GenoTEX / output /regress /Obstructive_sleep_apnea /significant_genes_condition_Osteoarthritis.json
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{
"significant_genes": {
"Variable": [
"COL4A1",
"HTN3",
"OTC",
"ZIC2",
"PRSS58",
"ALG1L1P",
"ADH4",
"ESM1",
"CIDEC",
"C14orf180",
"CHST2",
"HOXC9",
"GRIN2D",
"PLA2G2E",
"FAM74A3",
"IL11",
"SLC35C1",
"THRSP",
"SHOX2",
"HOXD11",
"CSRNP1",
"CXCL13",
"IL22",
"CCL11",
"HOXA10",
"CFAP46",
"CBLB",
"NRG2",
"PRB4",
"DIPK1A",
"PRND",
"TIMP4",
"PLAC1",
"AIM2",
"CMTM1",
"LEPROTL1",
"KRT35",
"RHAG",
"TMEM132A",
"BMF",
"KRT32",
"CELSR3",
"IL17F",
"MAP4K2",
"FADS1",
"ABCG1",
"FAM43B",
"ZNF114",
"DEPDC1B",
"SPINK8",
"PRSS37",
"CNTFR",
"CRIPTO",
"LINC01599",
"AFDN-DT",
"RPL19P12",
"MGLL",
"HSD17B13",
"GARIN4",
"FRMPD2B",
"OR3A3",
"SEC14L3",
"FAAP24",
"TICAM1",
"ZNF707",
"SHROOM3",
"LAMP5",
"TIMMDC1",
"C4orf50",
"ODF4",
"SERPINA9",
"CABS1",
"HRCT1",
"C18orf54",
"KCNQ1OT1",
"CNNM2",
"MMP9",
"ADAM12",
"FCRL2",
"CIMIP2B",
"SLC36A1",
"GPC2",
"SLCO1C1",
"RPP38-DT",
"CNR2",
"LINC00314",
"SLC28A1",
"FAM167B",
"PLK1",
"HOXC6",
"FAM111A",
"GPRIN1",
"HSD17B6",
"SEL1L3",
"CELA2B",
"DIO1",
"ANKRD20A4P",
"MC5R",
"DLX1",
"SRPX",
"RCC2",
"LINC00174",
"KRTAP13-1",
"SI",
"ATP6V1C1",
"NOL4",
"LAIR2",
"ISLR2",
"E2F7",
"CCDC14",
"CDC25C",
"FCHSD2",
"CDY1B",
"TSBP1",
"SLC6A17",
"HOXC8",
"SULT1C3",
"CIP2A",
"SNX9",
"FERD3L",
"LMAN2",
"CDADC1",
"LRRC8D",
"SYT6",
"AK3",
"PXDNL",
"RMI2"
],
"Coefficient": [
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0.01801832111258566,
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0.010589773532856669,
-0.009913237617161522,
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0.00945026881077861,
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0.00797171858682891,
0.007218907262834314,
-0.006531631818705268,
0.006435265157316734,
-0.006351375528087948,
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0.005815163558296435,
0.005534828265471219,
-0.00540338809783096,
0.0049826036964102285,
0.004889321209185646,
0.00484301273159167,
0.004508130237846682,
-0.004368653709599738,
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0.003909802554411817,
-0.0038060310650712297,
0.003767566797237492,
-0.003755666905197993,
0.003690621144120572,
0.0036782124630320373,
0.003477014450589859,
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0.003047700463662783,
0.0030399598959106023,
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0.002732386333235346,
-0.0027013319864679416,
0.0025245104115906446,
-0.0023842910295119833,
0.002373789800105173,
-0.0023662981086462584,
0.0023188622173074148,
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0.0021396441601506657,
-0.002110052963073273,
0.0021070812413912453,
-0.00200361463903622,
-0.0019425007582161958,
0.0019104670614104565,
0.0018220056953351695,
0.0018080693130612918,
0.0017255588083526902,
0.0016196605356113606,
0.001604979858485509,
-0.0014118787950458602,
0.001403616636106098,
0.0013986778152263706,
0.00135657452536805,
0.0013461435212698488,
0.0013156678350338472,
-0.0013143724555920756,
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0.0012920579890681098,
0.001291324339580025,
0.0012865447445957285,
0.0012656380189391327,
0.001231850673219655,
0.0012034583501103972,
0.0011889942132070484,
0.0011037852934656668,
-0.0010238921739905511,
-0.0010135048823364564,
-0.0010032107191613787,
0.0009910934682378046,
-0.0008741101796427951,
0.0008481354522693654,
0.0008212781857613591,
-0.0007690571779928572,
0.0007538144895649136,
0.0006797318818645559,
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0.0005783292449776078,
0.0005661521143562873,
0.0005632283017434467,
0.0005119420455654174,
0.0004093379078940952,
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0.0003334334451673529,
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0.00029034583067033196,
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-0.00021710364571611834,
-0.00021052316685744895,
0.00019417579406750003,
0.00017935397039271954,
-0.00013548191427326616,
8.077415402339276e-05,
1.5146944031432179e-05
],
"Absolute Coefficient": [
0.02048468192643436,
0.020294689342486856,
0.019105058831682828,
0.01801832111258566,
0.017378276393182887,
0.014049238675174984,
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0.011346946725483944,
0.010589773532856669,
0.009913237617161522,
0.009776565150123892,
0.00945026881077861,
0.009422965586893858,
0.009350253080679544,
0.00870070202448286,
0.008644953824654314,
0.008599667578529901,
0.008457277178853272,
0.008344965791563564,
0.00797171858682891,
0.007218907262834314,
0.006531631818705268,
0.006435265157316734,
0.006351375528087948,
0.00626469338665056,
0.005815163558296435,
0.005534828265471219,
0.00540338809783096,
0.0049826036964102285,
0.004889321209185646,
0.00484301273159167,
0.004508130237846682,
0.004368653709599738,
0.004234645299196744,
0.0041635221482031175,
0.003909802554411817,
0.0038060310650712297,
0.003767566797237492,
0.003755666905197993,
0.003690621144120572,
0.0036782124630320373,
0.003477014450589859,
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0.0033814096295716627,
0.003317724247365363,
0.0032672313588050445,
0.003249172224178964,
0.003240079503756103,
0.003047700463662783,
0.0030399598959106023,
0.0029448932656727426,
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0.0028270086769786634,
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0.0005661521143562873,
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0.0005119420455654174,
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0.000375987684307062,
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0.00019417579406750003,
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8.077415402339276e-05,
1.5146944031432179e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 99.29203539823008,
"precision": 99.42102781706743,
"recall": 99.80952380952381,
"f1": 99.61432754205731
},
"selection": {
"precision": 1.0245781892640975,
"recall": 2.3076923076923075,
"f1": 1.4185583289275074,
"jaccard": 0.7149782767668945
}
}
}