GenoTEX / output /regress /Rectal_Cancer /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"TRERF1",
"C18orf15",
"NR1H4",
"POLR3E",
"CCL20",
"RBKS",
"MAP9",
"CEP89",
"GNA15",
"PTGES3",
"REG1B",
"MEX3C",
"MYOCD",
"ALX3",
"BMP15",
"HSPB3",
"MIR1915HG",
"KLHL13",
"SERPINC1",
"M1AP",
"NGEF",
"GJA3",
"NDUFV3",
"KRBOX5",
"INTS10",
"L3MBTL4",
"DNASE1L1",
"KCND2",
"NME5",
"PPP1R7",
"CACNA1A",
"SERPINI2",
"CD40",
"COX15",
"IRX2",
"GJB7",
"STYX",
"PICSAR",
"VCPIP1",
"PLAAT1",
"TCN1",
"MAPK4",
"ARSG",
"PFDN6",
"KCTD16",
"NPFFR2",
"CYCS",
"ABCG4",
"BAIAP2L1",
"ANKRD20A20P",
"GALNT11",
"CDKN1C",
"OR2A20P",
"NKAIN2",
"RAB3C",
"CDK11A",
"TTTY6",
"SLC46A1",
"PEBP1",
"ARHGAP4",
"GDNF",
"FAM184B",
"FN1",
"GLYAT",
"RPRM",
"PNLIPRP2",
"MDH1B",
"HARBI1",
"SNX16",
"FGF5",
"NYNRIN",
"SASH1",
"ANKRD22",
"PLBD1",
"AURKC",
"TMPPE",
"FKBP4",
"APOL3",
"GRIK3",
"LY6D",
"ADAM32",
"KL",
"CEP15",
"PLEKHB1",
"ABHD10",
"TAS2R19",
"MOK",
"CCT6B",
"PCDHB5",
"ESPL1",
"XPC",
"KRT1",
"CREB3L2",
"LINC02860",
"HOXB9",
"CENPB",
"PAX7",
"H1-2",
"GAA",
"PCDHA4",
"MRPS18A",
"PIK3R3",
"MUTYH",
"MMP13",
"NAPRT",
"TMSB4Y",
"LYRM9",
"GSTM4",
"POGLUT1",
"BMP8A",
"FOXD2",
"CRP",
"LINC02897",
"PCDHGB4",
"SLC15A2",
"EXT2",
"LRIF1",
"PLAAT2",
"ALKBH2",
"PCDHA6",
"LMBR1L",
"TMEM35A",
"NKPD1",
"ZNF772",
"NWD2",
"DUS4L",
"CCDC73",
"OR2B6",
"GLB1L2",
"ERCC6",
"RASGEF1B",
"FNDC3B",
"SIGLEC12",
"TAMM41",
"SYT4",
"POLR2E",
"DNAI3",
"NFIL3",
"KYAT3",
"CD300LD-AS1",
"CFAP144",
"ENC1",
"CKMT2",
"TMPRSS5",
"CKM",
"HEATR5B",
"ANKRD2",
"CHMP2A",
"CRNDE",
"DGKE",
"SURF1",
"IFIT1",
"GRB14",
"ZNF334",
"ZCWPW2",
"DNASE2B",
"VWCE",
"REG1A",
"TONSL",
"TICAM1",
"ANK3",
"RIMKLB",
"PCDHB16",
"YBEY",
"GET1",
"NAT8B",
"RNASE2",
"PEX6",
"CEP164",
"FAM138E",
"USP9Y",
"PTEN",
"SSTR5",
"ZNF764",
"SERPINB9",
"VAX1",
"OR2A1",
"NSG2",
"GZMB",
"ANKRD18A",
"ARL16",
"ZNF37BP",
"GLYATL1",
"B4GALNT4"
],
"Coefficient": [
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],
"Absolute Coefficient": [
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0.06442384403760038,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 68.16326530612244,
"precision": 49.1171679197995,
"recall": 52.85695006747638,
"f1": 50.40103510691746
},
"selection": {
"precision": 0.37198105148714766,
"recall": 4.615384615384615,
"f1": 0.6884635832004252,
"jaccard": 0.3475321162947938
}
}
}