GenoTEX / output /regress /Multiple_sclerosis /significant_genes_condition_Age.json
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{
"significant_genes": {
"Variable": [
"LINC00115",
"GPR107",
"HSFY2",
"HCG4",
"NXPH2",
"H4C5",
"GSTM5",
"PPP6R2",
"S100A9",
"MAGEA4",
"IL18R1",
"RBMS2P1",
"ZNF788P",
"FBXO47",
"UROS",
"PLA1A",
"SMYD5",
"TAFA2",
"EIF1AY",
"IMPDH2",
"PRSS58",
"MIR1238",
"KAT6A",
"FECH",
"TDRG1",
"POMZP3",
"GUSBP14",
"GNB5",
"MIR1-1HG",
"TMEM59L",
"COPS5",
"ENHO",
"CFAP68",
"TRIM63",
"GTF2E2",
"MIR197",
"ZFYVE21",
"SPANXC",
"LHX4",
"MESD",
"TMEM86B",
"RAB11A",
"TC2N",
"NPNT",
"GPR137B",
"ATP6V1G1",
"VDAC1",
"RPL14",
"CACNG6",
"MAGEA2B",
"ZNF510",
"FLJ40194",
"PWRN1",
"SNORA59A",
"SHISAL2B",
"PTPN1",
"NUP188",
"SCGN",
"PCDHB8",
"SFTA1P",
"GRIP1",
"EHD1",
"SNHG28",
"FAM201A",
"OMG",
"PSMC1",
"MIR507",
"FOLR3",
"NUDT16",
"SCHIP1",
"PRAMEF14",
"GSR",
"MRPL37",
"LRRC23",
"SPEG",
"RBBP8",
"TMEM19",
"TM4SF18",
"MORC2-AS1",
"NYAP2",
"CYB5R3",
"STPG4",
"CNN3",
"MYL12B",
"PCDHB11",
"RAVER2",
"RPS19",
"PPP2CB",
"PIK3C2A",
"PRKY",
"PCCA",
"CDY1",
"CCNQP1",
"ABHD16A",
"ZNF527",
"KRT19",
"RAB6C",
"FAM178B",
"MIR146A",
"DCAF5",
"EVL",
"HLA-DRB1",
"MIR409",
"GAR1",
"GLYATL3",
"CHRM5",
"SRSF4",
"GMCL2",
"ANKIB1",
"RFWD3",
"RPRM",
"ZBTB14",
"MIR495",
"CYGB",
"MIR1261",
"RHPN1",
"FLYWCH1",
"NRBP2",
"SYT14",
"ZC3H10",
"MILR1",
"FTH1P8"
],
"Coefficient": [
0.10312841835398158,
-0.06656275440212875,
-0.058744125481115024,
0.056973208144755594,
0.049835406912739445,
-0.0394449479402812,
0.03906914343988307,
-0.03788885458436974,
0.03633608538923854,
0.03601556682723374,
0.03585664389103556,
0.02723918249710405,
0.025776888639141973,
-0.02558717679272467,
-0.024485952705594803,
0.023200509443926768,
-0.022893508098596103,
-0.022498353845603027,
-0.0224612911644578,
0.022413474588059056,
0.022393848718621382,
-0.02162263841545275,
-0.021585257139755124,
0.018604271733261124,
-0.01753551154461374,
0.017269745093174357,
0.015458056287049863,
0.015369524963813958,
-0.015235304799225977,
-0.015129821270711958,
0.014832287868269622,
-0.01479115393142262,
-0.013791179435515997,
0.012713765177310533,
0.012103602944272313,
0.011837492108341072,
-0.011128516475190949,
0.011055582154716173,
-0.010587752002612671,
-0.010342513823009273,
-0.010171844728435117,
0.009931829209186241,
0.009743376709352037,
0.009493801188785494,
-0.009262052996512686,
-0.008899800028267377,
-0.00887108006776896,
-0.008834354482137275,
-0.008088988071139804,
0.008040749502622718,
-0.007966740013487756,
0.007773041707226449,
0.007699103779132995,
0.007671665733272739,
-0.00753416389623729,
-0.0073951656464396505,
0.007212986119159119,
0.0072041432532344895,
0.006897509226075068,
-0.006767282720597708,
0.006280790112670183,
0.006210411199792073,
-0.006021061371170439,
0.005967967082472668,
0.005525918272978083,
0.005445229053182831,
0.005353647642646503,
0.005285341698967009,
0.005276785471911428,
0.005229610311660386,
-0.00510233806077019,
-0.004775002764578655,
-0.004702027925880965,
-0.004382301276559933,
0.004375557821710416,
-0.0041212586129993345,
0.0040793396472357,
0.004070549499890825,
-0.0039160513711487795,
0.00383381757792921,
-0.003728377954921406,
-0.0036157082528756176,
0.0033989450136816444,
0.0032368940609193734,
0.0031052224540352386,
-0.003049829690559476,
-0.0029827546242562975,
-0.002946325616346037,
-0.0029165048779833504,
-0.0023839416611060736,
0.002002071880838475,
-0.0019743307642791355,
0.0018655885005927338,
0.0017493457376329526,
0.0016951283568296578,
0.0016547310110505869,
0.0015460257500252718,
-0.0012033455746649632,
-0.0011663661443197283,
-0.0010717600235779037,
0.000996254130109848,
0.0009924194087660922,
0.0009517560620571806,
-0.0008945777422745873,
0.0008763732591628568,
-0.0007895223511872667,
-0.0005471131646825474,
0.00046302831241915477,
0.00044769861012409026,
-0.0004141216153081503,
0.0004136920687305145,
0.00041318536767712144,
-0.0003689157780644737,
-0.00030756117752489195,
0.0002320701348286285,
-0.00019103355461277442,
-0.00017011042563243973,
0.00016861899233443602,
-0.00013235294079957217,
9.201584984558798e-05,
6.142178147960173e-05,
2.58616884712697e-06
],
"Absolute Coefficient": [
0.10312841835398158,
0.06656275440212875,
0.058744125481115024,
0.056973208144755594,
0.049835406912739445,
0.0394449479402812,
0.03906914343988307,
0.03788885458436974,
0.03633608538923854,
0.03601556682723374,
0.03585664389103556,
0.02723918249710405,
0.025776888639141973,
0.02558717679272467,
0.024485952705594803,
0.023200509443926768,
0.022893508098596103,
0.022498353845603027,
0.0224612911644578,
0.022413474588059056,
0.022393848718621382,
0.02162263841545275,
0.021585257139755124,
0.018604271733261124,
0.01753551154461374,
0.017269745093174357,
0.015458056287049863,
0.015369524963813958,
0.015235304799225977,
0.015129821270711958,
0.014832287868269622,
0.01479115393142262,
0.013791179435515997,
0.012713765177310533,
0.012103602944272313,
0.011837492108341072,
0.011128516475190949,
0.011055582154716173,
0.010587752002612671,
0.010342513823009273,
0.010171844728435117,
0.009931829209186241,
0.009743376709352037,
0.009493801188785494,
0.009262052996512686,
0.008899800028267377,
0.00887108006776896,
0.008834354482137275,
0.008088988071139804,
0.008040749502622718,
0.007966740013487756,
0.007773041707226449,
0.007699103779132995,
0.007671665733272739,
0.00753416389623729,
0.0073951656464396505,
0.007212986119159119,
0.0072041432532344895,
0.006897509226075068,
0.006767282720597708,
0.006280790112670183,
0.006210411199792073,
0.006021061371170439,
0.005967967082472668,
0.005525918272978083,
0.005445229053182831,
0.005353647642646503,
0.005285341698967009,
0.005276785471911428,
0.005229610311660386,
0.00510233806077019,
0.004775002764578655,
0.004702027925880965,
0.004382301276559933,
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0.0041212586129993345,
0.0040793396472357,
0.004070549499890825,
0.0039160513711487795,
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0.003049829690559476,
0.0029827546242562975,
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0.0023839416611060736,
0.002002071880838475,
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0.0018655885005927338,
0.0017493457376329526,
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0.0016547310110505869,
0.0015460257500252718,
0.0012033455746649632,
0.0011663661443197283,
0.0010717600235779037,
0.000996254130109848,
0.0009924194087660922,
0.0009517560620571806,
0.0008945777422745873,
0.0008763732591628568,
0.0007895223511872667,
0.0005471131646825474,
0.00046302831241915477,
0.00044769861012409026,
0.0004141216153081503,
0.0004136920687305145,
0.00041318536767712144,
0.0003689157780644737,
0.00030756117752489195,
0.0002320701348286285,
0.00019103355461277442,
0.00017011042563243973,
0.00016861899233443602,
0.00013235294079957217,
9.201584984558798e-05,
6.142178147960173e-05,
2.58616884712697e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 92.38095238095238,
"precision": 91.8997668997669,
"recall": 95.6184012066365,
"f1": 93.56976356976357
},
"selection": {
"precision": 6.19666274914088,
"recall": 0.7028753993610224,
"f1": 1.2624046877971564,
"jaccard": 0.635305608164733
}
}
}