GenoTEX / output /regress /Hypertension /significant_genes_condition_Huntingtons_Disease.json
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{
"significant_genes": {
"Variable": [
"COPS3",
"PTRH2",
"TTC21B",
"BET1",
"NSD1",
"TMC4",
"INTS9",
"KAZALD1",
"AP3B1",
"SUPT16H",
"TP53I3",
"TCEAL8",
"LSM1",
"PRKAG3",
"GBA1LP",
"CHM",
"PKP1",
"PSG8",
"IL17REL",
"DDX11L9",
"S100A9",
"FASTKD1",
"SLC46A1",
"SYT12",
"DKK3",
"SELENOW",
"CARD17P",
"PAIP2B",
"WHAMMP2",
"TGFB2",
"RHOA",
"PHTF2",
"LAMA3",
"SPX",
"HOXA9",
"HSD17B11",
"SNAR-I",
"NEO1",
"IFIH1",
"ISG20",
"H4C4",
"EGR1",
"TMCC2",
"C19orf53",
"RARRES1",
"INKA2",
"IRF1",
"RAB21",
"POLRMT",
"WRAP73",
"LIPA",
"SNORD36A",
"GPC2",
"OTULIN",
"LZTS2",
"GCLC",
"RPL14",
"GNG5",
"SMPD2",
"TTC23",
"GPAT2",
"PSCA",
"AHSP",
"RAB11FIP4",
"CYREN",
"HFE",
"ARSI",
"TREM1",
"FABP4",
"ATP5F1C",
"ZNF33B",
"CLIP4",
"SLC7A6OS",
"ATXN7L1",
"MRTO4",
"VPS41",
"HSPG2",
"LRRD1",
"TRAPPC12",
"RINT1",
"MARCHF9",
"GSTO1",
"PDSS2",
"GGCX",
"EIF5AL1",
"CSKMT",
"FAAH2",
"TPTE2",
"LGALS3",
"SDF2L1",
"GNL3",
"ARID3A",
"NEDD9",
"CCDC71L",
"SNAP29",
"CFC1",
"GSTA2",
"TGM2",
"SLC6A12",
"DARS1",
"EDF1",
"H1-10",
"GEMIN4",
"C8orf82",
"APOBEC3B",
"RSAD2",
"ANKZF1",
"CYP1B1",
"BNIP2",
"AP2S1",
"PROK1",
"ANGPT2"
],
"Coefficient": [
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0.0370963132246863,
-0.03416815679162683,
0.030720153219615253,
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0.02138276038702454,
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0.020143443367323217,
-0.020109815279136443,
-0.01947120513441069,
0.016064207569951427,
-0.016013500146409947,
0.01585710220780261,
-0.013777797848909567,
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-0.010668546450191482,
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-0.009628290343017413,
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0.00861790347954082,
-0.008316513984138484,
-0.008166286949824882,
-0.006984739292071093,
-0.006173585840945957,
-0.005962381537545539,
-0.00593915402687781,
0.00587627767978706,
-0.005873010606982702,
-0.005632561591649317,
0.005440406379601086,
0.005269699246668604,
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-0.005088700480216503,
0.004953427096610258,
0.004945434248022905,
0.0047122769304493405,
-0.004611209782719715,
0.004541718245011478,
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-0.004265578659831079,
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0.004084639531310755,
-0.004080329015556344,
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-0.003725588518444813,
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-0.003623876838154422,
0.0034562862883456436,
0.0033116531710387187,
-0.0031932079935059437,
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-0.0031086645918177013,
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0.00277319700175568,
-0.002729265841087992,
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0.00226920467475702,
-0.002090249406154042,
-0.0020864974575282194,
0.002079109411237881,
0.0019561523330506557,
0.0019505971669638064,
0.0019399630101538516,
-0.0019185917657836905,
-0.0018126587514480656,
0.0017940394709139859,
-0.0017653071387442815,
-0.0017625394569123008,
-0.0017530119931094788,
0.0017204899583612792,
-0.0015491714965357698,
0.0014595390544838525,
-0.0014520907392802903,
0.0013504080940970912,
0.001340041581047801,
-0.0013313091462423033,
-0.0013302972816869572,
0.0013269897210689352,
-0.0012775770376588112,
-0.0011884780508809416,
-0.0011699028977753797,
0.0011059831847212694,
-0.0009645770989165645,
-0.0009033730190581662,
-0.0008460632306349414,
0.0008307099640400814,
0.000792646090124428,
-0.0007906849969650802,
0.0007797159770867672,
0.00075452692812342,
-0.0006818112510428341,
-0.0006320953717404539,
0.0005584476285345877,
0.0005551245437422137,
-0.0004965849079617463,
0.0004375470481081108,
-0.0003030346271636907,
9.506329034145213e-05,
-7.56149975936086e-05,
4.675300181830645e-05
],
"Absolute Coefficient": [
0.04896850509200407,
0.04637530412579549,
0.0370963132246863,
0.03416815679162683,
0.030720153219615253,
0.02176577782376804,
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0.01947120513441069,
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0.016013500146409947,
0.01585710220780261,
0.013777797848909567,
0.013131398752969753,
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0.011750032655739536,
0.01101726307498091,
0.01069691663649401,
0.010668546450191482,
0.010502717172941382,
0.010272392576008689,
0.009628290343017413,
0.009387297102965379,
0.008997557464183717,
0.008939230649473988,
0.00861790347954082,
0.008316513984138484,
0.008166286949824882,
0.006984739292071093,
0.006173585840945957,
0.005962381537545539,
0.00593915402687781,
0.00587627767978706,
0.005873010606982702,
0.005632561591649317,
0.005440406379601086,
0.005269699246668604,
0.005254303019256081,
0.005088700480216503,
0.004953427096610258,
0.004945434248022905,
0.0047122769304493405,
0.004611209782719715,
0.004541718245011478,
0.004481441691572441,
0.004265578659831079,
0.0041941703565590675,
0.004084639531310755,
0.004080329015556344,
0.003831554244219814,
0.003725588518444813,
0.003709799927408737,
0.003623876838154422,
0.0034562862883456436,
0.0033116531710387187,
0.0031932079935059437,
0.0031690968157124977,
0.0031086645918177013,
0.00307671390503039,
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0.00277319700175568,
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0.0026936328014534154,
0.002480022223266154,
0.002432569194195304,
0.00226920467475702,
0.002090249406154042,
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0.0019561523330506557,
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0.0013504080940970912,
0.001340041581047801,
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0.0004965849079617463,
0.0004375470481081108,
0.0003030346271636907,
9.506329034145213e-05,
7.56149975936086e-05,
4.675300181830645e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 94.44444444444444,
"precision": 0.0,
"recall": 0.0,
"f1": 0.0
},
"selection": {
"precision": 6.248319104434274,
"recall": 1.7261904761904758,
"f1": 2.7007683623091125,
"jaccard": 1.370192363231022
}
}
}