GenoTEX / output /regress /Psoriasis /significant_genes_condition_Hypertension.json
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{
"significant_genes": {
"Variable": [
"AGR3",
"ZNF385C",
"NRTN",
"DDX50",
"DIRAS2",
"FRMD4A",
"TAC1",
"ITGA7",
"AOPEP",
"PLXNA2",
"NPHS1",
"FCER2",
"ACTL9",
"ASPHD2",
"HTRA4",
"GRM6",
"FAM98A",
"PRKCB",
"KLHL13",
"C11orf16",
"ODAPH",
"IL17RB",
"ABCC5",
"KCNN3",
"LMO2",
"ZC3H4",
"NPFF",
"CST9L",
"LIM2",
"PHAF1",
"INSM1",
"MCTP1",
"KPTN",
"TBX4",
"POLR2E",
"ZC3HC1",
"ST6GAL2",
"EMILIN1",
"SLC13A5",
"SLC44A3",
"OSBPL6",
"ERVH48-1",
"KRT13",
"RASGEF1C",
"ATP5PB",
"KCNA4",
"TMEM174",
"BCL2L13",
"FOXN3-AS2",
"VCF2",
"TPTE",
"HORMAD2",
"CDKL3",
"ESRG",
"SH3YL1",
"LINC02877",
"LGI1",
"RPL13AP17",
"KLHL36",
"PCDH20",
"LHFPL4",
"SEPTIN3",
"EBF4",
"MMEL1",
"BFSP2",
"CDK13",
"CXXC1P1",
"SPINDOC",
"BRPF1",
"KCNIP4",
"WNT8B",
"CCDC62",
"HADH",
"TRPM6",
"CCDC27",
"YY2",
"ELMO1",
"PCYT1A",
"EPHB3",
"TREH",
"DLG5",
"ZNF570",
"OSCAR",
"TFR2",
"PMP2",
"HYDIN",
"CECR9",
"COL3A1",
"SAMD10",
"PPCDC",
"LRP12",
"STRC",
"GDF1",
"HEY1",
"NDRG4",
"TENM4",
"CCDC163",
"VRK3",
"RIMS4",
"NUP160",
"SLC15A2",
"KCNU1",
"ABRA",
"IQUB",
"WFDC2",
"KLHDC8A",
"C1orf226",
"TRAF3",
"FAM219B",
"ATOH7",
"SOHLH1",
"MS4A15",
"IFNL2",
"AMHR2",
"CACNB4",
"MPIG6B",
"PANK4",
"LINC02873",
"RNF144B",
"SLC12A4",
"ZFP57",
"POU5F1P4",
"GLIS2",
"RFPL1",
"GATD1-DT",
"TMEM52",
"ST6GALNAC5",
"SCFD2",
"LILRA6",
"OR3A2",
"GZMM",
"LDHD",
"TTTY15",
"BRAF",
"SHROOM4",
"SMCR8",
"LRRC36",
"KRT84",
"PERM1",
"ZNF438",
"DLEU7"
],
"Coefficient": [
-0.0719868277491411,
-0.050155274324620996,
-0.04463718190630248,
0.03704104435927687,
-0.03575832263247847,
-0.03511302852429726,
-0.033251384913503754,
-0.030528035479096376,
0.028386101004991778,
-0.02675854616800069,
0.02579797214567854,
-0.02362003208127721,
0.023282673704494928,
-0.022907359069625304,
0.022073407897022054,
0.021514708339537454,
0.02049141185926968,
-0.02033211145165935,
0.01964652799049718,
-0.019040880216757664,
0.01855755864258539,
-0.01741001153340928,
0.016954403778461767,
0.01625012359610747,
0.016210238389551188,
0.015635578568651515,
0.01541680979977469,
0.014975648932764743,
0.014848013807233471,
0.014468489892800777,
-0.014413891409541194,
0.014328714748163204,
0.014122667825933107,
0.014095665218773819,
-0.013784818899094133,
-0.013694030335199094,
-0.013684110620094747,
0.013527261193710314,
-0.013292527773052227,
-0.01242905111139612,
-0.011866937154041347,
-0.01173912190259494,
0.01156392308931903,
-0.011474472745789218,
-0.011468466754775315,
0.011438205784856726,
-0.011291639896159274,
-0.011244061831908578,
-0.010812646339563617,
-0.010726016384152236,
-0.010557885910552418,
0.010176924938083637,
0.010056124803598562,
-0.00986339245354922,
-0.009310845272190718,
0.009241017416060596,
-0.009030112299915188,
-0.008863171480587977,
-0.008576082934277009,
-0.008517095159746899,
0.008503942054500408,
0.00816180961130714,
-0.0077701099868396845,
-0.007654299162732933,
-0.0076129029730965855,
0.0075047412733034195,
0.007388012982827158,
0.007310780628064416,
0.007234181563090543,
0.007077525440428172,
-0.006995406380474268,
0.0068843116862758276,
-0.0068119786287130345,
-0.006792666731345565,
-0.006707588427477898,
-0.006607093573466933,
0.006531574450764469,
-0.006327118409267211,
-0.006251817494117165,
-0.006189889473392448,
-0.00598482911678476,
0.005932173415444158,
0.0055311001670398175,
-0.005413840187246967,
-0.005389000441301466,
-0.004991870580161855,
0.004903742641388705,
0.004852505638503399,
-0.004798830893183771,
-0.004606135090693275,
0.0045313250084245554,
0.004491057001447897,
0.00414400402973625,
0.00404711205176195,
0.004004704975857148,
-0.003869935074176887,
0.0038654977528375244,
-0.0036615939796134493,
-0.0036339145954126435,
0.003433828537109971,
0.003308787142282129,
0.003251850608916604,
-0.0030638460735708125,
-0.003018540860353942,
-0.002945973178757226,
-0.002830170961686194,
-0.002678909713452892,
0.002652379985347317,
-0.0026486042042353514,
0.002617300797745101,
-0.0026007777445142396,
0.002568989077629331,
-0.002521358068833895,
-0.0024262590345323714,
0.002246322328675912,
-0.002067008173609392,
0.00191714343437535,
-0.001909676287428288,
-0.0018264759526277863,
-0.0017103411830600454,
-0.001667820221603573,
-0.0016365048063791486,
0.0015318319493638362,
0.0014304161764276293,
-0.001397764564480667,
-0.001365367175649301,
-0.001348517629189627,
-0.0012895326512576822,
-0.001119307955725516,
-0.0010973374395815663,
-0.000925072695707213,
-0.0007163827265655905,
-0.0005033090781330773,
0.000418159013953468,
0.00032402693651260135,
-0.00028213255636648396,
-0.00023032496074242337,
-0.00018973455560798445,
-0.0001649314039727157,
-8.74808793901799e-05,
5.655428862688998e-05
],
"Absolute Coefficient": [
0.0719868277491411,
0.050155274324620996,
0.04463718190630248,
0.03704104435927687,
0.03575832263247847,
0.03511302852429726,
0.033251384913503754,
0.030528035479096376,
0.028386101004991778,
0.02675854616800069,
0.02579797214567854,
0.02362003208127721,
0.023282673704494928,
0.022907359069625304,
0.022073407897022054,
0.021514708339537454,
0.02049141185926968,
0.02033211145165935,
0.01964652799049718,
0.019040880216757664,
0.01855755864258539,
0.01741001153340928,
0.016954403778461767,
0.01625012359610747,
0.016210238389551188,
0.015635578568651515,
0.01541680979977469,
0.014975648932764743,
0.014848013807233471,
0.014468489892800777,
0.014413891409541194,
0.014328714748163204,
0.014122667825933107,
0.014095665218773819,
0.013784818899094133,
0.013694030335199094,
0.013684110620094747,
0.013527261193710314,
0.013292527773052227,
0.01242905111139612,
0.011866937154041347,
0.01173912190259494,
0.01156392308931903,
0.011474472745789218,
0.011468466754775315,
0.011438205784856726,
0.011291639896159274,
0.011244061831908578,
0.010812646339563617,
0.010726016384152236,
0.010557885910552418,
0.010176924938083637,
0.010056124803598562,
0.00986339245354922,
0.009310845272190718,
0.009241017416060596,
0.009030112299915188,
0.008863171480587977,
0.008576082934277009,
0.008517095159746899,
0.008503942054500408,
0.00816180961130714,
0.0077701099868396845,
0.007654299162732933,
0.0076129029730965855,
0.0075047412733034195,
0.007388012982827158,
0.007310780628064416,
0.007234181563090543,
0.007077525440428172,
0.006995406380474268,
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0.005389000441301466,
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0.00414400402973625,
0.00404711205176195,
0.004004704975857148,
0.003869935074176887,
0.0038654977528375244,
0.0036615939796134493,
0.0036339145954126435,
0.003433828537109971,
0.003308787142282129,
0.003251850608916604,
0.0030638460735708125,
0.003018540860353942,
0.002945973178757226,
0.002830170961686194,
0.002678909713452892,
0.002652379985347317,
0.0026486042042353514,
0.002617300797745101,
0.0026007777445142396,
0.002568989077629331,
0.002521358068833895,
0.0024262590345323714,
0.002246322328675912,
0.002067008173609392,
0.00191714343437535,
0.001909676287428288,
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8.74808793901799e-05,
5.655428862688998e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 86.66666666666667,
"precision": 90.04029304029304,
"recall": 93.76743390091555,
"f1": 91.64172988568653
},
"selection": {
"precision": 2.2118519488708692,
"recall": 0.8813559322033898,
"f1": 1.2599678748473135,
"jaccard": 0.6343549194951683
}
}
}