GenoTEX / output /regress /Hypertension /significant_genes_condition_Osteoarthritis.json
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{
"significant_genes": {
"Variable": [
"COPS3",
"PTRH2",
"BET1",
"TTC21B",
"NSD1",
"INTS9",
"TMC4",
"AP3B1",
"KAZALD1",
"TP53I3",
"TCEAL8",
"SUPT16H",
"LSM1",
"GBA1LP",
"S100A9",
"CHM",
"PRKAG3",
"DDX11L9",
"PSG8",
"IL17REL",
"PKP1",
"PAIP2B",
"PHTF2",
"SYT12",
"IRF1",
"RHOA",
"LAMA3",
"DKK3",
"SLC46A1",
"FASTKD1",
"TGFB2",
"CARD17P",
"WHAMMP2",
"NEO1",
"RAB11FIP4",
"GSTO1",
"HOXA9",
"C19orf53",
"SNAR-I",
"OTULIN",
"LIPA",
"POLRMT",
"SPX",
"SNORD36A",
"SELENOW",
"ISG20",
"CLIP4",
"WRAP73",
"TRAPPC12",
"RPL14",
"HSD17B11",
"RAB21",
"INKA2",
"SPHK1",
"FAM177A1",
"GPC2",
"RARRES1",
"IFIH1",
"GSTA2",
"PSCA",
"TMCC2",
"MRTO4",
"GNL3",
"GCLC",
"MBD3",
"MARCHF9",
"HFE",
"ARSI",
"ANK1",
"CYREN",
"TTC23",
"APOBEC3B",
"LRRD1",
"PDSS2",
"FABP4",
"LZTS2",
"SLC1A2",
"TREM1",
"CYP1B1",
"PTPN12",
"ZNF33B",
"ARID3A",
"HS6ST1",
"CSKMT",
"FOSB",
"GEMIN4",
"DARS1",
"FAAH2",
"SLC7A6OS",
"NEDD9",
"SDF2L1",
"PRAMEF15",
"LGALS3",
"EGR1",
"GPAT2",
"ANKZF1",
"TUSC2",
"CCDC71L",
"PROK1",
"H1-10",
"H4C4",
"ANGPT2",
"GNG5",
"RINT1",
"GLI2",
"CLTCL1",
"TPTE2",
"ZFAND2A",
"URGCP"
],
"Coefficient": [
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0.004800361023337465,
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-0.002283489090749561,
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-0.002204992800875464,
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-0.00190976094980963,
0.0018553116471505717,
-0.0018080172174798962,
-0.0016949194702456534,
-0.0013976080924446477,
0.0013900951203091314,
0.0013409492550299205,
-0.0013375919617989711,
0.001274077555148945,
0.0012256294029096247,
-0.0011202557237539185,
-0.00107797894500592,
-0.0009491687994025456,
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0.0009007914820680086,
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-0.0006637347794406873,
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0.0005617303231905555,
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0.0002080093072762204,
-9.983002140529335e-05,
5.0231010893109284e-05,
1.1534511688296218e-05
],
"Absolute Coefficient": [
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0.04526200018915324,
0.03576995205808279,
0.033131831284348635,
0.03035460492132835,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 95.55555555555554,
"precision": 0.0,
"recall": 0.0,
"f1": 0.0
},
"selection": {
"precision": 6.431016837666453,
"recall": 1.7857142857142854,
"f1": 2.7925430620266223,
"jaccard": 1.4172186370537956
}
}
}