GenoTEX / output /regress /Fibromyalgia /significant_genes_condition_Arrhythmia.json
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{
"significant_genes": {
"Variable": [
"ANKRD20A11P",
"CCDC170",
"LTA4H",
"PARD3B",
"FAM24A",
"NDC1",
"NEIL1",
"MIR9-1",
"HLA-L",
"ENC1",
"LCT",
"STXBP1",
"IFT122",
"MFSD3",
"ELAPOR1",
"ITSN1",
"PGM5P2",
"TTLL7",
"MARCHF8",
"HTN1",
"CADPS",
"OR1N1",
"FAM167A-AS1",
"NUDC",
"TMEM255B",
"AKAP12",
"HLA-DQB1",
"IL13",
"KAT2B",
"TXNDC11",
"IFNE",
"BLVRA",
"MYH1",
"RGS17",
"MDS2",
"UQCC3",
"CPT1A",
"OR10A7",
"GSDME",
"DCPS",
"CYP27A1",
"ATOH8",
"NAPSB",
"MMP12",
"RDH5",
"APBB2",
"IL3RA",
"SLC25A34",
"PTP4A3",
"TNKS1BP1",
"RRH",
"SPHK1",
"CYP26B1",
"CFAP53",
"COL4A6",
"LRRC43",
"HLA-DPB2",
"VWA5B2",
"DRICH1",
"LINC02912",
"POC1A",
"ELL3",
"ITGB8",
"HTN3",
"CCNI",
"JAKMIP3",
"DERL3",
"DOCK3",
"DEFB119",
"TRPM4",
"MST1",
"SCG3",
"AFAP1L2",
"MROH8",
"LRIG3",
"MRPL38",
"HTR3B",
"MTNR1B",
"ICA1L",
"THOC3",
"DVL2",
"OSGIN1",
"PIDD1",
"TTC41P",
"TBX6",
"CCDC146",
"SMAD9",
"HMGN2P46",
"LINC00272",
"NOVA1",
"RNF17",
"C9orf40",
"MCAM",
"EBI3",
"CPA3",
"TPO",
"EWSAT1",
"CCR9",
"C14orf93",
"COA1",
"ECRG4",
"TXNDC8",
"CDS1",
"LRRC23",
"MFSD4A",
"TCEAL1",
"KIAA1656",
"EHHADH",
"CROCC",
"KTN1-AS1",
"RAB11FIP3",
"NPAS3",
"MEDAG",
"JOSD2",
"ATP2B3",
"F7",
"LGI4",
"MIR205",
"APIP",
"LYG1",
"TGFB2",
"C1orf174",
"PTGDS",
"ZNF530",
"FOXRED1",
"NEFL",
"FKBPL",
"HPCAL4",
"SLC25A47",
"MIR205HG"
],
"Coefficient": [
-0.06757300794923786,
0.06542129339868241,
0.06370684362242969,
0.05068227987572994,
0.050528847875785834,
0.050036443930720806,
0.048730668651010146,
0.04819974776816241,
0.04753421307192413,
-0.04697832526288762,
0.04509869842492271,
0.04406179670947466,
0.03983186403984459,
-0.03940748722895219,
0.03760725214124796,
-0.03646130644829284,
-0.03457575568516855,
-0.03336974157528836,
0.033272286996340016,
0.03321455163328923,
-0.03232866222795681,
0.031961755051070746,
0.03081099144514324,
0.030665336857191004,
-0.02979507891489875,
-0.029423713166593524,
0.027472685516502747,
0.02711719207318624,
0.026939942581148752,
-0.025034594517445448,
0.02493849723927115,
-0.024345011409597026,
-0.023440998089031443,
0.022059861286590238,
0.021368238945269853,
-0.021329540325925784,
0.02124985203188155,
0.020780972390785923,
0.02066880568875131,
-0.020561794493645202,
0.020246858101090556,
0.018972985083397655,
-0.018933257214840543,
0.018715792391282033,
0.017190187823654873,
0.01707047521806811,
-0.016559617056037326,
0.01652114601142841,
-0.016459878385661496,
-0.016366047576710032,
-0.016060549643620012,
0.01600124681725032,
-0.015603391008248126,
-0.015325451096990668,
0.014931909462061965,
0.014584649400277436,
0.014319138143222922,
-0.014252466472334701,
0.014101473604987685,
0.012913302373948214,
0.012849493075983758,
0.012699687096357205,
-0.012456411619077377,
-0.012277470428131388,
0.011732016343616999,
0.011413994880544509,
-0.011172894523428381,
0.011115235857209978,
0.010951400884296608,
0.010393495328219387,
0.01028951700065838,
-0.010198806984694395,
-0.010094133321323957,
-0.009911602052631936,
0.009628120702108356,
0.009447232257952265,
-0.009310589725521318,
-0.009274189912718457,
-0.008794485754912578,
0.008790638431150407,
-0.008426698167767475,
-0.00821006181816066,
0.008006524192099738,
-0.00784383816891111,
0.007759020494440776,
-0.007757673431830739,
-0.007421576826128059,
0.007403257920307051,
0.0072969609904795125,
0.006964814748920294,
-0.006847562388266742,
0.006728737349439941,
-0.006705572768060158,
-0.006509218107616911,
-0.006427665696514277,
0.005961705222263251,
-0.005504707672035389,
-0.0054090062223764645,
-0.00534495848248958,
0.005331107417639844,
-0.00514043697147742,
-0.004912800108267455,
0.0046256529739528455,
-0.004609881725822224,
0.004470341736428625,
-0.004210206292686908,
0.004145293310968211,
0.004020563632888582,
0.003727228348319863,
-0.0034802770703983425,
0.003229847018092347,
-0.0031368516280045355,
-0.0030068193042229493,
0.00292046823195049,
0.0028668436173348555,
0.0027946265847715868,
-0.002299326248111585,
0.0021735468745956296,
0.001875163251544629,
0.0018639820081435667,
-0.001620945833976446,
0.0013112799751531,
-0.0011965480745608653,
0.0011370539288381384,
0.0006444729298554806,
0.0005843138937467843,
0.00034839131285463546,
9.126720967871466e-05,
4.749011031669298e-05,
1.7200638409685523e-17
],
"Absolute Coefficient": [
0.06757300794923786,
0.06542129339868241,
0.06370684362242969,
0.05068227987572994,
0.050528847875785834,
0.050036443930720806,
0.048730668651010146,
0.04819974776816241,
0.04753421307192413,
0.04697832526288762,
0.04509869842492271,
0.04406179670947466,
0.03983186403984459,
0.03940748722895219,
0.03760725214124796,
0.03646130644829284,
0.03457575568516855,
0.03336974157528836,
0.033272286996340016,
0.03321455163328923,
0.03232866222795681,
0.031961755051070746,
0.03081099144514324,
0.030665336857191004,
0.02979507891489875,
0.029423713166593524,
0.027472685516502747,
0.02711719207318624,
0.026939942581148752,
0.025034594517445448,
0.02493849723927115,
0.024345011409597026,
0.023440998089031443,
0.022059861286590238,
0.021368238945269853,
0.021329540325925784,
0.02124985203188155,
0.020780972390785923,
0.02066880568875131,
0.020561794493645202,
0.020246858101090556,
0.018972985083397655,
0.018933257214840543,
0.018715792391282033,
0.017190187823654873,
0.01707047521806811,
0.016559617056037326,
0.01652114601142841,
0.016459878385661496,
0.016366047576710032,
0.016060549643620012,
0.01600124681725032,
0.015603391008248126,
0.015325451096990668,
0.014931909462061965,
0.014584649400277436,
0.014319138143222922,
0.014252466472334701,
0.014101473604987685,
0.012913302373948214,
0.012849493075983758,
0.012699687096357205,
0.012456411619077377,
0.012277470428131388,
0.011732016343616999,
0.011413994880544509,
0.011172894523428381,
0.011115235857209978,
0.010951400884296608,
0.010393495328219387,
0.01028951700065838,
0.010198806984694395,
0.010094133321323957,
0.009911602052631936,
0.009628120702108356,
0.009447232257952265,
0.009310589725521318,
0.009274189912718457,
0.008794485754912578,
0.008790638431150407,
0.008426698167767475,
0.00821006181816066,
0.008006524192099738,
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0.007759020494440776,
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0.006964814748920294,
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0.006728737349439941,
0.006705572768060158,
0.006509218107616911,
0.006427665696514277,
0.005961705222263251,
0.005504707672035389,
0.0054090062223764645,
0.00534495848248958,
0.005331107417639844,
0.00514043697147742,
0.004912800108267455,
0.0046256529739528455,
0.004609881725822224,
0.004470341736428625,
0.004210206292686908,
0.004145293310968211,
0.004020563632888582,
0.003727228348319863,
0.0034802770703983425,
0.003229847018092347,
0.0031368516280045355,
0.0030068193042229493,
0.00292046823195049,
0.0028668436173348555,
0.0027946265847715868,
0.002299326248111585,
0.0021735468745956296,
0.001875163251544629,
0.0018639820081435667,
0.001620945833976446,
0.0013112799751531,
0.0011965480745608653,
0.0011370539288381384,
0.0006444729298554806,
0.0005843138937467843,
0.00034839131285463546,
9.126720967871466e-05,
4.749011031669298e-05,
1.7200638409685523e-17
]
},
"cv_performance": {
"prediction": {
"accuracy": 67.85714285714286,
"precision": 66.24009324009323,
"recall": 61.62337662337662,
"f1": 63.54164456233421
},
"selection": {
"precision": 0.19417475728155337,
"recall": 0.5128205128205128,
"f1": 0.2816901408450704,
"jaccard": 0.14184397163120568
}
}
}