GenoTEX / output /regress /Schizophrenia /significant_genes_condition_Bipolar_disorder.json
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{
"significant_genes": {
"Variable": [
"KDM4D",
"GRB14",
"HSPB2",
"NFX1",
"MED18",
"PAFAH1B2",
"A4GALT",
"SP3P",
"GAL3ST4",
"USP6NL",
"GASK1B",
"DNAJC28",
"BHMT2",
"SULF1",
"LRRC37BP1",
"ARL15",
"IFI35",
"MIR3917",
"GPNMB",
"VIPR2",
"PKN1",
"CHRNA4",
"PLK4",
"FBXL6",
"XIAP",
"FAM110D",
"KLHL9",
"ZNF239",
"GRIN2D",
"DGKD",
"PURG",
"SLC12A6",
"IFITM2",
"LIMK2",
"PEX6",
"LCMT2",
"TLL2",
"MANF",
"PSMD5",
"ZFP2",
"PDZRN4",
"CTR9",
"SLC12A1",
"SLC35A3",
"ALG11",
"NKX2-5",
"ATP5MC2P1",
"FBXO9",
"UBE3B",
"RBM3",
"UTP14C",
"MYBPH"
],
"Coefficient": [
-0.15123099736089302,
0.10017285661870662,
-0.0738448059784616,
-0.07302004163318618,
-0.05318572266389769,
0.04651393358053463,
0.04281915936730535,
0.04280385687203466,
-0.04163314851297009,
-0.041268019477152446,
-0.036379635287033384,
-0.03450491347386867,
0.032493490030389684,
-0.030474389804536595,
-0.028778046540491754,
-0.024342205612468512,
0.023847832370232948,
-0.02368364735283065,
0.021672110444891004,
-0.021011039770962654,
0.02079893470437151,
-0.020408210587241887,
-0.018821022238620425,
0.018736740821114452,
-0.016890568931936936,
-0.01522811596767165,
-0.014380618237199935,
-0.014110325936129601,
-0.013447728614763134,
0.011595874855724442,
-0.010874615819072415,
-0.009679972991269731,
0.009165740691117778,
0.00725877995253241,
0.006297175812515597,
-0.0061497033438023445,
-0.0053525567924826096,
-0.0050253944159095775,
-0.0031864409794386,
-0.0030455355410050184,
-0.002990049820108725,
-0.002954739661469873,
-0.0024016526535541203,
-0.0022047401613214655,
-0.002198299466073807,
-0.0021103137655699893,
0.001897383749017851,
-0.0009125430594437721,
-0.0005117092826322985,
-0.00021478734253951764,
-6.996737266017349e-05,
-3.2684310806829974e-05
],
"Absolute Coefficient": [
0.15123099736089302,
0.10017285661870662,
0.0738448059784616,
0.07302004163318618,
0.05318572266389769,
0.04651393358053463,
0.04281915936730535,
0.04280385687203466,
0.04163314851297009,
0.041268019477152446,
0.036379635287033384,
0.03450491347386867,
0.032493490030389684,
0.030474389804536595,
0.028778046540491754,
0.024342205612468512,
0.023847832370232948,
0.02368364735283065,
0.021672110444891004,
0.021011039770962654,
0.02079893470437151,
0.020408210587241887,
0.018821022238620425,
0.018736740821114452,
0.016890568931936936,
0.01522811596767165,
0.014380618237199935,
0.014110325936129601,
0.013447728614763134,
0.011595874855724442,
0.010874615819072415,
0.009679972991269731,
0.009165740691117778,
0.00725877995253241,
0.006297175812515597,
0.0061497033438023445,
0.0053525567924826096,
0.0050253944159095775,
0.0031864409794386,
0.0030455355410050184,
0.002990049820108725,
0.002954739661469873,
0.0024016526535541203,
0.0022047401613214655,
0.002198299466073807,
0.0021103137655699893,
0.001897383749017851,
0.0009125430594437721,
0.0005117092826322985,
0.00021478734253951764,
6.996737266017349e-05,
3.2684310806829974e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 71.42857142857142,
"precision": 76.66666666666666,
"recall": 58.33333333333333,
"f1": 65.14285714285714
},
"selection": {
"precision": 5.447698721988629,
"recall": 0.5652173913043479,
"f1": 1.022981527182044,
"jaccard": 0.5142116061221478
}
}
}