GenoTEX / output /regress /Hypertension /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"COPS3",
"PTRH2",
"BET1",
"TTC21B",
"NSD1",
"INTS9",
"TCEAL8",
"LSM1",
"TMC4",
"TP53I3",
"AP3B1",
"KAZALD1",
"GBA1LP",
"SUPT16H",
"S100A9",
"PRKAG3",
"CHM",
"IL17REL",
"DDX11L9",
"PKP1",
"PSG8",
"PAIP2B",
"SYT12",
"DKK3",
"PHTF2",
"FASTKD1",
"SLC46A1",
"IRF1",
"LAMA3",
"TGFB2",
"WHAMMP2",
"RHOA",
"GSTO1",
"LIPA",
"CARD17P",
"NEO1",
"TRAPPC12",
"C19orf53",
"SPX",
"RAB11FIP4",
"CLIP4",
"HOXA9",
"SELENOW",
"RAB21",
"FAM177A1",
"POLRMT",
"WRAP73",
"GNL3",
"INKA2",
"GCLC",
"PSCA",
"HSD17B11",
"SNAR-I",
"TMCC2",
"RPL14",
"ISG20",
"SNORD36A",
"SPHK1",
"OTULIN",
"GSTA2",
"MBD3",
"ARSI",
"HFE",
"GPC2",
"GLI2",
"IFIH1",
"LZTS2",
"CSKMT",
"MRTO4",
"TREM1",
"GEMIN4",
"LRRD1",
"LGALS3",
"CYREN",
"CYP1B1",
"RARRES1",
"CCDC71L",
"PROK1",
"SDF2L1",
"FOSB",
"TUSC2",
"MARCHF9",
"ANK1",
"SLC1A2",
"TTC23",
"ANKZF1",
"APOBEC3B",
"DARS1",
"ZNF33B",
"EGR1",
"FABP4",
"PRAMEF15",
"ETAA1",
"SLC7A6OS",
"ARID3A",
"PDSS2",
"GPAT2",
"H1-10",
"RSAD2",
"TUBA4A",
"HS6ST1",
"ZFAND2A",
"LHFPL2",
"CLTCL1",
"URGCP",
"AHSP",
"PNRC2",
"RINT1",
"ATXN7L1",
"GGCX"
],
"Coefficient": [
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-0.038617081332487466,
0.03254372258608276,
0.030415149328782264,
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-0.0094829997518351,
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-0.0021323266252735733,
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-0.0019121435379757304,
-0.001827299575211747,
0.0016553553377212685,
0.0015947473887310203,
0.001571263513879373,
-0.0015583425567743808,
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-0.0015461190798336027,
0.001385339028300109,
-0.0013251465875490538,
0.0013123301242965741,
0.0012840942716994615,
0.0012650335723243368,
-0.001222937029433078,
0.0011979313733077885,
-0.0011893757890870198,
-0.0011331929891260628,
-0.0011197356214946888,
0.0010215258625988458,
0.0009237237913739028,
-0.0008708763159961845,
0.0008684056831251291,
-0.0008572075109564532,
-0.0007748422072013747,
-0.0007705733198894397,
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-0.0005484512023718561,
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0.0005243172074022009,
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0.00019357801745896192,
-0.00019111892793577636,
0.00016351314160255553,
9.102599726716612e-05
],
"Absolute Coefficient": [
0.04687414699381116,
0.04448219639667352,
0.038617081332487466,
0.03254372258608276,
0.030415149328782264,
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0.007356559263142369,
0.0072894391672942505,
0.007085742332919245,
0.00674456315100407,
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0.0059688123963004035,
0.005819558500833126,
0.005728363029179193,
0.005641856660086577,
0.0051269593822143205,
0.005068982003567372,
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0.0048791008170199655,
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0.004531927534059149,
0.0045015397439045,
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0.001385339028300109,
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9.102599726716612e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 95.55555555555554,
"precision": 0.0,
"recall": 0.0,
"f1": 0.0
},
"selection": {
"precision": 6.781425461851872,
"recall": 1.845238095238095,
"f1": 2.898525541581711,
"jaccard": 1.4718587726929955
}
}
}