GenoTEX / output /regress /Rheumatoid_Arthritis /significant_genes_condition_Obesity.json
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{
"significant_genes": {
"Variable": [
"CYP1A1",
"MAP7D2",
"PAPPA",
"RIMKLA",
"GAREM2",
"ALDH8A1",
"DHRS1",
"GCLM",
"CHP2",
"HS3ST3A1",
"LIMD1-AS1",
"ALOX12",
"ADGRB3",
"WDR64",
"PSORS1C1",
"PPP4R3A",
"ITFG2",
"TF",
"AXIN2",
"FAM98A",
"CD24",
"HAND2-AS1",
"PHRF1",
"TTTY1",
"TDRD9",
"CCN6",
"MIR4755",
"PRM1",
"FGF13-AS1",
"USPL1",
"MGMT",
"GPR62",
"SLC16A9",
"QRICH1",
"FAM224B",
"ZFAND4",
"PHAF1",
"NFATC3",
"ZNF568",
"GHRLOS",
"ZZZ3",
"OTOGL",
"LINC01587",
"LRAT",
"EGFL6",
"LIAT1",
"IL12RB2",
"C10orf88",
"IGLV3-10",
"NTNG1",
"NDUFA6",
"NPAS2",
"KCNJ10",
"FLVCR1-DT",
"LRRC55",
"FAM24B",
"RGS11",
"SBNO1",
"MAGEC2",
"CNGA4",
"EPPK1",
"RNF11P2",
"TRH",
"POU6F2-AS2",
"ADIRF-AS1",
"EXOC3-AS1",
"RAB40AL",
"POM121L2",
"AFMID",
"CNTN6",
"CSTF3",
"HARBI1",
"MRPS27",
"FOLR3",
"CXCL6",
"OCM2",
"HDAC10",
"FOXRED2",
"SIK1",
"PER3",
"LAMB4",
"H2AP",
"LRRN2",
"SYCP2L",
"MT1E",
"ESRG",
"C10orf126",
"ERVW-1",
"SOCS2",
"RUFY3",
"NDUFC2",
"YEATS4",
"B3GNT3",
"ZNF740",
"XAB2",
"SF3B6",
"ASB7",
"CDH2",
"SFXN2",
"NXPH3",
"ZNF790-AS1",
"ST7-OT4",
"USP26",
"IGFBP1",
"LINC01554",
"SMIM17",
"CHIA",
"PELI1",
"EDARADD",
"OR2L13",
"GAS7",
"IFNK",
"FSCN2",
"SCGB1C1",
"ACTR6",
"CDKL5",
"NGF",
"KRTAP19-1",
"QRICH2",
"BCORP1",
"MEPCE",
"SYT13",
"THAP9-AS1",
"CALHM3",
"ZNF880",
"OPN1LW",
"KRBOX1",
"CTBP1",
"RPL10L",
"MAGEB2",
"TTC32",
"IL1RAP",
"ANKRD30A",
"SLCO1B3",
"ZFAND5",
"ADGRE1",
"SNTG1",
"XIST",
"MRPS11",
"ADTRP",
"MLYCD",
"RPS4Y1",
"PDZK1IP1",
"GYS2",
"GUCY1A1",
"BCO1",
"ESPNP",
"GABPB1-AS1",
"ZNF513",
"GREM2",
"TBCA",
"GTF2B",
"EIF1AY",
"ITPK1-AS1",
"PRKXP1",
"PGBD3",
"TXLNGY",
"CASC18",
"UNC93A",
"KCNH4",
"TTTY1B",
"OPN1MW",
"OPN1MW2"
],
"Coefficient": [
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],
"Absolute Coefficient": [
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0.03985773921570607,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 90.0,
"precision": 76.0,
"recall": 70.95238095238096,
"f1": 72.32900432900433
},
"selection": {
"precision": 1.4770335571464837,
"recall": 0.821917808219178,
"f1": 1.0558713062224587,
"jaccard": 0.5312480329813021
}
}
}