GenoTEX / output /regress /Polycystic_Ovary_Syndrome /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"AADAT",
"A1CF",
"ADAMTS14",
"AAK1",
"AKAP13",
"C1QTNF7",
"A1BG",
"ABCC3",
"ABHD16A",
"ADCY1",
"ABCB8",
"ACO1",
"AP1G1",
"ADAM33",
"ABI2",
"AA06",
"TMEM127",
"ABTB1",
"ABHD17C",
"MCHR1",
"ACTA2",
"ACTB",
"ANKRD9",
"DBH-AS1",
"ABCA17P",
"ADD1",
"AXIN2",
"CCDC32",
"ABCA9",
"ACSF3",
"ACCS",
"ARL17A",
"ADGRD1",
"APBA1",
"ACTG2",
"ADAMTS1",
"ADAMTS16",
"IL17RD",
"NFATC2",
"ACAD11",
"ARL14EP",
"AKIP1",
"CBLN3",
"ACP3",
"CEP152",
"BAG2",
"PGBD1",
"VPS33A",
"AOPEP",
"AP4S1",
"ANXA1",
"ANAPC1",
"CARD8",
"SUSD4",
"C4orf46",
"ARHGAP42",
"BMP2K",
"ATG10",
"FBXO5",
"DAB2IP",
"ARHGEF19",
"ABCB10",
"AQR",
"TACC1",
"MAP3K13",
"ACADSB",
"ARL17B"
],
"Coefficient": [
0.1348287470773958,
0.06760545982299336,
0.05775332663318519,
0.050856854385345325,
0.04186649297213836,
-0.03416894273854673,
0.033736234930640735,
-0.030076876826522696,
0.029641749023238413,
0.028630738179826254,
0.02548053825987278,
-0.02423467642524648,
0.02169654071558321,
-0.021186345711129213,
-0.020172626288427305,
0.01815896942285486,
0.01188769672698635,
0.011658560616566704,
0.011332180220937963,
0.00912227366107766,
-0.00905578482477128,
0.008973996359921611,
-0.008580365709846246,
0.008567772991641735,
-0.008518337908585676,
0.008495690422659085,
-0.00765756395474291,
0.007568965361637197,
-0.007460081432812841,
0.00729544513015307,
0.00682262034474536,
-0.006405089787159123,
-0.006286959485803763,
0.004782386919647814,
-0.004543962179327576,
0.00404449270784173,
0.00353741379951021,
-0.003517321104049614,
-0.0020435514152427076,
0.0019630900144791616,
-0.0019550424242282148,
0.0016120814757416629,
0.0015571977023294196,
-0.0014576690703271714,
-0.0010323455890189227,
-0.0009399842912103516,
-0.0009071396749507982,
0.0008776329094533397,
-0.0008302872583277168,
0.0007414857748722704,
0.0006059165307447079,
-0.000600354759822929,
-0.0005916225005592564,
0.0005076876163253752,
0.000447210125392523,
-0.000360745663896908,
0.00034488694564288353,
0.00027053972286681917,
0.00022031120157891675,
0.0001453078689850365,
0.0001284496361503645,
-0.00011574787845973409,
-8.927795193769232e-05,
-7.999389459632773e-05,
6.302747723797001e-06,
-5.636237072474853e-06,
-6.746146851020917e-19
],
"Absolute Coefficient": [
0.1348287470773958,
0.06760545982299336,
0.05775332663318519,
0.050856854385345325,
0.04186649297213836,
0.03416894273854673,
0.033736234930640735,
0.030076876826522696,
0.029641749023238413,
0.028630738179826254,
0.02548053825987278,
0.02423467642524648,
0.02169654071558321,
0.021186345711129213,
0.020172626288427305,
0.01815896942285486,
0.01188769672698635,
0.011658560616566704,
0.011332180220937963,
0.00912227366107766,
0.00905578482477128,
0.008973996359921611,
0.008580365709846246,
0.008567772991641735,
0.008518337908585676,
0.008495690422659085,
0.00765756395474291,
0.007568965361637197,
0.007460081432812841,
0.00729544513015307,
0.00682262034474536,
0.006405089787159123,
0.006286959485803763,
0.004782386919647814,
0.004543962179327576,
0.00404449270784173,
0.00353741379951021,
0.003517321104049614,
0.0020435514152427076,
0.0019630900144791616,
0.0019550424242282148,
0.0016120814757416629,
0.0015571977023294196,
0.0014576690703271714,
0.0010323455890189227,
0.0009399842912103516,
0.0009071396749507982,
0.0008776329094533397,
0.0008302872583277168,
0.0007414857748722704,
0.0006059165307447079,
0.000600354759822929,
0.0005916225005592564,
0.0005076876163253752,
0.000447210125392523,
0.000360745663896908,
0.00034488694564288353,
0.00027053972286681917,
0.00022031120157891675,
0.0001453078689850365,
0.0001284496361503645,
0.00011574787845973409,
8.927795193769232e-05,
7.999389459632773e-05,
6.302747723797001e-06,
5.636237072474853e-06,
6.746146851020917e-19
]
},
"cv_performance": {
"prediction": {
"accuracy": 80.0,
"precision": 80.0,
"recall": 60.0,
"f1": 66.66666666666666
},
"selection": {
"precision": 0.5808080808080808,
"recall": 0.9523809523809523,
"f1": 0.7212475633528264,
"jaccard": 0.36390703829294513
}
}
}