GenoTEX / output /regress /Hypertension /significant_genes_condition_Prostate_Cancer.json
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{
"significant_genes": {
"Variable": [
"COPS3",
"PTRH2",
"BET1",
"TTC21B",
"NSD1",
"INTS9",
"TCEAL8",
"KAZALD1",
"TP53I3",
"TMC4",
"AP3B1",
"GBA1LP",
"S100A9",
"LSM1",
"SUPT16H",
"TGFB2",
"DDX11L9",
"PRKAG3",
"IRF1",
"PKP1",
"PHTF2",
"LAMA3",
"IL17REL",
"CHM",
"PSG8",
"SYT12",
"RAB11FIP4",
"RHOA",
"GSTO1",
"FASTKD1",
"SLC46A1",
"CLIP4",
"WHAMMP2",
"PAIP2B",
"LIPA",
"DKK3",
"SELENOW",
"NEO1",
"CARD17P",
"SNORD36A",
"TRAPPC12",
"WRAP73",
"SNAR-I",
"HFE",
"SPX",
"ISG20",
"INKA2",
"GPC2",
"RAB21",
"HOXA9",
"LZTS2",
"RARRES1",
"C19orf53",
"HSD17B11",
"APOBEC3B",
"ARSI",
"GCLC",
"LRRD1",
"ANKZF1",
"POLRMT",
"ANK1",
"PRAMEF15",
"MBD3",
"MRTO4",
"FAM177A1",
"TMCC2",
"PDSS2",
"OTULIN",
"GEMIN4",
"SPHK1",
"TTC23",
"SDF2L1",
"PSCA",
"TREM1",
"IFIH1",
"RINT1",
"FABP4",
"FOSB",
"GNG5",
"CYREN",
"DENND6A",
"ARID3A",
"RPL14",
"GLI2",
"CSKMT",
"EIF5AL1",
"CCDC71L",
"GNL3",
"ZFAND2A",
"PTPN12",
"SLC7A6OS",
"ATXN7L1",
"ZNF816",
"TPTE2",
"ATP5F1C",
"LGALS3",
"ZNF33B",
"CHIT1",
"MARCHF9",
"SLC1A2",
"H4C4",
"GPAT2",
"NEDD9",
"PNRC2",
"C8orf82",
"PROK1",
"GSTA2",
"PROCR",
"ANGPT2",
"TUSC2",
"AHSP",
"SMPD2",
"CYP1B1"
],
"Coefficient": [
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0.04297771155264687,
-0.03478870954579625,
0.0316877582799916,
0.03152329051472577,
-0.02162761885932284,
-0.020697158752052806,
0.02011773825295249,
-0.019381282014035633,
-0.019372243882049462,
0.01907403188554559,
0.016692770210511576,
0.015956091032829783,
0.015604151374715915,
0.014132328322564018,
-0.013137239058810916,
0.013115114211000103,
-0.012701736256106842,
0.011595822224028668,
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-0.011451997138450583,
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-0.010598437388515817,
0.00978438786046629,
0.009449582065468726,
0.009039063014913503,
-0.008525510686668906,
0.008223499820155241,
-0.007917944549178749,
-0.0077341478249278684,
0.007496628615758968,
0.007489661375768873,
0.00743820623548327,
0.0073313331679137885,
-0.006900304268734978,
0.006841623372843261,
-0.006464036132644453,
0.0061837754243640715,
-0.005667111332601735,
-0.005538425327567472,
-0.005222503155791923,
-0.004988968202538745,
0.004984938608416496,
-0.004851951062246905,
0.004736723391537845,
-0.004588382083158681,
0.0045300133896321116,
0.004513067377011166,
-0.004466704140684276,
-0.004459062511798753,
0.004442887353212917,
0.004434474972078002,
0.004427434741895581,
0.004334396011157265,
0.004324948797749343,
-0.004235752823978813,
0.0040745366030170375,
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-0.0036687475132147524,
0.0036606019405966,
0.003556267280110392,
-0.0035083194974683176,
0.0033276594664047848,
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0.00320646508332345,
-0.0031739091499899744,
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-0.003020296563494289,
-0.002716770506910146,
0.0025915093600347404,
0.0025853088580092324,
-0.002581305796150576,
0.0024797201009452686,
0.0024494081663023366,
-0.002411585432456176,
0.002396997549849635,
-0.002190667067765521,
0.0019228607754572398,
-0.0018386178252651796,
0.0017622574183798981,
-0.0017041232962753119,
0.0016983670732341437,
-0.0016564622051084867,
0.0016292563957321015,
-0.0015712730845986453,
0.0015630018834834898,
-0.0013969214115650001,
0.001159514095093085,
0.001152535824095723,
0.0011429245645129074,
0.0010979806101197786,
0.001004186667981985,
-0.0009965825280911175,
-0.0008308361010963084,
-0.000820311550893026,
-0.0007981768056526457,
-0.0007386559075077268,
-0.00073477671586546,
0.0006885774205044161,
0.0006677746831437003,
-0.0006332311030103183,
-0.0005997076547283038,
0.0005495264894536904,
-0.00048239624648755623,
-0.0003892171250411371,
-0.00036451266875680405,
0.00033617496128133894,
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0.00026075477006256745,
0.00016530434335919778,
-5.699891345666426e-05,
4.2527661357060345e-05
],
"Absolute Coefficient": [
0.04397557510628948,
0.04297771155264687,
0.03478870954579625,
0.0316877582799916,
0.03152329051472577,
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0.013137239058810916,
0.013115114211000103,
0.012701736256106842,
0.011595822224028668,
0.011550424556380159,
0.011451997138450583,
0.01128572231191984,
0.010956768618644686,
0.010598437388515817,
0.00978438786046629,
0.009449582065468726,
0.009039063014913503,
0.008525510686668906,
0.008223499820155241,
0.007917944549178749,
0.0077341478249278684,
0.007496628615758968,
0.007489661375768873,
0.00743820623548327,
0.0073313331679137885,
0.006900304268734978,
0.006841623372843261,
0.006464036132644453,
0.0061837754243640715,
0.005667111332601735,
0.005538425327567472,
0.005222503155791923,
0.004988968202538745,
0.004984938608416496,
0.004851951062246905,
0.004736723391537845,
0.004588382083158681,
0.0045300133896321116,
0.004513067377011166,
0.004466704140684276,
0.004459062511798753,
0.004442887353212917,
0.004434474972078002,
0.004427434741895581,
0.004334396011157265,
0.004324948797749343,
0.004235752823978813,
0.0040745366030170375,
0.003682687992863676,
0.0036687475132147524,
0.0036606019405966,
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0.0033276594664047848,
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0.00320646508332345,
0.0031739091499899744,
0.003134581974607988,
0.003020296563494289,
0.002716770506910146,
0.0025915093600347404,
0.0025853088580092324,
0.002581305796150576,
0.0024797201009452686,
0.0024494081663023366,
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0.002396997549849635,
0.002190667067765521,
0.0019228607754572398,
0.0018386178252651796,
0.0017622574183798981,
0.0017041232962753119,
0.0016983670732341437,
0.0016564622051084867,
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0.0015630018834834898,
0.0013969214115650001,
0.001159514095093085,
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0.0007386559075077268,
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0.00036451266875680405,
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5.699891345666426e-05,
4.2527661357060345e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 95.55555555555554,
"precision": 0.0,
"recall": 0.0,
"f1": 0.0
},
"selection": {
"precision": 6.36437334623772,
"recall": 1.7857142857142854,
"f1": 2.78658804174956,
"jaccard": 1.414167736909103
}
}
}