GenoTEX / output /regress /Depression /significant_genes_condition_Hypertension.json
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{
"significant_genes": {
"Variable": [
"IFRD2",
"CASC5",
"FAM24A",
"LILRA3",
"KRTAP21-1",
"SPATS2L",
"CNGA3",
"SYNM",
"TRBV27",
"SYCP2L",
"GSDMB",
"RNASE3",
"RMDN3",
"CDKN2B-AS1",
"RP11-1L12",
"PTPDC1",
"CTD-2639E6",
"HEXDC",
"TMEM45A",
"FLJ31715",
"TMEM242",
"CCL4",
"YEATS2",
"EIF3CL",
"FNDC1",
"CCT6P1",
"HIVEP3",
"SLCO2A1",
"EPDR1",
"UBE3B",
"C10orf113",
"LTF",
"CFD",
"GEM",
"FBLN5",
"MRI1",
"SLC26A4",
"NEFL",
"MUC7",
"ZG16B",
"FCER1G",
"PEX6",
"DNER",
"CAB39L",
"NRCAM",
"VNN1",
"RAPGEF4",
"FLJ31356",
"C20orf85",
"GPR1-AS",
"KCTD11",
"MYL6B",
"VSIG10",
"MAGEA9",
"NGFRAP1",
"BSPRY",
"EFNB2",
"GTF2H2B",
"MYOC",
"MGP",
"TRBV25-1",
"ERMAP",
"LIMS3",
"CAV2",
"SIK1",
"KRT77",
"ZNF625",
"RP11-796E2",
"TNRC6C",
"HERC2P3",
"LPL",
"TMEM220",
"KRT1",
"CEACAM8",
"SLC2A6",
"HIST1H1C",
"BUB1B",
"RPH3A",
"UVSSA",
"TRAV10",
"AK098263",
"ATP7A",
"CNTF",
"PLEK",
"SNX7",
"ALMS1-IT1",
"CPVL",
"TOP1MT",
"RP13-638C3",
"SIGLECL1",
"MCC",
"GSG2",
"AJ011981",
"RALY-AS1",
"SGSM3",
"MGC4836",
"VPS33A",
"SLC30A10",
"NAPRT",
"LYZ",
"FGF9",
"PKHD1L1",
"RIMS3",
"POMK",
"PSORS1C3",
"MIR4697",
"CABP7",
"ISM1",
"INTS4",
"TCRAVN1",
"CAND2",
"RNF175",
"NDST2",
"CSN2",
"CSNK1A1P1",
"BRS3",
"COG1",
"C15orf48",
"C1orf54",
"RHEBL1",
"RP11-29P20",
"LGALS4",
"PROX1",
"MIR4697HG"
],
"Coefficient": [
-0.06404478564202781,
-0.060493261441767816,
-0.05337051268210055,
-0.05298683572001862,
0.049941206771228965,
0.048790838119116775,
-0.048483031054867454,
0.04832028639265198,
-0.04826804849081353,
-0.043188425265218995,
-0.042676325641042026,
0.04183322088099634,
-0.03892655206960701,
0.03882742453237735,
0.03640866109624063,
0.035937550101003635,
-0.03485805845848205,
-0.03435867685869695,
0.034093488565382496,
0.03367480193091535,
0.031721487164883856,
0.029246676330583563,
0.029027923734049083,
0.02845884035438935,
-0.028116313069112022,
0.027724091956625865,
0.027292828475720517,
-0.027229731651239857,
0.027072246436694987,
0.02699559103701702,
-0.026087468442637804,
0.025059842650277612,
0.024450595754577368,
-0.02410678554207351,
-0.02377650546143993,
-0.02330416605105024,
-0.023172098465324326,
-0.022954144507046765,
0.022499644435324945,
-0.021692878566878866,
-0.020373980135035923,
-0.019660229666573218,
0.019311506710029517,
0.018889612169367853,
0.018802065092420914,
0.018404984291915068,
0.018178019079630056,
0.01812774195171602,
-0.018046971320896506,
-0.017777851878854105,
-0.01757670700914956,
-0.01730602167130877,
-0.01684489909168187,
0.01664346407027612,
-0.016606257242951075,
0.016297526348234184,
0.015586225558531605,
-0.014632260290401832,
0.014365817390146774,
0.014110825597414618,
0.013495228150920184,
0.012825467780091807,
-0.012693090876334235,
-0.012280866012452563,
0.011649058182260629,
0.011281174337051612,
-0.011098751818297206,
-0.010326608382046692,
0.010294759415821414,
0.010185325981557119,
-0.010155146112456865,
0.010128474296261358,
-0.009949417165837355,
0.00985147415460794,
-0.009742435019258238,
0.008705040254348146,
0.008693200063349558,
-0.008555143206451074,
-0.007085123321972227,
0.006698654161418632,
0.006474288245880764,
0.006216897613827952,
0.006007454902656097,
-0.005420193541281507,
0.005396649659214068,
-0.005231346401258699,
-0.005108832491144055,
0.005076912489526062,
-0.004667401537256223,
0.00452585412242641,
0.004459439612093902,
-0.004438547728653933,
0.004345973617016838,
0.004120275630933497,
0.004117009709335213,
-0.003760348554860671,
-0.0037513751568573595,
0.003553263040448816,
-0.002956328662812065,
-0.00275779009744349,
0.002740890809922249,
-0.002647520640642181,
0.002494770251810075,
-0.0021923966034114143,
0.0020041430099644645,
-0.0018722890092923645,
0.0018351630122034794,
-0.0017123533466441414,
-0.0014464887445848373,
-0.0014204675328475915,
-0.001384111372624575,
-0.0012454703523994332,
0.0008917942512518125,
0.0006844003572696581,
-0.0006673867614500953,
-0.0006541299564759469,
0.0004328271712096058,
0.00039061037006955996,
-0.0002691953884233949,
-0.00019563629762773296,
0.00013856767296304296,
7.329553015514595e-05,
6.353569092670338e-05,
-1.0185532336010611e-18
],
"Absolute Coefficient": [
0.06404478564202781,
0.060493261441767816,
0.05337051268210055,
0.05298683572001862,
0.049941206771228965,
0.048790838119116775,
0.048483031054867454,
0.04832028639265198,
0.04826804849081353,
0.043188425265218995,
0.042676325641042026,
0.04183322088099634,
0.03892655206960701,
0.03882742453237735,
0.03640866109624063,
0.035937550101003635,
0.03485805845848205,
0.03435867685869695,
0.034093488565382496,
0.03367480193091535,
0.031721487164883856,
0.029246676330583563,
0.029027923734049083,
0.02845884035438935,
0.028116313069112022,
0.027724091956625865,
0.027292828475720517,
0.027229731651239857,
0.027072246436694987,
0.02699559103701702,
0.026087468442637804,
0.025059842650277612,
0.024450595754577368,
0.02410678554207351,
0.02377650546143993,
0.02330416605105024,
0.023172098465324326,
0.022954144507046765,
0.022499644435324945,
0.021692878566878866,
0.020373980135035923,
0.019660229666573218,
0.019311506710029517,
0.018889612169367853,
0.018802065092420914,
0.018404984291915068,
0.018178019079630056,
0.01812774195171602,
0.018046971320896506,
0.017777851878854105,
0.01757670700914956,
0.01730602167130877,
0.01684489909168187,
0.01664346407027612,
0.016606257242951075,
0.016297526348234184,
0.015586225558531605,
0.014632260290401832,
0.014365817390146774,
0.014110825597414618,
0.013495228150920184,
0.012825467780091807,
0.012693090876334235,
0.012280866012452563,
0.011649058182260629,
0.011281174337051612,
0.011098751818297206,
0.010326608382046692,
0.010294759415821414,
0.010185325981557119,
0.010155146112456865,
0.010128474296261358,
0.009949417165837355,
0.00985147415460794,
0.009742435019258238,
0.008705040254348146,
0.008693200063349558,
0.008555143206451074,
0.007085123321972227,
0.006698654161418632,
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0.006216897613827952,
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0.005231346401258699,
0.005108832491144055,
0.005076912489526062,
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0.00452585412242641,
0.004459439612093902,
0.004438547728653933,
0.004345973617016838,
0.004120275630933497,
0.004117009709335213,
0.003760348554860671,
0.0037513751568573595,
0.003553263040448816,
0.002956328662812065,
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0.002740890809922249,
0.002647520640642181,
0.002494770251810075,
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0.0020041430099644645,
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0.0018351630122034794,
0.0017123533466441414,
0.0014464887445848373,
0.0014204675328475915,
0.001384111372624575,
0.0012454703523994332,
0.0008917942512518125,
0.0006844003572696581,
0.0006673867614500953,
0.0006541299564759469,
0.0004328271712096058,
0.00039061037006955996,
0.0002691953884233949,
0.00019563629762773296,
0.00013856767296304296,
7.329553015514595e-05,
6.353569092670338e-05,
1.0185532336010611e-18
]
},
"cv_performance": {
"prediction": {
"accuracy": 71.42857142857142,
"precision": 69.25016160310278,
"recall": 88.28571428571429,
"f1": 76.44943019943021
},
"selection": {
"precision": 1.7296108294883221,
"recall": 0.6060606060606059,
"f1": 0.8971659634035543,
"jaccard": 0.45147487600388336
}
}
}