GenoTEX / output /regress /Fibromyalgia /significant_genes_condition_Insomnia.json
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{
"significant_genes": {
"Variable": [
"ANKRD20A11P",
"CCDC170",
"FAM24A",
"PARD3B",
"NEIL1",
"NDC1",
"ENC1",
"LTA4H",
"ELAPOR1",
"HLA-L",
"MIR9-1",
"HTN1",
"MARCHF8",
"PGM5P2",
"MFSD3",
"IFT122",
"STXBP1",
"TTLL7",
"ITSN1",
"LCT",
"DCPS",
"IL13",
"IFNE",
"FAM167A-AS1",
"CADPS",
"TMEM255B",
"MYH1",
"NUDC",
"TXNDC11",
"OR1N1",
"HLA-DQB1",
"COL4A6",
"RGS17",
"UQCC3",
"TNKS1BP1",
"ATOH8",
"DRICH1",
"RDH5",
"CYP27A1",
"PTP4A3",
"OR10A7",
"RRH",
"MROH8",
"NAPSB",
"ELL3",
"VWA5B2",
"AKAP12",
"IL3RA",
"MDS2",
"TRPM4",
"SCG3",
"DOCK3",
"SPHK1",
"OSGIN1",
"HTN3",
"EBI3",
"KAT2B",
"CYP26B1",
"CPA3",
"BLVRA",
"CPT1A",
"SLC25A34",
"POC1A",
"DEFB119",
"CCR9",
"C1orf174",
"GSDME",
"DVL2",
"TBX6",
"LRIG3",
"MRPL38",
"LRRC23",
"CFAP53",
"C14orf93",
"MCAM",
"JOSD2",
"HPCAL4",
"MTNR1B",
"JAKMIP3",
"SMAD9",
"C9orf40",
"ADCK1",
"MST1",
"KTN1-AS1",
"CROCC",
"HLA-DPB2",
"CCNI",
"LRRC43",
"AP1M2",
"MMP12",
"ITGB8",
"SCARNA8",
"TXNDC8",
"ZNF620",
"HMGN2P46",
"THOC3",
"EHHADH",
"KIAA1656",
"LINC02912",
"LINC00272",
"CDS1",
"SNORD113-4",
"APBB2",
"TGFB2",
"LGI4",
"RNF17",
"SLC12A7",
"ECRG4",
"MIR205",
"HTR3B",
"CCDC146",
"PALLD",
"NBPF22P",
"PGAP2",
"PI3",
"PIDD1",
"DERL3",
"ICA1L",
"SALL2",
"AFAP1L2",
"MFSD4A",
"COLGALT2",
"ATP2B3",
"PEX10",
"SLC25A47",
"C3orf20",
"CLCN4",
"CHEK2",
"MIR205HG"
],
"Coefficient": [
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0.06715946884794231,
0.061644054817617276,
0.05171841180937325,
0.051388756892908935,
0.050780372746989884,
-0.05049851056117866,
0.04938958773363052,
0.04680183275894535,
0.04519999910425393,
0.04268832636208699,
0.040115415732977534,
0.040042658048892864,
-0.03948937992017921,
-0.03844137956580516,
0.036340632594312174,
0.035993084363095576,
-0.03533417840191706,
-0.034324801833270156,
0.033078382809579164,
-0.03282998241988938,
0.030990767002186732,
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0.030109421839921015,
-0.02973211942853954,
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-0.02841241861280413,
0.02828472833928635,
-0.02705159731373031,
0.026331720910249944,
0.025177797071032047,
0.024708088253773713,
0.024495009401944073,
-0.024340191261938173,
-0.023706788097225696,
0.022670767351659737,
0.021702935964029266,
0.019265055234456242,
0.019148328921292538,
-0.01909726187298247,
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-0.018396841024159553,
-0.018385779289340837,
-0.018244619425992873,
0.018196510196992956,
-0.017834093005104596,
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0.015649706179144237,
0.015354539773746324,
-0.015324030004380448,
0.014699898506486763,
0.014647820650109025,
-0.014214964702707044,
-0.014163275143376012,
-0.014008089383036462,
0.013792247223487335,
-0.013692169858419534,
-0.0135999949840424,
-0.013385465018765622,
0.013353732895713021,
0.013282733666735559,
0.012964583505262198,
0.012939074103099165,
-0.012694578649494692,
0.012591064870191647,
0.012533125228264717,
-0.011783408660054145,
0.011604143321068447,
0.011497697173405435,
0.011114569476681982,
-0.010749398146646633,
-0.0107137475263223,
-0.010707966533443462,
-0.009799107157489122,
0.00978894746123935,
0.009696658457158419,
-0.009482384209130485,
0.008840855430243153,
-0.008821635070499103,
0.00876729763823398,
0.00859283870105801,
0.008560743569542343,
-0.008531238172713314,
0.008450285919767389,
0.008409426815823635,
0.008388656019691052,
0.008380259380100213,
-0.008335891105498743,
0.008307392898031203,
-0.008262022441414168,
-0.008093561412813002,
-0.007954139319738885,
-0.006807657343150646,
0.006575730368739397,
0.0063896477631483406,
0.006372267547134351,
0.006167565840862193,
0.005868732891101873,
0.005672625668985635,
0.005464182853699161,
0.005331090523877835,
0.004801691789195405,
-0.004414681795776294,
-0.00433571320019006,
-0.0042190786120415,
-0.0036281782032413093,
-0.003155175028569665,
0.0027210431293972085,
-0.0025266076082562415,
-0.002481942642349738,
-0.002451438018822985,
-0.002343485988426061,
-0.0022214808637540323,
-0.0020202177553226173,
0.0020113955426970674,
-0.0019461803591893426,
-0.0019088445734435746,
-0.0018619356579985008,
-0.0016212164537391523,
0.0009524790177975716,
-0.0008467917295159765,
0.0006940345993246828,
-0.0005773082226584037,
0.0003447725412649986,
-0.0003084565552784828,
-0.0002856213500016524,
-7.408827655109378e-05,
3.752866562113205e-17
],
"Absolute Coefficient": [
0.07154691811507018,
0.06715946884794231,
0.061644054817617276,
0.05171841180937325,
0.051388756892908935,
0.050780372746989884,
0.05049851056117866,
0.04938958773363052,
0.04680183275894535,
0.04519999910425393,
0.04268832636208699,
0.040115415732977534,
0.040042658048892864,
0.03948937992017921,
0.03844137956580516,
0.036340632594312174,
0.035993084363095576,
0.03533417840191706,
0.034324801833270156,
0.033078382809579164,
0.03282998241988938,
0.030990767002186732,
0.030727385323922655,
0.030109421839921015,
0.02973211942853954,
0.029561628217676873,
0.02841241861280413,
0.02828472833928635,
0.02705159731373031,
0.026331720910249944,
0.025177797071032047,
0.024708088253773713,
0.024495009401944073,
0.024340191261938173,
0.023706788097225696,
0.022670767351659737,
0.021702935964029266,
0.019265055234456242,
0.019148328921292538,
0.01909726187298247,
0.01875132730145744,
0.018396841024159553,
0.018385779289340837,
0.018244619425992873,
0.018196510196992956,
0.017834093005104596,
0.017530098735794974,
0.016842739830190624,
0.015649706179144237,
0.015354539773746324,
0.015324030004380448,
0.014699898506486763,
0.014647820650109025,
0.014214964702707044,
0.014163275143376012,
0.014008089383036462,
0.013792247223487335,
0.013692169858419534,
0.0135999949840424,
0.013385465018765622,
0.013353732895713021,
0.013282733666735559,
0.012964583505262198,
0.012939074103099165,
0.012694578649494692,
0.012591064870191647,
0.012533125228264717,
0.011783408660054145,
0.011604143321068447,
0.011497697173405435,
0.011114569476681982,
0.010749398146646633,
0.0107137475263223,
0.010707966533443462,
0.009799107157489122,
0.00978894746123935,
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0.009482384209130485,
0.008840855430243153,
0.008821635070499103,
0.00876729763823398,
0.00859283870105801,
0.008560743569542343,
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0.008262022441414168,
0.008093561412813002,
0.007954139319738885,
0.006807657343150646,
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0.006167565840862193,
0.005868732891101873,
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0.005464182853699161,
0.005331090523877835,
0.004801691789195405,
0.004414681795776294,
0.00433571320019006,
0.0042190786120415,
0.0036281782032413093,
0.003155175028569665,
0.0027210431293972085,
0.0025266076082562415,
0.002481942642349738,
0.002451438018822985,
0.002343485988426061,
0.0022214808637540323,
0.0020202177553226173,
0.0020113955426970674,
0.0019461803591893426,
0.0019088445734435746,
0.0018619356579985008,
0.0016212164537391523,
0.0009524790177975716,
0.0008467917295159765,
0.0006940345993246828,
0.0005773082226584037,
0.0003447725412649986,
0.0003084565552784828,
0.0002856213500016524,
7.408827655109378e-05,
3.752866562113205e-17
]
},
"cv_performance": {
"prediction": {
"accuracy": 59.999999999999986,
"precision": 55.1082251082251,
"recall": 54.63203463203463,
"f1": 53.9485827072034
},
"selection": {
"precision": 0.19417475728155337,
"recall": 0.5128205128205128,
"f1": 0.2816901408450704,
"jaccard": 0.14184397163120568
}
}
}