GenoTEX / output /regress /Parkinsons_Disease /significant_genes_condition_Migraine.json
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{
"significant_genes": {
"Variable": [
"DHX32",
"CENPC",
"NYAP1",
"SUCLG1",
"MAP3K7CL",
"ZSWIM4",
"LAMC3",
"GLRX",
"INPP5B",
"NDUFAF7",
"MAP3K10",
"ACTL10",
"ELAVL1",
"FN3KRP",
"OR52E6",
"EIF1",
"ISL2",
"PDRG1",
"ARHGAP31",
"TMEM41A",
"MOGS",
"FAM117A",
"MYBBP1A",
"CLPX",
"CCDC186",
"EMC1",
"SAPCD2",
"SCGB3A1",
"PPP2R3A",
"CERS5",
"FER1L6-AS1",
"PI4K2A",
"GFRA2",
"CRACR2B",
"C20orf204",
"MED16",
"MAN2A1",
"SELENOO",
"DHX34",
"TMEM121B",
"TNFRSF11A",
"NQO2",
"SYMPK",
"RNF141",
"BPNT1",
"ZCCHC17",
"ROGDI",
"QTRT2",
"SLFN12",
"CYBB",
"TUSC2",
"SLFN13",
"ACAD8",
"UTP14A",
"CYSTM1",
"JOSD1",
"PEBP4",
"LRRC18",
"RAB2B",
"HIBCH",
"E2F2",
"PTGDS",
"CES3",
"PROP1",
"PPIA",
"NUTF2",
"GOLT1B",
"TLK2",
"FMC1-LUC7L2",
"PLK3",
"NOP10",
"M1AP",
"COLGALT2",
"BAMBI",
"USP47",
"GABBR1",
"TMEM164",
"NUDT2",
"SMARCAL1",
"ATOSB",
"ATP1A3",
"ACOT4",
"TYMS",
"ENTPD4",
"GPR68",
"ZNF701",
"LTBR",
"ZNF615",
"LGALSL",
"CTRL",
"NDUFV3",
"UQCC2",
"ISY1",
"SLC5A8",
"EIF1AY",
"COX20",
"TOLLIP",
"GP5",
"SPAG7",
"MAGEB3",
"ARID1A",
"GALNS",
"TMED4",
"POLR2D",
"DHX35",
"OLIG1",
"LRRC58",
"EGLN1",
"LMNTD1",
"MYBPH",
"RASA3",
"ENTPD6",
"HLA-C",
"NAPSB",
"H2BC8",
"MIR22HG",
"PLK2",
"MAPRE3",
"FAM118A",
"TBCEL",
"COX14",
"ERP27",
"SLC25A13",
"SMG7",
"PARD6A",
"NDUFA7",
"FMO4",
"CARM1",
"C2orf42",
"SEC16B",
"PLCH2",
"FNTB",
"CROCC",
"SPTA1",
"PID1",
"DUSP14",
"CCDC107",
"HECTD3",
"SGPL1",
"ATG2A",
"RTL6",
"ZNRD2",
"EPHB4",
"HIP1",
"LDLR",
"EEF1AKMT3",
"CD164",
"NFYB",
"ETFDH",
"AQP10",
"LGALS2",
"NDN",
"SNHG5",
"AARS2",
"VAV2",
"BIN3",
"RHCG",
"PUDP",
"CALHM1",
"SLC25A43",
"ANKS4B",
"MAP3K6",
"CFD",
"CC2D1B",
"ATF1",
"FUT7",
"P2RX1",
"SS18L1",
"LSS",
"RNASE3",
"SELPLG",
"TUBB4B",
"ACTR5",
"CTU1"
],
"Coefficient": [
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-0.03231305083101686,
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-0.03134333540499585,
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-0.005999226492195991,
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0.003797054903922036,
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0.003238303423840035,
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],
"Absolute Coefficient": [
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0.07510272141119409,
0.07405631299056306,
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0.06661171856417836,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 64.28571428571429,
"precision": 64.76190476190476,
"recall": 98.94736842105263,
"f1": 77.50614216701173
},
"selection": {
"precision": 5.956172435087776,
"recall": 0.9761904761904763,
"f1": 1.6772229693234166,
"jaccard": 0.8459005867189896
}
}
}