GenoTEX / output /regress /Hypertension /significant_genes_condition_Cardiovascular_Disease.json
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{
"significant_genes": {
"Variable": [
"COPS3",
"PTRH2",
"TTC21B",
"BET1",
"NSD1",
"TMC4",
"TP53I3",
"KAZALD1",
"AP3B1",
"INTS9",
"LSM1",
"SUPT16H",
"GBA1LP",
"IL17REL",
"PSG8",
"CHM",
"DDX11L9",
"S100A9",
"TCEAL8",
"PRKAG3",
"PAIP2B",
"PKP1",
"TGFB2",
"IRF1",
"RHOA",
"LAMA3",
"SYT12",
"DKK3",
"SLC46A1",
"CARD17P",
"FASTKD1",
"OTULIN",
"PHTF2",
"HOXA9",
"SNAR-I",
"WRAP73",
"NEO1",
"HSD17B11",
"SELENOW",
"SPHK1",
"SNORD36A",
"C19orf53",
"PSCA",
"ISG20",
"ARSI",
"GCLC",
"GPC2",
"WHAMMP2",
"RARRES1",
"CYP1B1",
"RAB11FIP4",
"GSTO1",
"IFIH1",
"TRAPPC12",
"CLIP4",
"LIPA",
"INKA2",
"CYREN",
"ANK1",
"GNG5",
"FAM177A1",
"TPTE2",
"CCDC106",
"LZTS2",
"POLRMT",
"MRTO4",
"APOBEC3B",
"SPX",
"LRRD1",
"ARID3A",
"TGM2",
"FOSB",
"HFE",
"SLC7A6OS",
"CCDC71L",
"URGCP",
"BNIP2",
"TMEM119",
"TMCC2",
"GEMIN4",
"MARCHF9",
"GGCX",
"RPUSD4",
"EIF5AL1",
"H4C4",
"RPL14",
"DARS1",
"CBLN3",
"MALSU1",
"GLI2",
"EGR1",
"TTC23",
"RAB21",
"PROK1",
"RINT1",
"SNAP29",
"ZNF33B",
"SDF2L1",
"SLC6A12",
"PTPN12",
"CSKMT",
"PRAMEF15",
"GSTA2",
"GPAT2",
"SLC1A2",
"RMDN1",
"TREM1",
"LHFPL2",
"CHIT1",
"SKA2",
"ETAA1"
],
"Coefficient": [
-0.0521348811985606,
0.041922120639721526,
0.038553163790055286,
-0.035238491828575774,
0.024303851727983966,
-0.02217514906569269,
-0.021561402892718514,
0.02134453703626005,
0.02001676698616905,
-0.019719559111681963,
0.019335079319099138,
0.017002027160606753,
0.014432182785430528,
0.01434075883470413,
0.01306580187735164,
-0.012995160765374401,
0.012521651813877358,
0.01223563865970208,
-0.011665051439595918,
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0.010072162575228963,
0.010062929728563845,
-0.009865374056416935,
0.00974373822540136,
-0.00973065184664661,
-0.00946610652613783,
0.009126268333933001,
-0.007635952664613778,
-0.007466907618777289,
0.007075595062511051,
-0.007017840144430945,
-0.007014373572585902,
-0.007008181676000603,
-0.006730456696143808,
-0.006418226464559636,
-0.006306910010167016,
-0.00624586864923849,
0.005781890310701653,
0.005745075364241521,
-0.0056466492284293224,
-0.0055768451448814605,
0.00547136710751246,
-0.00546011739191166,
0.005403527183321299,
0.0053311665000617126,
-0.0052282075922432236,
0.005163202723226086,
0.005073559005137257,
0.004958787757298929,
0.004771429367613557,
0.004760619371103554,
0.004461709328129048,
0.004403884376034556,
-0.004207063841989592,
0.0041267017704546445,
0.004111322004487072,
-0.0038663335230563474,
-0.003836472340202392,
0.0035568707986104986,
0.003518505626032898,
0.0033624748105332233,
-0.003325591709444686,
-0.0033077045542457377,
-0.0033032115310429877,
-0.0032733141548476966,
0.003262421474362541,
0.003117861902332228,
-0.0030827289882377827,
0.0029221647384772894,
-0.0027355161735491762,
0.0027339235030057947,
-0.0027000758194052265,
0.0026758720533292084,
0.0026599283268075417,
0.0026458129250293005,
0.002640263041592056,
-0.002577885684539095,
0.002502976945501762,
0.0023954958182411078,
-0.002382315367104847,
-0.0022932988691358805,
0.0022298540436839908,
-0.0021231599417661316,
-0.002052803221071048,
0.0020048107363635987,
0.0018510897077086206,
-0.0018273905901232794,
-0.0017541187871851804,
0.0017399816805442202,
-0.0017023284708862756,
-0.0015551588420350281,
0.001450803184162816,
0.0013804106809888114,
-0.001232143373218676,
-0.0012035465228279803,
-0.00117660804010006,
-0.001104963907976014,
0.0011037995368536114,
0.0010699034166172575,
0.0009256252095837456,
0.000894945921523603,
0.0006182166356265889,
-0.0005978804280439517,
-0.0004756450578887199,
0.0004563436500126659,
0.00033692922025507527,
0.000303153996312846,
0.0002328859356745559,
-0.0001822951463751678,
0.00010372110426403198,
-2.0785272325300224e-05
],
"Absolute Coefficient": [
0.0521348811985606,
0.041922120639721526,
0.038553163790055286,
0.035238491828575774,
0.024303851727983966,
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0.02134453703626005,
0.02001676698616905,
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0.017002027160606753,
0.014432182785430528,
0.01434075883470413,
0.01306580187735164,
0.012995160765374401,
0.012521651813877358,
0.01223563865970208,
0.011665051439595918,
0.010384639973097083,
0.010072162575228963,
0.010062929728563845,
0.009865374056416935,
0.00974373822540136,
0.00973065184664661,
0.00946610652613783,
0.009126268333933001,
0.007635952664613778,
0.007466907618777289,
0.007075595062511051,
0.007017840144430945,
0.007014373572585902,
0.007008181676000603,
0.006730456696143808,
0.006418226464559636,
0.006306910010167016,
0.00624586864923849,
0.005781890310701653,
0.005745075364241521,
0.0056466492284293224,
0.0055768451448814605,
0.00547136710751246,
0.00546011739191166,
0.005403527183321299,
0.0053311665000617126,
0.0052282075922432236,
0.005163202723226086,
0.005073559005137257,
0.004958787757298929,
0.004771429367613557,
0.004760619371103554,
0.004461709328129048,
0.004403884376034556,
0.004207063841989592,
0.0041267017704546445,
0.004111322004487072,
0.0038663335230563474,
0.003836472340202392,
0.0035568707986104986,
0.003518505626032898,
0.0033624748105332233,
0.003325591709444686,
0.0033077045542457377,
0.0033032115310429877,
0.0032733141548476966,
0.003262421474362541,
0.003117861902332228,
0.0030827289882377827,
0.0029221647384772894,
0.0027355161735491762,
0.0027339235030057947,
0.0027000758194052265,
0.0026758720533292084,
0.0026599283268075417,
0.0026458129250293005,
0.002640263041592056,
0.002577885684539095,
0.002502976945501762,
0.0023954958182411078,
0.002382315367104847,
0.0022932988691358805,
0.0022298540436839908,
0.0021231599417661316,
0.002052803221071048,
0.0020048107363635987,
0.0018510897077086206,
0.0018273905901232794,
0.0017541187871851804,
0.0017399816805442202,
0.0017023284708862756,
0.0015551588420350281,
0.001450803184162816,
0.0013804106809888114,
0.001232143373218676,
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0.00117660804010006,
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0.0010699034166172575,
0.0009256252095837456,
0.000894945921523603,
0.0006182166356265889,
0.0005978804280439517,
0.0004756450578887199,
0.0004563436500126659,
0.00033692922025507527,
0.000303153996312846,
0.0002328859356745559,
0.0001822951463751678,
0.00010372110426403198,
2.0785272325300224e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 95.55555555555554,
"precision": 0.0,
"recall": 0.0,
"f1": 0.0
},
"selection": {
"precision": 7.08558352402746,
"recall": 1.9047619047619044,
"f1": 2.9993303981562405,
"jaccard": 1.52389283068938
}
}
}