GenoTEX / output /regress /Hypertension /significant_genes_condition_Chronic_kidney_disease.json
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{
"significant_genes": {
"Variable": [
"COPS3",
"PTRH2",
"BET1",
"TTC21B",
"NSD1",
"INTS9",
"KAZALD1",
"AP3B1",
"TMC4",
"TP53I3",
"LSM1",
"TCEAL8",
"SUPT16H",
"GBA1LP",
"S100A9",
"DDX11L9",
"CHM",
"PRKAG3",
"PSG8",
"PKP1",
"PHTF2",
"PAIP2B",
"IL17REL",
"LAMA3",
"SYT12",
"DKK3",
"FASTKD1",
"RHOA",
"TGFB2",
"SNAR-I",
"WHAMMP2",
"IRF1",
"SLC46A1",
"LIPA",
"CARD17P",
"RAB11FIP4",
"SELENOW",
"POLRMT",
"GSTO1",
"NEO1",
"SPX",
"OTULIN",
"CLIP4",
"HSD17B11",
"SPHK1",
"C19orf53",
"SNORD36A",
"INKA2",
"IFIH1",
"TMCC2",
"HOXA9",
"TRAPPC12",
"ISG20",
"PDSS2",
"FAM177A1",
"MRTO4",
"GCLC",
"MARCHF9",
"LRRD1",
"CYREN",
"WRAP73",
"RPL14",
"H4C4",
"LZTS2",
"TREM1",
"RAB21",
"GEMIN4",
"GSTA2",
"GLI2",
"PSCA",
"ZNF33B",
"GPC2",
"HFE",
"MBD3",
"GNL3",
"GNG5",
"APOBEC3B",
"ARSI",
"H1-10",
"CSKMT",
"TTC23",
"FABP4",
"SLC1A2",
"ANK1",
"SLC7A6OS",
"ARID3A",
"LGALS3",
"NEDD9",
"PRAMEF15",
"CYP1B1",
"ZFAND2A",
"RARRES1",
"PROK1",
"PNRC2",
"LHFPL2",
"PTPN12",
"RINT1",
"ANKZF1",
"ATXN7L1",
"FOSB",
"TPTE2",
"FAAH2",
"TUSC2",
"DENND6A",
"CCDC71L",
"RMDN1",
"TMEM119",
"SDF2L1",
"HS6ST1",
"SLC6A12"
],
"Coefficient": [
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0.044090021761625325,
-0.03507406310459715,
0.03273639873332245,
0.030137807453202135,
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0.020071911073140474,
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-0.009650402310462856,
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-0.0077215578203786005,
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-0.005451154274663864,
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-0.002556579911543009,
0.0025329665266052427,
0.002474302418091008,
-0.002470296389499518,
-0.0023516154515393177,
0.002151032833100755,
0.0021368001868675374,
0.0019968755479598693,
0.0019450311527462265,
0.0019224875531060278,
0.0016499110002117531,
0.0016045830422935531,
0.00159330388684995,
0.0015587858283173915,
0.001519847743175759,
-0.0014577144175970463,
-0.0014439764303852437,
-0.001428687008135532,
0.0013807173899937446,
0.001344451418964535,
0.0013049178446547472,
0.0012433051181898918,
-0.0012143993188156745,
0.0011201211460955996,
0.0010947732064334951,
0.000907414711111699,
-0.0008357672831159279,
-0.0007513315885194744,
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-0.0006534066513207408,
-0.0006426940421535539,
0.0005658134977078835,
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0.0003019772258934057,
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0.0001419046481834995,
0.0001209506610199753,
-9.231577729156145e-05,
4.572935495537335e-05
],
"Absolute Coefficient": [
0.04775704164369101,
0.044090021761625325,
0.03507406310459715,
0.03273639873332245,
0.030137807453202135,
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0.01067548728657969,
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0.01020609823937268,
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0.009437145667876946,
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0.008976675325094984,
0.008695011370436953,
0.008284209499427014,
0.0081171616737928,
0.00805756035937071,
0.0077215578203786005,
0.0070777329539009936,
0.006995730531890058,
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0.006189915307153507,
0.006006719079164175,
0.005968248054611544,
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0.005951178754707868,
0.005605359601915958,
0.005524923836216832,
0.005469819946196322,
0.005451154274663864,
0.005170652033138973,
0.005094549422076878,
0.005012712454207393,
0.004976043147988725,
0.004907938598376498,
0.004625529070236666,
0.004361919313333705,
0.004137916818738204,
0.003930103848372858,
0.003896610117236127,
0.00383139300425077,
0.003750282303498373,
0.003581852168716489,
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0.003477156494694101,
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0.003275122097703792,
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0.003002369193524954,
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0.0029703958323603406,
0.002760278255197868,
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0.0016499110002117531,
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0.00022103368375300602,
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0.0001209506610199753,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 95.55555555555554,
"precision": 0.0,
"recall": 0.0,
"f1": 0.0
},
"selection": {
"precision": 6.113576466306708,
"recall": 1.607142857142857,
"f1": 2.5425289392207704,
"jaccard": 1.2882910970972488
}
}
}