GenoTEX / output /regress /Obstructive_sleep_apnea /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"ESM1",
"ADH4",
"PRSS58",
"ZIC2",
"HOXC9",
"ALG1L1P",
"CIDEC",
"TTTY8",
"COL4A1",
"IL22",
"HOXD11",
"NUCB2",
"OTC",
"CSRNP1",
"PLA2G2E",
"BMF",
"C14orf180",
"LACRT",
"SHCBP1",
"MMP9",
"AIM2",
"CXCL13",
"CENPA",
"EPB41L4B",
"CHST2",
"GPR101",
"HTN3",
"POTEE",
"CLSTN3",
"DIPK1A",
"SLC35C1",
"LINC00314",
"KRT35",
"PRB4",
"FASTKD1",
"ZNF114",
"RIIAD1",
"CSN1S1",
"SLC6A1",
"ARRB2",
"FOXD2",
"SHOX2",
"TNFRSF11B",
"FADS1",
"MYOC",
"FRMPD2B",
"PLAC1",
"FAM74A3",
"CFAP46",
"CIMIP2B",
"DLEU1",
"MC5R",
"ITGAD",
"SCIN",
"GRIN2D",
"NRG2",
"SLC6A17",
"ABCG1",
"TIMP4",
"CDH24",
"GRAP",
"HTR3B",
"SLC5A9",
"SLC12A3",
"SHF",
"LRRC8D",
"KLHDC8A",
"TSPAN10",
"ODF4",
"CELSR3",
"SNX9",
"C4orf50",
"F2RL2",
"WIF1",
"LEPROTL1",
"SNX10",
"SLC36A1",
"CEP55",
"PARP12",
"RLN3",
"FAM43B",
"KRTAP1-3",
"KRTAP13-1",
"AMELY",
"DNMT3B",
"F2RL3",
"KRT32",
"MIXL1",
"TICAM1",
"MGLL",
"TRPC4",
"JDP2",
"ZP2",
"NEU1",
"LINC01599",
"CXCR5",
"ADTRP",
"SH2D2A",
"IL17F",
"GARIN4",
"ZNF584",
"CLIC4",
"GTSF1L",
"MRPS31",
"FST",
"SULT1C3",
"CAPN11",
"FOXD4L4",
"HOXA10",
"FRMPD4",
"ASTN2",
"MT1A",
"SPDYE4",
"RGS7",
"MAP4K2",
"TSBP1",
"DIO1",
"CCNB2",
"OR4D6",
"TMEM132A",
"SCARA5",
"CATSPERD",
"C17orf67",
"ATP5F1A",
"GFI1",
"FCRL2",
"CABS1"
],
"Coefficient": [
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0.015118617463166029,
0.013504008848394417,
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-0.010665648724242895,
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0.009841244597605893,
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0.007445074104487754,
0.007349806220328781,
0.0069845398569872074,
0.006878918629215764,
-0.006738119979274993,
-0.006685391100110684,
-0.006444903188549022,
0.006138415196282106,
0.006012505020444408,
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-0.005727615880496387,
-0.005621075520402084,
-0.005556432853721225,
-0.005135000204357782,
0.005131399914564976,
-0.0051080104273654335,
0.004868807466207837,
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0.004695441175115735,
0.0044663052426500175,
0.004341829681310575,
0.004275512748144291,
0.004239072124618454,
-0.0041471366457125165,
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0.0039059970717154253,
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0.003398404242318463,
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0.003357855329113898,
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0.0030216694938993358,
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0.0029375791199759277,
0.0029024656170125083,
-0.002855906208470511,
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0.002649623355164089,
-0.0026354539562309493,
0.0024266201190773344,
-0.002356994561082847,
0.002314677105529767,
-0.0023055839218688993,
0.0022150705419609986,
-0.0021535745037765223,
0.002073617202937846,
0.0020730712012817787,
-0.0020702199600126665,
0.0020600161323878876,
0.0020522230986825007,
0.0019735467344129225,
0.0019350463644949363,
0.0018705966588079834,
0.001827183552722394,
-0.0017411452537461833,
-0.001718983850380229,
-0.0015995242145128937,
-0.0015965626429424173,
0.0015446231415896274,
0.001493420194844164,
-0.0014927090320440025,
0.0014450889917872523,
-0.0014320427658084968,
-0.001390747439380438,
0.0013687272737344016,
-0.0013572104372498283,
-0.001329293627257653,
0.0012619726340993664,
0.0011632034096624362,
0.0011313549274489115,
0.0011011421397222761,
0.0010233250287732696,
-0.0009080633497788427,
-0.0008757152588231653,
-0.0008059889615592226,
0.0007597650367420187,
0.0007165232968709406,
-0.0006492767813677495,
0.0006267442252294162,
-0.00058413373398936,
0.0005679736737104927,
0.0005483458063979902,
0.0005460319505530362,
-0.000500919197818091,
0.00047785549037569807,
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0.0003737887793729413,
0.0003581026954040954,
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0.00018785499825833019,
-0.00017983708343867407,
-0.00016051468565281553,
0.00015888811170791103,
-0.00014142262347546108,
6.242610360796849e-05,
5.02707675791154e-05,
-2.5560801249697192e-05
],
"Absolute Coefficient": [
0.025340372576136822,
0.020923569835002723,
0.017236502879423028,
0.015118617463166029,
0.013504008848394417,
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0.011768295456308007,
0.010957631905405107,
0.010834732716918498,
0.010665648724242895,
0.01054302204767687,
0.010467396944918404,
0.009852856480021202,
0.009841244597605893,
0.009691099003714898,
0.008791332792645054,
0.008603515409483625,
0.0083042319749738,
0.008157130304675506,
0.007445074104487754,
0.007349806220328781,
0.0069845398569872074,
0.006878918629215764,
0.006738119979274993,
0.006685391100110684,
0.006444903188549022,
0.006138415196282106,
0.006012505020444408,
0.005755034287462408,
0.005727615880496387,
0.005621075520402084,
0.005556432853721225,
0.005135000204357782,
0.005131399914564976,
0.0051080104273654335,
0.004868807466207837,
0.004729007371755159,
0.004695441175115735,
0.0044663052426500175,
0.004341829681310575,
0.004275512748144291,
0.004239072124618454,
0.0041471366457125165,
0.003982377160566093,
0.0039059970717154253,
0.0038053412581933845,
0.0037930988303472193,
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0.0036469998991703,
0.003623469781294585,
0.003398404242318463,
0.0033949023104888703,
0.003357855329113898,
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0.000500919197818091,
0.00047785549037569807,
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0.0003737887793729413,
0.0003581026954040954,
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0.00018785499825833019,
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0.00014142262347546108,
6.242610360796849e-05,
5.02707675791154e-05,
2.5560801249697192e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 99.11504424778761,
"precision": 99.41919631523592,
"recall": 99.61721611721612,
"f1": 99.51771362965393
},
"selection": {
"precision": 1.230726789550319,
"recall": 2.6923076923076925,
"f1": 1.688922948262667,
"jaccard": 0.8540815971542752
}
}
}