GenoTEX / output /regress /Psoriatic_Arthritis /significant_genes_condition_None.json
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{
"significant_genes": {
"Variable": [
"TMEM128",
"ACOT2",
"OPTN",
"QRSL1",
"OR56B1",
"HLA-DRB6",
"CRYBB2",
"PHC2",
"SNHG12",
"DNAJC3",
"RGL4",
"KLK1",
"ZC2HC1A",
"RBM7",
"BAG3",
"ENOSF1",
"MME",
"ODAD3",
"MEG8",
"DIPK1B",
"NBPF11",
"ZNF679",
"PTPN23",
"ATP5MK",
"ADAMDEC1",
"LIG4",
"GRB14",
"CNTNAP2",
"IGF2BP3",
"CHI3L2",
"GSTT1",
"RNF144B",
"PYROXD1",
"CABYR",
"KLHL26",
"CARMIL1",
"CPEB4",
"DSP",
"NQO2",
"SNORD16",
"MIX23",
"SLC38A11",
"PPP1R3E",
"RPPH1",
"EEF1A2",
"METTL2A",
"ZNF844",
"FBXW9",
"REEP4",
"TSPYL5",
"FBXO15"
],
"Coefficient": [
0.10962926923165928,
-0.08434087065613807,
-0.08168268793923843,
-0.07457450065826304,
0.0711268835611934,
-0.06553798114920367,
0.05822473313110749,
-0.05539122163821995,
0.05507248473128902,
-0.05469196879095544,
0.05045587568856438,
0.0503198474402826,
-0.05002877497314327,
-0.04998145533809902,
-0.0484247789352,
0.04815554287642044,
-0.04678744419692293,
-0.04524410332103493,
0.04383773976718882,
0.04347457462218823,
0.04298621831986992,
-0.041574245397061345,
0.03922806565782602,
-0.034429428700199466,
-0.03409033765143491,
0.03349355092924883,
0.03345745183765537,
0.0322732586211844,
-0.030263381246392326,
0.027302576723857087,
-0.02557207387681479,
0.02474679649381298,
-0.024520881158833902,
-0.023109146800825976,
0.02305342179140709,
0.021691273114943857,
0.02149650832646798,
-0.02136266793701588,
0.021347781355568748,
0.015236829084653042,
-0.014201887830012378,
0.010732425629717742,
-0.010548303317931561,
0.009475687677647443,
-0.007826339650023544,
0.0063893774507548075,
-0.006203029968827269,
-0.00355554695310165,
0.0033879061242883483,
-0.002297718854249205,
-0.0008225436656863132
],
"Absolute Coefficient": [
0.10962926923165928,
0.08434087065613807,
0.08168268793923843,
0.07457450065826304,
0.0711268835611934,
0.06553798114920367,
0.05822473313110749,
0.05539122163821995,
0.05507248473128902,
0.05469196879095544,
0.05045587568856438,
0.0503198474402826,
0.05002877497314327,
0.04998145533809902,
0.0484247789352,
0.04815554287642044,
0.04678744419692293,
0.04524410332103493,
0.04383773976718882,
0.04347457462218823,
0.04298621831986992,
0.041574245397061345,
0.03922806565782602,
0.034429428700199466,
0.03409033765143491,
0.03349355092924883,
0.03345745183765537,
0.0322732586211844,
0.030263381246392326,
0.027302576723857087,
0.02557207387681479,
0.02474679649381298,
0.024520881158833902,
0.023109146800825976,
0.02305342179140709,
0.021691273114943857,
0.02149650832646798,
0.02136266793701588,
0.021347781355568748,
0.015236829084653042,
0.014201887830012378,
0.010732425629717742,
0.010548303317931561,
0.009475687677647443,
0.007826339650023544,
0.0063893774507548075,
0.006203029968827269,
0.00355554695310165,
0.0033879061242883483,
0.002297718854249205,
0.0008225436656863132
]
},
"cv_performance": {
"prediction": {
"accuracy": 86.36363636363635,
"precision": 10.0,
"recall": 6.666666666666666,
"f1": 8.0
},
"selection": {
"precision": 0.930232558139535,
"recall": 2.0,
"f1": 1.2698412698412698,
"jaccard": 0.6557377049180328
}
}
}