GenoTEX / output /regress /Schizophrenia /significant_genes_condition_Age.json
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{
"significant_genes": {
"Variable": [
"KDM4D",
"GRB14",
"ARID5A",
"DNAJC28",
"MED18",
"GASK1B",
"HSPB2",
"COMT",
"PKN1",
"SP3P",
"ZNF239",
"PLK4",
"SULF1",
"BHMT2",
"LRRC37BP1",
"VIPR2",
"NFX1",
"CDHR1",
"CRLF3",
"USP6NL",
"POP1",
"LCMT2",
"GGT5",
"PSPH",
"IFI35",
"FARS2",
"GSTM5",
"KLHL9",
"PPAN",
"A4GALT",
"SLC2A1",
"HMGB2",
"CTR9",
"FBXL6",
"SGF29",
"ALG11",
"PAFAH1B2",
"LMOD1",
"SLC26A4",
"FBXO9",
"XIAP",
"MIR3917",
"SLC12A6",
"LIMK2",
"VAX2",
"FAM110D",
"GYG2",
"CHRNA4",
"BMP4",
"DDX47",
"PSMD5",
"TEFM",
"DGKD",
"DPYS",
"SIGIRR"
],
"Coefficient": [
-0.16277030043435137,
0.07644094921464951,
0.06963945323839749,
-0.058304234672145634,
-0.051919324614062914,
-0.051580318456782556,
-0.05112310525539403,
0.038577626756126526,
0.03632274943600414,
0.035400759009621786,
-0.03380498047013999,
-0.03167674793314847,
-0.030057379046363516,
0.026754904815577366,
-0.026277248763894936,
-0.025980485411536417,
-0.025719116673758143,
0.02478034338107633,
-0.02405387165944697,
-0.023144559326940498,
-0.020560855843557976,
-0.018752050118820394,
0.018505881857343538,
0.018041191936937498,
0.016208435725232406,
-0.012834243488093356,
0.01111420746234677,
-0.00994631713758705,
-0.009151634387797633,
0.009092423393011202,
0.008912076238431071,
0.00826662541508941,
-0.007132390422213761,
0.006581559414781773,
0.006344468766361591,
-0.004014047696376531,
0.003928222078177085,
0.0039062446702145927,
-0.003591226860275434,
-0.0033159395204501387,
-0.003184669315771965,
-0.0026788481325441,
-0.0023567023627366615,
0.0023454365222421243,
-0.0021542725035294955,
-0.0018147381786155104,
0.001669101370344632,
-0.0015588013122462292,
0.0013549229674224318,
-0.0010519756644246623,
-0.0010129154948484713,
-0.0009286879798817298,
0.0004406561039010463,
-4.066695800965307e-05,
3.7466464202669044e-05
],
"Absolute Coefficient": [
0.16277030043435137,
0.07644094921464951,
0.06963945323839749,
0.058304234672145634,
0.051919324614062914,
0.051580318456782556,
0.05112310525539403,
0.038577626756126526,
0.03632274943600414,
0.035400759009621786,
0.03380498047013999,
0.03167674793314847,
0.030057379046363516,
0.026754904815577366,
0.026277248763894936,
0.025980485411536417,
0.025719116673758143,
0.02478034338107633,
0.02405387165944697,
0.023144559326940498,
0.020560855843557976,
0.018752050118820394,
0.018505881857343538,
0.018041191936937498,
0.016208435725232406,
0.012834243488093356,
0.01111420746234677,
0.00994631713758705,
0.009151634387797633,
0.009092423393011202,
0.008912076238431071,
0.00826662541508941,
0.007132390422213761,
0.006581559414781773,
0.006344468766361591,
0.004014047696376531,
0.003928222078177085,
0.0039062446702145927,
0.003591226860275434,
0.0033159395204501387,
0.003184669315771965,
0.0026788481325441,
0.0023567023627366615,
0.0023454365222421243,
0.0021542725035294955,
0.0018147381786155104,
0.001669101370344632,
0.0015588013122462292,
0.0013549229674224318,
0.0010519756644246623,
0.0010129154948484713,
0.0009286879798817298,
0.0004406561039010463,
4.066695800965307e-05,
3.7466464202669044e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 77.14285714285714,
"precision": 83.33333333333333,
"recall": 75.0,
"f1": 75.80952380952381
},
"selection": {
"precision": 4.286945304437564,
"recall": 0.43478260869565216,
"f1": 0.7887129333632573,
"jaccard": 0.39638569943430096
}
}
}