GenoTEX / output /regress /Psoriatic_Arthritis /significant_genes_condition_Gender.json
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{
"significant_genes": {
"Variable": [
"TMEM128",
"OPTN",
"ACOT2",
"QRSL1",
"OR56B1",
"HLA-DRB6",
"CRYBB2",
"PHC2",
"RBM7",
"SNHG12",
"DNAJC3",
"KLK1",
"RGL4",
"ZC2HC1A",
"MME",
"ENOSF1",
"ODAD3",
"DIPK1B",
"BAG3",
"MEG8",
"PTPN23",
"NBPF11",
"ZNF679",
"ATP5MK",
"ADAMDEC1",
"CNTNAP2",
"GRB14",
"LIG4",
"IGF2BP3",
"CHI3L2",
"RNF144B",
"GSTT1",
"PYROXD1",
"CPEB4",
"DSP",
"CABYR",
"CARMIL1",
"NQO2",
"KLHL26",
"SNORD16",
"PPP1R3E",
"MIX23",
"EEF1A2",
"SLC38A11",
"RPPH1",
"METTL2A",
"ZNF844",
"FBXW9",
"REEP4",
"INPP5E",
"FAM167A",
"POMZP3",
"TSPYL5",
"FBXO15"
],
"Coefficient": [
0.11342224401090323,
-0.08348954647652114,
-0.08104929631099733,
-0.07602250132014966,
0.06939273882155907,
-0.06545532003377309,
0.060447204463689716,
-0.058006926898173404,
-0.05651953264496545,
0.05611155979272224,
-0.054450714530611184,
0.05129108753511838,
0.04981409235648079,
-0.047821502748581164,
-0.046153425387498184,
0.045795830460279865,
-0.04487588016462297,
0.04472811210932592,
-0.04467816091591516,
0.04232101473907879,
0.04138185372377423,
0.040259843848884556,
-0.039708785988826024,
-0.037075156222839994,
-0.03323362255309686,
0.03223402659744152,
0.032175950691044654,
0.029840452829625247,
-0.027699564885345935,
0.026610592723935487,
0.02483094730709485,
-0.023541161860124976,
-0.021781894043797045,
0.021459617972953562,
-0.02035280541003646,
-0.019597389869269066,
0.01955547179379001,
0.019306114266020434,
0.019276249519117453,
0.018392277082064847,
-0.014902199569350044,
-0.013399591279175189,
-0.0118087328578871,
0.01145334143460275,
0.010035144635626929,
0.007866839005697533,
-0.006544848720743826,
-0.005297076192047728,
0.0022451047324211952,
0.002036724189702668,
0.0013886655527555506,
0.0012876270631845166,
-7.890046684775408e-05,
-2.8407911509235808e-05
],
"Absolute Coefficient": [
0.11342224401090323,
0.08348954647652114,
0.08104929631099733,
0.07602250132014966,
0.06939273882155907,
0.06545532003377309,
0.060447204463689716,
0.058006926898173404,
0.05651953264496545,
0.05611155979272224,
0.054450714530611184,
0.05129108753511838,
0.04981409235648079,
0.047821502748581164,
0.046153425387498184,
0.045795830460279865,
0.04487588016462297,
0.04472811210932592,
0.04467816091591516,
0.04232101473907879,
0.04138185372377423,
0.040259843848884556,
0.039708785988826024,
0.037075156222839994,
0.03323362255309686,
0.03223402659744152,
0.032175950691044654,
0.029840452829625247,
0.027699564885345935,
0.026610592723935487,
0.02483094730709485,
0.023541161860124976,
0.021781894043797045,
0.021459617972953562,
0.02035280541003646,
0.019597389869269066,
0.01955547179379001,
0.019306114266020434,
0.019276249519117453,
0.018392277082064847,
0.014902199569350044,
0.013399591279175189,
0.0118087328578871,
0.01145334143460275,
0.010035144635626929,
0.007866839005697533,
0.006544848720743826,
0.005297076192047728,
0.0022451047324211952,
0.002036724189702668,
0.0013886655527555506,
0.0012876270631845166,
7.890046684775408e-05,
2.8407911509235808e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 86.36363636363635,
"precision": 10.0,
"recall": 6.666666666666666,
"f1": 8.0
},
"selection": {
"precision": 0.888888888888889,
"recall": 2.0,
"f1": 1.2307692307692306,
"jaccard": 0.6349206349206349
}
}
}