GenoTEX / output /regress /Schizophrenia /significant_genes_condition_Breast_Cancer.json
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{
"significant_genes": {
"Variable": [
"KDM4D",
"GRB14",
"DNAJC28",
"MED18",
"USP6NL",
"KLHL9",
"GASK1B",
"SLC12A6",
"HSPB2",
"SULF1",
"CDHR1",
"POP1",
"COMT",
"PAFAH1B2",
"PSPH",
"XIAP",
"ARID5A",
"LCMT2",
"A4GALT",
"ZNF239",
"VIPR2",
"PKN1",
"CRLF3",
"HMGB2",
"PLK4",
"NFX1",
"CHRNA4",
"BHMT2",
"FBXL6",
"CTR9",
"PPAN",
"GAL3ST4",
"DGKD",
"PSMD5",
"NKX2-5",
"GRIN2D",
"ARL15",
"DDX47",
"IFI35",
"ALG11",
"LRRC37BP1",
"VAX2",
"SLC12A1",
"MIR3917",
"GSTM5",
"ZC3H14",
"ZFP2",
"SLC26A4",
"PURG",
"PRKG2",
"PEX6",
"EEF1AKMT3",
"ICAM3",
"DDX31",
"LIMK2",
"LMOD1"
],
"Coefficient": [
-0.1461402685912908,
0.10783969528776916,
-0.05164206772213212,
-0.04733173025519444,
-0.04204732942504587,
-0.03947297110683776,
-0.038513915482589214,
-0.036776763725832246,
-0.0353748055657987,
-0.03527925926820367,
0.03279527230979876,
-0.032591457289141215,
0.03151642127247281,
0.030248476923593292,
0.02898234656460376,
-0.026961998051899992,
0.023842170676287477,
-0.023447245162614334,
0.023173596223600743,
-0.022363347701898288,
-0.022303441130801183,
0.02205165635424961,
-0.019893386850400742,
0.019061334138504592,
-0.018241258122698126,
-0.017275386551572958,
-0.0158013907600338,
0.013825155735614013,
0.013803875274619548,
-0.012549026854493618,
-0.011628525540847041,
-0.010140525425842201,
0.009833311443944776,
-0.009784222161908,
-0.009047551263327862,
-0.008302509208993497,
-0.007766173333404287,
-0.0070755207133192015,
0.006767322049831046,
-0.006299137929489297,
-0.005582437270824732,
-0.005009906203077702,
-0.004563717842417987,
-0.004489564204004782,
0.004059237105164218,
-0.0035771676725196056,
-0.0031466218552945,
-0.0026118786710217046,
-0.0015956940489130521,
-0.0013086436064989571,
0.0012227645530404243,
0.000586496342971695,
0.0003194089191818569,
6.030392224258849e-05,
7.5332405005532464e-06,
2.0822680494670235e-06
],
"Absolute Coefficient": [
0.1461402685912908,
0.10783969528776916,
0.05164206772213212,
0.04733173025519444,
0.04204732942504587,
0.03947297110683776,
0.038513915482589214,
0.036776763725832246,
0.0353748055657987,
0.03527925926820367,
0.03279527230979876,
0.032591457289141215,
0.03151642127247281,
0.030248476923593292,
0.02898234656460376,
0.026961998051899992,
0.023842170676287477,
0.023447245162614334,
0.023173596223600743,
0.022363347701898288,
0.022303441130801183,
0.02205165635424961,
0.019893386850400742,
0.019061334138504592,
0.018241258122698126,
0.017275386551572958,
0.0158013907600338,
0.013825155735614013,
0.013803875274619548,
0.012549026854493618,
0.011628525540847041,
0.010140525425842201,
0.009833311443944776,
0.009784222161908,
0.009047551263327862,
0.008302509208993497,
0.007766173333404287,
0.0070755207133192015,
0.006767322049831046,
0.006299137929489297,
0.005582437270824732,
0.005009906203077702,
0.004563717842417987,
0.004489564204004782,
0.004059237105164218,
0.0035771676725196056,
0.0031466218552945,
0.0026118786710217046,
0.0015956940489130521,
0.0013086436064989571,
0.0012227645530404243,
0.000586496342971695,
0.0003194089191818569,
6.030392224258849e-05,
7.5332405005532464e-06,
2.0822680494670235e-06
]
},
"cv_performance": {
"prediction": {
"accuracy": 68.57142857142858,
"precision": 68.33333333333333,
"recall": 71.66666666666666,
"f1": 68.14285714285714
},
"selection": {
"precision": 4.195695669572176,
"recall": 0.43478260869565216,
"f1": 0.787731112045025,
"jaccard": 0.39557618160200125
}
}
}