GenoTEX / output /regress /Bone_Density /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"METTL4",
"RAB2A",
"IL17RA",
"GLT8D2",
"SKAP2",
"PDPK1",
"DESI2",
"HIRA",
"IL1R2",
"GMEB1",
"RPL3L",
"CDC42EP3",
"SOAT2",
"DHX35",
"SSX5",
"ZFPM2",
"SLC45A2",
"KLHL4",
"FCGR2A",
"VPS37C",
"SEC14L1P1",
"SSX7"
],
"Coefficient": [
-0.06312890622043961,
0.06224189416536785,
0.059160815913372966,
-0.046842624934534866,
-0.03260872360860516,
-0.0319963528890561,
0.02608819740127215,
0.022605469724839546,
-0.02097429043011745,
0.019326356586420665,
-0.017024392682854696,
0.01643320726085289,
0.01345419631975273,
-0.008328496687323269,
-0.0057803614019012114,
-0.0029054921062419137,
0.002829564590402067,
-0.0025698049338907848,
-0.0025376727750701543,
-0.002400870206267958,
-0.0009938598361502573,
-6.661338147750938e-17
],
"Absolute Coefficient": [
0.06312890622043961,
0.06224189416536785,
0.059160815913372966,
0.046842624934534866,
0.03260872360860516,
0.0319963528890561,
0.02608819740127215,
0.022605469724839546,
0.02097429043011745,
0.019326356586420665,
0.017024392682854696,
0.01643320726085289,
0.01345419631975273,
0.008328496687323269,
0.0057803614019012114,
0.0029054921062419137,
0.002829564590402067,
0.0025698049338907848,
0.0025376727750701543,
0.002400870206267958,
0.0009938598361502573,
6.661338147750938e-17
]
},
"cv_performance": {
"prediction": {
"accuracy": 71.25,
"precision": 71.38888888888889,
"recall": 77.43939393939395,
"f1": 71.11560953666216
},
"selection": {
"precision": 6.514285714285714,
"recall": 0.5144694533762058,
"f1": 0.9521417495903363,
"jaccard": 0.4789146323386885
}
}
}