GenoTEX / output /regress /Ovarian_Cancer /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"NOP56",
"RANGRF",
"PRDX4",
"DNAH17",
"MTCL2",
"MAP2K6",
"RFPL2",
"MED15",
"OXTR",
"C19orf12",
"TRIL",
"SNRPN",
"RNASE12",
"SNORD12C",
"ABCB4",
"SLC30A5",
"TMEM106C",
"KRT38",
"HSPBAP1",
"CHST13",
"LIN37",
"LRFN3",
"CLEC2D",
"S1PR4",
"MIR630",
"RPF2",
"NRN1",
"CNPY2",
"OR9Q2",
"SUPT5H"
],
"Coefficient": [
-0.04544510592466145,
-0.03831620913194877,
-0.0358633913999439,
0.03254483105343085,
0.03148366274647847,
-0.02635642878661871,
-0.024036905829929477,
0.023834749577307957,
0.02350491758381993,
0.022132403561696254,
0.019941871563853047,
-0.01763866464886226,
-0.016596935693454336,
-0.01571176733628795,
0.014021337903182362,
-0.011332417955382436,
-0.009708773842056964,
0.007298484858158804,
0.0072748914785321335,
-0.006777151756348051,
0.0065900288126123675,
0.005988949347345659,
-0.005810829081508623,
0.004608252876764543,
-0.0029581774238429783,
-0.002943797853278402,
0.0019654404092923354,
-0.0019004162670162787,
-0.0014286076872988874,
8.442464064014279e-06
],
"Absolute Coefficient": [
0.04544510592466145,
0.03831620913194877,
0.0358633913999439,
0.03254483105343085,
0.03148366274647847,
0.02635642878661871,
0.024036905829929477,
0.023834749577307957,
0.02350491758381993,
0.022132403561696254,
0.019941871563853047,
0.01763866464886226,
0.016596935693454336,
0.01571176733628795,
0.014021337903182362,
0.011332417955382436,
0.009708773842056964,
0.007298484858158804,
0.0072748914785321335,
0.006777151756348051,
0.0065900288126123675,
0.005988949347345659,
0.005810829081508623,
0.004608252876764543,
0.0029581774238429783,
0.002943797853278402,
0.0019654404092923354,
0.0019004162670162787,
0.0014286076872988874,
8.442464064014279e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 53.68421052631578,
"precision": 55.57142857142857,
"recall": 62.98124098124098,
"f1": 57.6694701179827
},
"selection": {
"precision": 5.998500524816315,
"recall": 0.22471910112359547,
"f1": 0.43293508473340836,
"jaccard": 0.21696017995896133
}
}
}