GenoTEX / output /regress /Pancreatic_Cancer /significant_genes_condition_Age.json
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{
"significant_genes": {
"Variable": [
"ABL1",
"ATF2",
"ATG7",
"CSF2",
"AMBP",
"BAGE",
"IRF7",
"HLA-DRB4",
"ADORA2A",
"ATF1",
"IL19",
"AICDA",
"BCL6",
"DDX43",
"IL15",
"IFITM2",
"NT5E",
"CCL14",
"ENTPD1",
"ISG20",
"ARG1",
"HLA-A",
"CXCL6",
"STAT2",
"CD163",
"IL9",
"C3",
"APOE",
"HLA-DQB1",
"CD1A",
"PNMA1",
"IL22RA2",
"ATG5",
"CCL11",
"CCR4",
"IL18R1",
"MCAM",
"PLAU",
"LILRA4",
"IL32",
"FCER1G",
"APP",
"IFNAR1",
"GAGE1",
"ALCAM",
"MBL2",
"ENG",
"IL22",
"FCGR2B",
"ARG2",
"OAS3",
"STAT4",
"CKLF",
"PRKCE",
"CD24",
"CTSH",
"CD59",
"CD37",
"ANXA1",
"CD47",
"NEFL",
"IFIT1",
"IRAK4",
"CCL3L1",
"JAM3",
"GTF3C1",
"HLA-DPB1",
"LRP1",
"IRAK1",
"CD33",
"TNFSF18",
"CCR1",
"CREBBP",
"SAA1",
"FLT3LG",
"SPANXB1",
"BLK",
"BCL2",
"IRF3",
"CFI",
"IL4R",
"IL1B",
"HAVCR2",
"ATM",
"FOXJ1",
"ITGA5",
"DPP4",
"IL6R",
"KLRC2",
"HLA-DQA1"
],
"Coefficient": [
-0.13241164857564786,
0.08924765551667015,
0.07822556782952296,
0.06497138972904376,
0.06353415869840076,
0.06328519542238951,
-0.05616972601277223,
0.05594904445837235,
-0.05368084407931611,
0.05055623121491635,
-0.045944597070069766,
-0.04319788910326931,
-0.03901385793917976,
-0.0358780069214489,
-0.03518286898993383,
0.03426605511769789,
-0.032143225739991114,
0.029429094049924057,
-0.028758632994495936,
-0.02795787957560786,
0.026971851000695476,
-0.026084964436760845,
-0.02517350935489615,
-0.02411661766445481,
-0.023817135230826045,
0.023601831244145784,
0.02345278511334835,
-0.023285795838100105,
-0.02241675363573734,
-0.02185536888946576,
-0.02172061460444931,
0.020582103349657797,
0.020157034205795822,
0.019293402042738855,
0.01924438504803509,
0.018649650447418637,
-0.018180692965867322,
0.01809976621649974,
-0.016869094906573394,
-0.01648567101414852,
0.016428470679263372,
-0.015529678330131403,
-0.01423310260556914,
0.012719571291043855,
0.012347568039481257,
-0.010880263008906032,
0.010232726381768835,
0.00930050549183827,
-0.007877247419782189,
-0.007484741567774185,
-0.007386035227025121,
0.007289613001647292,
0.00699975496578845,
-0.006994335252169351,
0.0061265026517041245,
0.005807329467221408,
-0.005758786125523692,
-0.005626760498167453,
0.005351326833901876,
0.003804712068891028,
-0.003762767035101116,
-0.003672823321581857,
-0.0036608122710828986,
0.003486468552858984,
-0.002880689367381446,
-0.002658296708374973,
0.0025224154195801186,
-0.002168477205409644,
-0.001826394613303324,
0.0015138780706367492,
0.0013286455722823411,
0.0013107175150976948,
-0.0012821808998908534,
-0.0010059739570749018,
0.0009473902148885412,
-0.0008389571053262437,
-0.0006839491033768809,
-0.0006530343268445854,
-0.0004110468215920534,
-0.0003499630058605045,
-0.0003444901923133678,
0.00033288430410052973,
0.00026469969328108995,
-9.638588129448038e-05,
7.834415745739732e-05,
-5.938628910085976e-05,
-1.4123502136463677e-05,
-1.2546421817949188e-05,
-9.7691538598483e-06,
-6.445808552205839e-06
],
"Absolute Coefficient": [
0.13241164857564786,
0.08924765551667015,
0.07822556782952296,
0.06497138972904376,
0.06353415869840076,
0.06328519542238951,
0.05616972601277223,
0.05594904445837235,
0.05368084407931611,
0.05055623121491635,
0.045944597070069766,
0.04319788910326931,
0.03901385793917976,
0.0358780069214489,
0.03518286898993383,
0.03426605511769789,
0.032143225739991114,
0.029429094049924057,
0.028758632994495936,
0.02795787957560786,
0.026971851000695476,
0.026084964436760845,
0.02517350935489615,
0.02411661766445481,
0.023817135230826045,
0.023601831244145784,
0.02345278511334835,
0.023285795838100105,
0.02241675363573734,
0.02185536888946576,
0.02172061460444931,
0.020582103349657797,
0.020157034205795822,
0.019293402042738855,
0.01924438504803509,
0.018649650447418637,
0.018180692965867322,
0.01809976621649974,
0.016869094906573394,
0.01648567101414852,
0.016428470679263372,
0.015529678330131403,
0.01423310260556914,
0.012719571291043855,
0.012347568039481257,
0.010880263008906032,
0.010232726381768835,
0.00930050549183827,
0.007877247419782189,
0.007484741567774185,
0.007386035227025121,
0.007289613001647292,
0.00699975496578845,
0.006994335252169351,
0.0061265026517041245,
0.005807329467221408,
0.005758786125523692,
0.005626760498167453,
0.005351326833901876,
0.003804712068891028,
0.003762767035101116,
0.003672823321581857,
0.0036608122710828986,
0.003486468552858984,
0.002880689367381446,
0.002658296708374973,
0.0025224154195801186,
0.002168477205409644,
0.001826394613303324,
0.0015138780706367492,
0.0013286455722823411,
0.0013107175150976948,
0.0012821808998908534,
0.0010059739570749018,
0.0009473902148885412,
0.0008389571053262437,
0.0006839491033768809,
0.0006530343268445854,
0.0004110468215920534,
0.0003499630058605045,
0.0003444901923133678,
0.00033288430410052973,
0.00026469969328108995,
9.638588129448038e-05,
7.834415745739732e-05,
5.938628910085976e-05,
1.4123502136463677e-05,
1.2546421817949188e-05,
9.7691538598483e-06,
6.445808552205839e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 93.33333333333334,
"precision": 90.0,
"recall": 95.0,
"f1": 90.47619047619048
},
"selection": {
"precision": 0.8672790510097663,
"recall": 16.0,
"f1": 1.6453643312995303,
"jaccard": 0.8355263157894737
}
}
}