GenoTEX / output /regress /Obstructive_sleep_apnea /significant_genes_condition_Epilepsy.json
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{
"significant_genes": {
"Variable": [
"COL4A1",
"OTC",
"HTN3",
"ZIC2",
"ESM1",
"CIDEC",
"PRSS58",
"ALG1L1P",
"CSRNP1",
"C14orf180",
"ADH4",
"HOXD11",
"ZNF114",
"AIM2",
"PLA2G2E",
"CFAP46",
"FAM74A3",
"CHST2",
"HOXC9",
"PRB4",
"IL17F",
"SLC35C1",
"THRSP",
"IL11",
"NUCB2",
"NRG2",
"ODF4",
"SHOX2",
"HOXA10",
"KRT35",
"GRAP",
"BMF",
"IL22",
"FOXD2",
"GRIN2D",
"C4orf50",
"LINC01599",
"PLAC1",
"DIPK1A",
"E2F7",
"CXCL13",
"C18orf54",
"FAM167B",
"GPRIN1",
"ABCG1",
"CDH24",
"MMP9",
"MAP4K2",
"TIMP4",
"CNR2",
"DNMT3B",
"CCL11",
"PARP12",
"SEC14L3",
"GARIN4",
"TMEM132A",
"POTEE",
"LINC00314",
"HOXC8",
"C17orf67",
"EAF2",
"SLC36A1",
"SNX9",
"FRMPD2B",
"RMI2",
"GPR101",
"CIMIP2B",
"FERD3L",
"HTR3B",
"ABTB1",
"RHAG",
"ADAM12",
"HOXC6",
"CELSR3",
"EME1",
"BPIFA2",
"SHROOM3",
"PCDH17",
"SPINK8",
"SRPX",
"FAM43B",
"KRT32",
"SLC17A3",
"KRTAP13-1",
"SLC28A1",
"H2AC11",
"MT1A",
"FCRL2",
"GTSF1L",
"SULT1C3",
"HSD17B13",
"CLIC4",
"PDE6A",
"SLC6A17",
"ZNF707",
"HSD17B6",
"ZNF415",
"PRSS37",
"KCNQ1OT1",
"LEPROTL1",
"CRIPTO",
"LPIN1",
"DPF1",
"LIPI",
"THSD7B",
"CDY1B",
"CABS1",
"TTR",
"HRCT1",
"TSPAN10",
"OR3A3",
"KCTD19"
],
"Coefficient": [
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0.016060255098048187,
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0.013687231983886161,
-0.01300187823459799,
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-0.012440716586906658,
0.011391412008554456,
0.011067380515528009,
0.01081165883423758,
-0.010048403742390325,
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0.007620232268768723,
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0.005999916997275619,
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0.005829618889683484,
0.005573028171122797,
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0.0054326797239984854,
0.005368223196572783,
0.00536086143421164,
0.004690542321348023,
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0.004595388699586842,
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0.0043200011677229375,
0.004072147160134637,
0.004014011833146255,
0.004006610333913581,
0.003930590121818902,
0.0037931252862081787,
0.0037399511821594815,
0.003732961973663606,
-0.0034841868278208017,
0.0033166749187825187,
0.0032833577035395497,
0.003184052084516403,
0.003174458252142467,
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0.002158917708485123,
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-0.0016259210439697406,
0.0015411355958107418,
0.0015370881177134733,
0.001480379243225269,
0.0014356646592139579,
-0.001383498776469862,
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0.0013386823669586595,
-0.0013057521139709315,
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-0.00120312256121614,
-0.0011447941204180453,
0.0011172288610877502,
-0.0010449720476694378,
-0.0008820903455306466,
0.0008713026522151972,
-0.0008371100020086792,
0.00075211750520132,
0.0007406147519832495,
-0.0007257203725224084,
-0.0006752892318104462,
0.0006543519118780738,
-0.0006114678569300404,
-0.0005998582946784311,
0.0005831834352119162,
0.0005796449887906773,
-0.0005402408383024732,
0.0005400656302076704,
0.0005260065793152684,
0.0005045876349736496,
0.00047215871207183084,
-0.0003762155991559309,
0.00025142355255158817,
-0.00025132608778169994,
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0.00020751501306411584,
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-7.868902136466864e-05,
-5.204911139988111e-05,
4.8749523573302766e-05,
2.0845992114385735e-06,
5.599918414851654e-07
],
"Absolute Coefficient": [
0.021370713455742988,
0.021222779945933013,
0.018784008866663197,
0.016681788988787936,
0.016060255098048187,
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0.01426449496001884,
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0.011067380515528009,
0.01081165883423758,
0.010048403742390325,
0.010047206365722473,
0.009707368988083963,
0.009287932422170013,
0.008524463638142608,
0.00838574945351744,
0.008172078631013427,
0.008103500479945194,
0.007924090138073632,
0.007620232268768723,
0.007531236710404459,
0.007397506616248273,
0.00656062996498089,
0.0063834542128826405,
0.005999916997275619,
0.0059944413550411585,
0.005829618889683484,
0.005573028171122797,
0.005507738199475727,
0.0054326797239984854,
0.005368223196572783,
0.00536086143421164,
0.004690542321348023,
0.0046788996122171895,
0.004595388699586842,
0.004471090599549693,
0.0043200011677229375,
0.004072147160134637,
0.004014011833146255,
0.004006610333913581,
0.003930590121818902,
0.0037931252862081787,
0.0037399511821594815,
0.003732961973663606,
0.0034841868278208017,
0.0033166749187825187,
0.0032833577035395497,
0.003184052084516403,
0.003174458252142467,
0.003080838501079226,
0.0028820469290752417,
0.0027433814604696967,
0.0025555848727818278,
0.002416683413781239,
0.00240991139417278,
0.0023754885492507766,
0.002184437750968547,
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0.0020969580497509272,
0.002034336247913676,
0.002008943341058961,
0.0019524342035957623,
0.0017275316813981964,
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0.0016259210439697406,
0.0015411355958107418,
0.0015370881177134733,
0.001480379243225269,
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0.001383498776469862,
0.0013453501212822242,
0.0013386823669586595,
0.0013057521139709315,
0.0012141579929811524,
0.00120312256121614,
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0.0008820903455306466,
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0.0008371100020086792,
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0.0005402408383024732,
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0.00025132608778169994,
0.00021609638776434118,
0.00020751501306411584,
0.00014641975527444933,
7.868902136466864e-05,
5.204911139988111e-05,
4.8749523573302766e-05,
2.0845992114385735e-06,
5.599918414851654e-07
]
},
"cv_performance": {
"prediction": {
"accuracy": 99.46902654867259,
"precision": 99.6133009527368,
"recall": 99.80952380952381,
"f1": 99.71001700267568
},
"selection": {
"precision": 1.1374022127308676,
"recall": 2.3076923076923075,
"f1": 1.522735140217434,
"jaccard": 0.7679559319020631
}
}
}