNF20",
"MIR205HG"
],
"Coefficient": [
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],
"Absolute Coefficient": [
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]
},
"cv_performance": {
"prediction": {
"accuracy": 69.28571428571428,
"precision": 67.05494505494505,
"recall": 66.53679653679653,
"f1": 66.56842518911485
},
"selection": {
"precision": 0.2941335496080022,
"recall": 1.0256410256410255,
"f1": 0.4571577847439916,
"jaccard": 0.22989265070189924
}
}
}