GenoTEX / output /regress /Polycystic_Ovary_Syndrome /significant_genes_condition_Schizophrenia.json
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{
"significant_genes": {
"Variable": [
"A1CF",
"AASDH",
"A1BG",
"AA06",
"AAK1",
"ABCB1",
"ADPGK",
"ABHD17B",
"ABCB10",
"ADAMTS14",
"AADAT",
"ABCA9",
"AOPEP",
"ACAD11",
"ABCA17P",
"ABHD14B",
"ABHD17C",
"ADAM33",
"AIFM3",
"ARHGAP1",
"ABCC5",
"CENPO",
"DCUN1D5",
"ACTG2",
"AKNA",
"ABCB8",
"MEAK7",
"AKAP13",
"ADAT2",
"ANKFN1",
"ABHD16A",
"ADCY1",
"CRTAP",
"ARL17A",
"ABI3BP",
"ABTB1",
"ANXA1",
"AFF3",
"C1QTNF7",
"ABCC3",
"AK4",
"FAHD2CP",
"ADH4",
"RRP1",
"ASB3",
"ADAMTS12",
"AK8",
"ANKRD53",
"TRIM61",
"AGPAT4-IT1",
"AIF1L",
"ADORA3",
"ACP3",
"CCDC71L",
"AFAP1-AS1",
"FCRLB",
"VPS33A",
"ADNP",
"MEAF6",
"ALKBH1",
"ANK2",
"ZNF696",
"WNT2B",
"SNAPIN",
"HNRNPR",
"ALG9",
"AP1G1",
"CCDC134",
"GLE1",
"ADAMTSL1",
"PRR19",
"ANKRD35",
"AGO2",
"SSC5D",
"HOXB13",
"ATG10",
"ANO7",
"ASB2",
"ADAMTS16",
"NEXN",
"ADCY5",
"AXIN2",
"CCDC149",
"C16orf89",
"SERTM1",
"CA13",
"TTLL7",
"ARHGEF19"
],
"Coefficient": [
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-0.024381375440989308,
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0.019235515928520488,
-0.016809969310034693,
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0.015685190492051356,
0.014523648256679868,
0.01372460300582792,
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-0.011543694272640253,
0.011243017531661494,
0.010008893854767779,
0.009154288376370957,
-0.008534769501515382,
-0.008143210556624095,
0.00807436954095793,
0.007029919165006,
-0.0062600866266305545,
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-0.005740231424337725,
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-0.003928131275365786,
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0.002165325457960929,
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0.0013395958557739997,
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-0.0011099003698346978,
-0.0009736098532726485,
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0.0006299946554829264,
-0.00045830127708324837,
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0.0003859130755134091,
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-0.00025552017013399697,
-0.00025020381482465794,
0.00022775261873080093,
0.00019572136178469462,
0.00018712943707910982,
-0.00018046303497647079,
0.00017767689725441905,
-0.00015952529598486993,
-0.00013219670986416014,
-0.00011176387893233332,
9.341342930988687e-05,
9.302421997466774e-05,
8.052400861533527e-05,
-6.365108729460423e-05,
6.275175517827974e-05,
-4.958979908657493e-05,
-4.207746324906373e-05,
-4.074078885348073e-05,
-3.994726369595586e-05,
-1.4344396749010439e-05,
-2.968167429395895e-06,
9.943580739430151e-07,
-3.429746568477669e-07,
9.613805888452221e-08
],
"Absolute Coefficient": [
0.1334145578556679,
0.1054925177316938,
0.06675186665941533,
0.06348227255260169,
0.06088422937896116,
0.0563288285651464,
0.04701273508863328,
0.04604085774913767,
0.04471176191324506,
0.03866304729726318,
0.03360403962627679,
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0.02508212006696673,
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0.024381375440989308,
0.023775387566469457,
0.019235515928520488,
0.016809969310034693,
0.0157145746958443,
0.015685190492051356,
0.014523648256679868,
0.01372460300582792,
0.012986949717272999,
0.011819929377756888,
0.011543694272640253,
0.011243017531661494,
0.010008893854767779,
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0.008534769501515382,
0.008143210556624095,
0.00807436954095793,
0.007029919165006,
0.0062600866266305545,
0.006097031007111761,
0.005740231424337725,
0.005454854534436446,
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0.00480515125590324,
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0.0040555293826774665,
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0.003928131275365786,
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0.0024580627685921773,
0.002165325457960929,
0.0017067255325047422,
0.0013395958557739997,
0.0011099980714068531,
0.0011099003698346978,
0.0009736098532726485,
0.0007909923780310469,
0.0007832067784571909,
0.0007288114479814222,
0.0006835057309079784,
0.0006299946554829264,
0.00045830127708324837,
0.00043234106798759324,
0.0003859130755134091,
0.0003387217152263504,
0.00031336211071640547,
0.0003000035244486153,
0.00025552017013399697,
0.00025020381482465794,
0.00022775261873080093,
0.00019572136178469462,
0.00018712943707910982,
0.00018046303497647079,
0.00017767689725441905,
0.00015952529598486993,
0.00013219670986416014,
0.00011176387893233332,
9.341342930988687e-05,
9.302421997466774e-05,
8.052400861533527e-05,
6.365108729460423e-05,
6.275175517827974e-05,
4.958979908657493e-05,
4.207746324906373e-05,
4.074078885348073e-05,
3.994726369595586e-05,
1.4344396749010439e-05,
2.968167429395895e-06,
9.943580739430151e-07,
3.429746568477669e-07,
9.613805888452221e-08
]
},
"cv_performance": {
"prediction": {
"accuracy": 93.33333333333333,
"precision": 80.0,
"recall": 70.0,
"f1": 73.33333333333333
},
"selection": {
"precision": 0.9611960042252641,
"recall": 1.9047619047619047,
"f1": 1.2751820728291317,
"jaccard": 0.6427339669814611
}
}
}