GenoTEX / output /regress /Fibromyalgia /significant_genes_condition_Obstructive_sleep_apnea.json
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{
"significant_genes": {
"Variable": [
"LTA4H",
"ANKRD20A11P",
"CCDC170",
"MIR9-1",
"HLA-L",
"PARD3B",
"CADPS",
"ENC1",
"NEIL1",
"IFT122",
"AKAP12",
"MFSD3",
"STXBP1",
"TMEM255B",
"PGM5P2",
"ELAPOR1",
"FAM167A-AS1",
"LCT",
"IFNE",
"BLVRA",
"TIGD1",
"KAT2B",
"HTN1",
"IL13",
"HLA-DQB1",
"OR1N1",
"FAM24A",
"CCNI",
"DCPS",
"OR10A7",
"ITSN1",
"MDS2",
"NDC1",
"C14orf93",
"NUDC",
"LRRC43",
"ATOH8",
"MMP12",
"RGS17",
"TBX6",
"CPT1A",
"NAPSB",
"PTP4A3",
"TTLL7",
"UQCC3",
"COL4A6",
"CFAP53",
"APBB2",
"SCG3",
"TNKS1BP1",
"MYH1",
"NEFL",
"MYLIP",
"SPHK1",
"GSDME",
"CCDC146",
"PTGDS",
"EBI3",
"RRH",
"VWA5B2",
"DERL3",
"C11orf87",
"JOSD2",
"ICA1L",
"ITGB8",
"TXNDC11",
"RDH5",
"JAKMIP3",
"PDGFRB",
"MARCHF8",
"LRRC23",
"THOC3",
"CYP27A1",
"MFSD4A",
"SLC25A47",
"TTC41P",
"LINC00272",
"POC1A",
"C1orf174",
"APIP",
"HTR3B",
"ECRG4",
"SEMA3A",
"MTNR1B",
"ZNF620",
"CPA3",
"CAMKV",
"PIDD1",
"SLC25A34",
"DVL2",
"TRPM4",
"ZNF530",
"MROH8",
"NAPSA",
"HTN3",
"MEDAG",
"SMAD9",
"CD93",
"C3orf20",
"HLA-DPB2",
"TCEAL1",
"OR4C3",
"TPO",
"HLA-DQB2",
"HMGN2P46",
"CYP26B1",
"ELL3",
"IL31RA",
"AFAP1L2",
"OSGIN1",
"CROCC",
"SERINC2",
"ADGRL1",
"MRPL38",
"NPAS3",
"TXNDC8",
"COA1",
"FOXRED1",
"SLC23A3",
"TUBB6",
"SPINK2",
"CRCT1",
"CEND1",
"FKBPL",
"SH3D19",
"GIPR",
"GCHFR",
"F7",
"RAB11FIP3",
"FBXL15",
"SCHIP1"
],
"Coefficient": [
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0.009122046546454913,
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0.005260709021283085,
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0.0006492347590987456,
0.0004274515556438225,
-0.00022791898100828076,
-2.6709676808372606e-05
],
"Absolute Coefficient": [
0.06477180602922322,
0.06375326609147558,
0.053053579014119105,
0.04854297011748804,
0.04698557853895551,
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0.0334980904622261,
0.03321079557336043,
0.03264352600685521,
0.03252837708071601,
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0.03073035124642508,
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0.02935610850445271,
0.029315676628869684,
0.029234098934477377,
0.027979222894458602,
0.027339977036637306,
0.025186160218422387,
0.025066759635780405,
0.02351724096617257,
0.023479583697701648,
0.023256738600797324,
0.02309205030906113,
0.021262855412507945,
0.021005781445308614,
0.020734336013342927,
0.020600779375716135,
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2.6709676808372606e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 68.57142857142858,
"precision": 67.33699633699635,
"recall": 62.251082251082245,
"f1": 64.3882783882784
},
"selection": {
"precision": 0.19801980198019803,
"recall": 0.5128205128205128,
"f1": 0.2857142857142857,
"jaccard": 0.14388489208633096
}
}
}