GenoTEX / output /regress /Brugada_Syndrome /significant_genes_condition_Hypertension.json
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{
"significant_genes": {
"Variable": [
"SLC16A11",
"JADE1",
"NPBWR1",
"P2RX5",
"EGR1",
"TFF2",
"GBX2",
"SLC7A13",
"CD2",
"AAAS",
"PTGR3",
"FZD1",
"BLZF1",
"B3GLCT",
"DMRT3",
"ELN",
"KDSR",
"CD209",
"IL6ST",
"ERAP2",
"RNF14",
"HOXB3",
"SEMA7A",
"MIOX",
"SCN5A",
"TRPC7",
"TNMD",
"ARHGAP11A",
"SSH2",
"AGPAT2",
"EBF3",
"ATOH8",
"KCNH2",
"UPK3B",
"FASTKD3",
"REM1",
"PHKB",
"TMEM14C",
"SLC25A19",
"MIR100",
"CENPW",
"ARRDC3",
"SPIN4",
"FOS",
"PRPF31",
"PSORS1C3",
"MAF1",
"IDI2-AS1",
"MIR517B",
"CEMIP2",
"H3C15",
"SCGB2B2",
"IDO1",
"DDX60",
"KRT86",
"LUZP1",
"KPRP",
"DRC3",
"JUNB",
"SUPT6H",
"BICC1",
"TSHZ1",
"MED7",
"MET",
"ADGRG3",
"THEM4",
"SEMA3F",
"RMRP",
"TOP2A",
"TRAPPC12",
"SHISAL2A",
"C9orf40",
"ARHGAP24",
"IRF9",
"WASHC2C",
"WASHC2A",
"VILL"
],
"Coefficient": [
-0.12404744595115523,
0.09652483422264108,
0.07432730809078524,
-0.06796998912510888,
-0.06654229613886582,
0.06636782235848891,
-0.06379690149368393,
0.06231676124306323,
0.06105879992152572,
0.06070312601295512,
0.060652925267014254,
-0.058398464586693254,
-0.05483719513976032,
0.05268431977283371,
-0.04652406730994964,
-0.0462146756085188,
0.045609378332176306,
0.04268984146427128,
0.040548133492652495,
0.04027376505639523,
-0.03706074153148578,
0.03650032282118473,
0.03619307828233955,
0.0359911112070651,
-0.03299389010222813,
-0.0304013023999291,
-0.03011476627103849,
-0.029003535498972784,
-0.027217605500127372,
-0.026473445324509164,
-0.02635902974356254,
0.025714741794340877,
-0.02401107745193479,
-0.02387354985455723,
0.022947019409754753,
-0.02166929897871821,
-0.020553901906075808,
-0.02006721082975572,
0.018948846624055323,
-0.018930649177800886,
-0.01815726444152553,
-0.01719213556086124,
-0.01705517811027798,
-0.016823489243345403,
-0.016149087982225464,
0.016021124849179138,
0.015309228373755545,
0.01507778328525297,
-0.01503192517412341,
0.014916339873425284,
-0.013002784001142192,
0.012008914063721166,
0.011325474099281323,
0.010527733200169108,
-0.010338147793799083,
0.010213559103750307,
-0.00907697897546744,
-0.007831439328771679,
-0.007287366745609837,
0.007102810457270081,
0.006382700161351248,
0.0060107756236403576,
-0.005989212709550731,
-0.005429190982593733,
-0.005232013147993513,
-0.004694736012977721,
0.004028682254735742,
0.003861271575716343,
-0.002507959599057747,
0.002469601844813872,
0.002246883675328872,
-0.001813960822343895,
0.0013413273602017669,
0.001238130517487216,
9.241748291401384e-05,
4.854702934540105e-05,
-9.185003013646491e-06
],
"Absolute Coefficient": [
0.12404744595115523,
0.09652483422264108,
0.07432730809078524,
0.06796998912510888,
0.06654229613886582,
0.06636782235848891,
0.06379690149368393,
0.06231676124306323,
0.06105879992152572,
0.06070312601295512,
0.060652925267014254,
0.058398464586693254,
0.05483719513976032,
0.05268431977283371,
0.04652406730994964,
0.0462146756085188,
0.045609378332176306,
0.04268984146427128,
0.040548133492652495,
0.04027376505639523,
0.03706074153148578,
0.03650032282118473,
0.03619307828233955,
0.0359911112070651,
0.03299389010222813,
0.0304013023999291,
0.03011476627103849,
0.029003535498972784,
0.027217605500127372,
0.026473445324509164,
0.02635902974356254,
0.025714741794340877,
0.02401107745193479,
0.02387354985455723,
0.022947019409754753,
0.02166929897871821,
0.020553901906075808,
0.02006721082975572,
0.018948846624055323,
0.018930649177800886,
0.01815726444152553,
0.01719213556086124,
0.01705517811027798,
0.016823489243345403,
0.016149087982225464,
0.016021124849179138,
0.015309228373755545,
0.01507778328525297,
0.01503192517412341,
0.014916339873425284,
0.013002784001142192,
0.012008914063721166,
0.011325474099281323,
0.010527733200169108,
0.010338147793799083,
0.010213559103750307,
0.00907697897546744,
0.007831439328771679,
0.007287366745609837,
0.007102810457270081,
0.006382700161351248,
0.0060107756236403576,
0.005989212709550731,
0.005429190982593733,
0.005232013147993513,
0.004694736012977721,
0.004028682254735742,
0.003861271575716343,
0.002507959599057747,
0.002469601844813872,
0.002246883675328872,
0.001813960822343895,
0.0013413273602017669,
0.001238130517487216,
9.241748291401384e-05,
4.854702934540105e-05,
9.185003013646491e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 61.666666666666664,
"precision": 65.66666666666666,
"recall": 56.166666666666664,
"f1": 59.57575757575758
},
"selection": {
"precision": 0.8959276018099548,
"recall": 0.909090909090909,
"f1": 0.9023584368235161,
"jaccard": 0.45687645687645684
}
}
}