GenoTEX / output /regress /Parkinsons_Disease /significant_genes_condition_Multiple_sclerosis.json
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{
"significant_genes": {
"Variable": [
"NYAP1",
"CENPC",
"MAP3K7CL",
"DHX32",
"ELAVL1",
"ZSWIM4",
"INPP5B",
"TMEM41A",
"GLRX",
"SUCLG1",
"FN3KRP",
"LAMC3",
"GFRA2",
"EIF1",
"ARHGAP31",
"SCGB3A1",
"MYBBP1A",
"CRACR2B",
"MAP3K10",
"PPP2R3A",
"PDRG1",
"CERS5",
"ACTL10",
"ZCCHC17",
"RAB2B",
"FMC1-LUC7L2",
"CYSTM1",
"ISL2",
"NDUFAF7",
"BPNT1",
"SMARCAL1",
"RNF141",
"FAM117A",
"SELENOO",
"SAPCD2",
"MED16",
"TUSC2",
"LGALSL",
"ZNF701",
"FER1L6-AS1",
"TMEM164",
"H2BC8",
"CLPX",
"SYMPK",
"ACOT4",
"CCDC186",
"EMC1",
"CD164",
"ZNF615",
"TLK2",
"ENTPD4",
"NUDT2",
"MOGS",
"CYBB",
"FAM118A",
"NOP10",
"SPAG7",
"MIR22HG",
"TNFRSF11A",
"BIN3",
"ACAD8",
"C20orf204",
"MYBPH",
"HLA-C",
"ENTPD6",
"CES3",
"PI4K2A",
"OLIG1",
"GOLT1B",
"POLR2D",
"ATOSB",
"LTBR",
"ROGDI",
"DEFB121",
"UQCC2",
"SLFN13",
"ISY1",
"UTP14A",
"RASL10B",
"MAGEB3",
"PLK3",
"TMEM121B",
"PLB1",
"OR52E6",
"ZNRD2",
"SLFN12",
"LRRC18",
"E2F2",
"CTRL",
"ATG2A",
"DUSP14",
"PROP1",
"ANKS4B",
"CFD",
"DHX34",
"NUTF2",
"C2orf42",
"COQ8B",
"BAMBI",
"MTMR10",
"EIF1AY",
"GABBR1",
"LIMS2",
"QTRT2",
"LRP4",
"NQO2",
"EPHB4",
"AQP10",
"CHURC1",
"SGPL1",
"SLC39A6",
"PID1",
"ZNF213",
"SLC5A8",
"TYMS",
"MYOF",
"TMED4",
"USP47",
"MAK",
"NAPSB",
"JOSD1",
"GBE1",
"PRKAR2A",
"UQCR10",
"CCDC107",
"SRD5A1",
"ABHD1",
"CRX",
"CARM1",
"MAN2A1",
"HIBCH",
"GPR68",
"NDUFV3",
"SMG7",
"RNF138P1",
"HIP1",
"EEF1AKMT3",
"RBBP6",
"COLGALT2",
"PCDHA5",
"LMNTD1",
"DPYSL4",
"TUBB4B",
"PEBP4",
"PHF20",
"RASA3",
"ATP1A3",
"PPIA",
"TBCEL",
"MPHOSPH10",
"DHX35",
"MRM2",
"CCNF",
"NDN",
"KDM3A",
"PTGDS",
"AARS2",
"PARD6A",
"SEMA4F",
"M1AP",
"MAPRE3",
"CTU1",
"CAST",
"RNASET2"
],
"Coefficient": [
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],
"Absolute Coefficient": [
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0.06437858918460232,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 65.0,
"precision": 65.0,
"recall": 100.0,
"f1": 78.02418101992569
},
"selection": {
"precision": 5.683839792115653,
"recall": 0.9285714285714286,
"f1": 1.5960962895048645,
"jaccard": 0.8047521204292721
}
}
}