Hugging Face's logo

Datasets:
Liu-Hy
/
GenoTEX

Tasks:
Text Generation
Table Question Answering
Tabular Regression
Languages:
English
Size:
100B<n<1T
ArXiv:
Tags:
ai4science
agent
llm
genomics
biology
License:
Dataset card Files Community
GenoTEX / output /regress /Polycystic_Ovary_Syndrome /significant_genes_condition_Atherosclerosis.json
Liu-Hy's picture
Liu-Hy
Add files using upload-large-folder tool
0ea1621 verified
raw
history blame contribute delete
15.5 kB
 {
"significant_genes": {
"Variable": [
"AADAT",
"A1BG",
"AA06",
"ABCB1",
"AASDH",
"ABCG1",
"AAGAB",
"AADACL2",
"AARS2",
"ABHD17C",
"ABCC11",
"ACOT8",
"AAK1",
"ABCA5",
"ABCC5",
"ABCC3",
"ABHD14B",
"ABCF1",
"ACKR3",
"ABCC6P1",
"A2MP1",
"ACER3",
"A1BG-AS1",
"ABHD12B",
"ACOT4",
"ADAM11",
"ABHD15",
"ABHD2",
"ABCA17P",
"ABCG8",
"ABHD1",
"ABRAXAS1",
"ABHD17B",
"ADAMTS9",
"A1CF",
"ACO1",
"ABCC4",
"ADPGK",
"ACSF3",
"AASDHPPT",
"ACOD1",
"ABHD12",
"ABTB3",
"ACAA2",
"ACTR3",
"ACSM2A",
"ADD1",
"ACOT12",
"ACSS3",
"ABHD10",
"ACBD6",
"ACP3",
"ADAM1A",
"AHSA2P",
"ACTA2",
"AFG2A",
"ACTG1",
"ACAD9",
"ADH4",
"ACAD10",
"ACBD5",
"ADAD2",
"ADAP2",
"ACAP3",
"AFF3",
"ABL2",
"ADAMTS14",
"ACTG1P4",
"ABLIM2",
"ABHD13",
"ABTB2",
"ADGRD1",
"ACTR2",
"AGAP3",
"ACSL6",
"ACAD11",
"ACKR1",
"ABI2",
"ABHD16B",
"ABCB8",
"ADAMTS10",
"ABCA9",
"ABCC13",
"ACMSD",
"AKAP13",
"AFDN",
"ACTL10",
"ADCY4",
"ACE",
"ADCY1",
"ADCY5",
"ACOT6",
"ADAMTSL4",
"ADAMTSL5",
"ADAM33",
"ACY3",
"ANKS4B",
"CFAP184",
"ADI1",
"ACSM2B",
"AGMAT",
"ADGRG6",
"AVIL",
"ADARB1",
"AGAP2",
"ADAMTS8",
"ACP6",
"ACADSB",
"ADD2",
"ADCY10P1",
"ADAMTS15",
"CFAP107",
"ABI3",
"ACOXL",
"ACVR2B",
"AFAP1-AS1",
"ADAM22",
"ACTL9",
"ADSS2",
"ACP4",
"AKT1S1",
"ADNP",
"ADGRG5",
"ATAD2B",
"ALS2CL",
"ACTRT2",
"AHNAK",
"ACSL5",
"ACTN1",
"ASB14",
"AOPEP",
"ADAT2",
"ANKRD35",
"ADAM23",
"ADM5",
"ARX",
"HSD17B14",
"ANO5",
"AKAP10",
"ADAM12",
"BPNT1",
"BANK1",
"ADTRP",
"C6orf147",
"GEMIN7",
"ATP6AP1L",
"CLDN11",
"ANGPTL6",
"AGO1",
"ARHGAP28",
"ANKEF1",
"AGFG1",
"CRYZL1",
"ACTRT3",
"ARHGEF11",
"ARL8A",
"ADAT3",
"AKR1C6P",
"ABHD18",
"FSBP",
"ARPIN",
"BARD1",
"ANO7",
"BACE1",
"HLA-DPB1"
],
"Coefficient": [
0.17547050720265178,
0.1431431340587447,
0.12104953065310414,
-0.1079200407846132,
-0.0954925651728222,
-0.07850949674739932,
-0.07747809382899583,
-0.07617954345078194,
-0.07308545202098424,
0.06109832459978701,
-0.0514619374926223,
0.05053167024286235,
0.050458623871513404,
0.047909728128031695,
0.04553323305580867,
-0.037972109050624044,
-0.03458486278727088,
-0.034276755288195085,
-0.031109259409443188,
0.029591047346569532,
-0.028041390666853967,
-0.027815516369277038,
0.027581843808134672,
0.027294538103209566,
-0.027239431270478405,
-0.025113605009913206,
-0.024557783927820355,
0.023359628223665305,
-0.021477928040455514,
-0.021420988989782633,
0.020794217885478933,
0.02077067008257997,
-0.020722871833710677,
0.020160416767846807,
0.019674754559310934,
-0.019242388380802097,
0.018588726588768364,
0.01634703205846991,
-0.015544840231314607,
0.014978475819906531,
0.014932678353691447,
0.014559143434512596,
0.014211670544710862,
-0.013866177541074706,
-0.013390855754917354,
0.013126362047068345,
-0.012915949506639456,
-0.012473853755785207,
-0.011679762522643057,
-0.011652546400910312,
0.011444908064464063,
0.010708812918704975,
-0.010320549985753758,
0.009791434234011688,
-0.009734388398631706,
0.009652192558762472,
-0.00957638849704168,
-0.008405908157539348,
-0.008066917488697475,
-0.007426532085603094,
0.007216207091032152,
-0.0071965897256191175,
0.007172887702927677,
-0.007026811910498797,
-0.006907723224461458,
-0.00680673384958536,
0.006784811475230568,
0.006632622142743179,
0.0064343409554229935,
-0.006285408980948062,
0.00626844651996209,
-0.006218682424103277,
0.006142339365908906,
0.006051029961160054,
0.005539196563608551,
0.005497523305509096,
0.005256620120497233,
0.005185338106052929,
0.00517574228222332,
0.004937561437959224,
0.0046960257686691894,
0.004499688255336792,
0.004320415883418328,
0.004302568041472847,
0.004192338077180056,
-0.004148517779062472,
0.004138312189792435,
0.00406083122854255,
0.0040505087359727,
0.004008190964893318,
-0.003955595780246342,
-0.003942296755377906,
-0.003912404341373673,
-0.003795719472872276,
-0.003615103688317002,
-0.0034236147303180076,
0.0034124311437153418,
-0.0031497854278700276,
-0.003025680427511555,
-0.002836533119726123,
0.0027735841488702954,
-0.0024852616796965706,
-0.002433569536372954,
-0.0023191556033649837,
0.0022669515902706367,
-0.0019964695679336726,
0.0019528706010487336,
0.0019132147244590957,
0.0018281062853496754,
-0.0017681152945511714,
0.0017459081742381233,
0.0016819763280671372,
0.0016774439486082215,
-0.001623942996854826,
0.0015545422100220494,
0.0014071839160829627,
-0.0014014903797333637,
-0.0013318396755137248,
0.0013069956103428833,
-0.0013056995749517971,
-0.0012669324068956067,
-0.0012460984613412262,
-0.001166820993371814,
-0.0011045527192555342,
0.0010711459431242164,
0.0009866665637197395,
0.0009515102792271468,
0.0008660751644373047,
0.0007679863681912135,
0.000675624831545386,
-0.0006696217078216759,
-0.0006557146652005634,
0.0006511324021470751,
0.0006328664758895496,
-0.0006314664969216513,
-0.000596673504726517,
-0.0005234370044560362,
-0.0004181643573771342,
-0.00041650291857952035,
0.00040615527060361233,
-0.0003341368881149024,
-0.00032565101257993594,
0.00032200773053876937,
0.00029028303509717274,
0.000271764537688581,
0.00026484704058961773,
-0.0002471546830507602,
0.00023019757349974397,
-0.0001336657454414593,
-9.214444984479624e-05,
9.107353248761323e-05,
-6.737008737490156e-05,
6.715704067030284e-05,
-6.520876122068741e-05,
6.0841912995827766e-05,
-5.639193822862877e-05,
-4.87961911808517e-05,
-4.087716983390249e-05,
-3.906866072601866e-05,
-1.646597019891939e-05,
1.0273309447237816e-05,
-6.5139451953469855e-06,
5.738804484408418e-06,
-2.7701635528076024e-06,
-1.4117477877851222e-06
],
"Absolute Coefficient": [
0.17547050720265178,
0.1431431340587447,
0.12104953065310414,
0.1079200407846132,
0.0954925651728222,
0.07850949674739932,
0.07747809382899583,
0.07617954345078194,
0.07308545202098424,
0.06109832459978701,
0.0514619374926223,
0.05053167024286235,
0.050458623871513404,
0.047909728128031695,
0.04553323305580867,
0.037972109050624044,
0.03458486278727088,
0.034276755288195085,
0.031109259409443188,
0.029591047346569532,
0.028041390666853967,
0.027815516369277038,
0.027581843808134672,
0.027294538103209566,
0.027239431270478405,
0.025113605009913206,
0.024557783927820355,
0.023359628223665305,
0.021477928040455514,
0.021420988989782633,
0.020794217885478933,
0.02077067008257997,
0.020722871833710677,
0.020160416767846807,
0.019674754559310934,
0.019242388380802097,
0.018588726588768364,
0.01634703205846991,
0.015544840231314607,
0.014978475819906531,
0.014932678353691447,
0.014559143434512596,
0.014211670544710862,
0.013866177541074706,
0.013390855754917354,
0.013126362047068345,
0.012915949506639456,
0.012473853755785207,
0.011679762522643057,
0.011652546400910312,
0.011444908064464063,
0.010708812918704975,
0.010320549985753758,
0.009791434234011688,
0.009734388398631706,
0.009652192558762472,
0.00957638849704168,
0.008405908157539348,
0.008066917488697475,
0.007426532085603094,
0.007216207091032152,
0.0071965897256191175,
0.007172887702927677,
0.007026811910498797,
0.006907723224461458,
0.00680673384958536,
0.006784811475230568,
0.006632622142743179,
0.0064343409554229935,
0.006285408980948062,
0.00626844651996209,
0.006218682424103277,
0.006142339365908906,
0.006051029961160054,
0.005539196563608551,
0.005497523305509096,
0.005256620120497233,
0.005185338106052929,
0.00517574228222332,
0.004937561437959224,
0.0046960257686691894,
0.004499688255336792,
0.004320415883418328,
0.004302568041472847,
0.004192338077180056,
0.004148517779062472,
0.004138312189792435,
0.00406083122854255,
0.0040505087359727,
0.004008190964893318,
0.003955595780246342,
0.003942296755377906,
0.003912404341373673,
0.003795719472872276,
0.003615103688317002,
0.0034236147303180076,
0.0034124311437153418,
0.0031497854278700276,
0.003025680427511555,
0.002836533119726123,
0.0027735841488702954,
0.0024852616796965706,
0.002433569536372954,
0.0023191556033649837,
0.0022669515902706367,
0.0019964695679336726,
0.0019528706010487336,
0.0019132147244590957,
0.0018281062853496754,
0.0017681152945511714,
0.0017459081742381233,
0.0016819763280671372,
0.0016774439486082215,
0.001623942996854826,
0.0015545422100220494,
0.0014071839160829627,
0.0014014903797333637,
0.0013318396755137248,
0.0013069956103428833,
0.0013056995749517971,
0.0012669324068956067,
0.0012460984613412262,
0.001166820993371814,
0.0011045527192555342,
0.0010711459431242164,
0.0009866665637197395,
0.0009515102792271468,
0.0008660751644373047,
0.0007679863681912135,
0.000675624831545386,
0.0006696217078216759,
0.0006557146652005634,
0.0006511324021470751,
0.0006328664758895496,
0.0006314664969216513,
0.000596673504726517,
0.0005234370044560362,
0.0004181643573771342,
0.00041650291857952035,
0.00040615527060361233,
0.0003341368881149024,
0.00032565101257993594,
0.00032200773053876937,
0.00029028303509717274,
0.000271764537688581,
0.00026484704058961773,
0.0002471546830507602,
0.00023019757349974397,
0.0001336657454414593,
9.214444984479624e-05,
9.107353248761323e-05,
6.737008737490156e-05,
6.715704067030284e-05,
6.520876122068741e-05,
6.0841912995827766e-05,
5.639193822862877e-05,
4.87961911808517e-05,
4.087716983390249e-05,
3.906866072601866e-05,
1.646597019891939e-05,
1.0273309447237816e-05,
6.5139451953469855e-06,
5.738804484408418e-06,
2.7701635528076024e-06,
1.4117477877851222e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 86.66666666666666,
"precision": 53.33333333333333,
"recall": 60.0,
"f1": 56.0
},
"selection": {
"precision": 0.8295206278204418,
"recall": 2.857142857142857,
"f1": 1.2838131367105343,
"jaccard": 0.6466049092519894
}
}
}