GenoTEX / output /regress /Schizophrenia /significant_genes_condition_COVID-19.json
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{
"significant_genes": {
"Variable": [
"KDM4D",
"MED18",
"GRB14",
"ARID5A",
"NFX1",
"SP3P",
"POP1",
"DNAJC28",
"GASK1B",
"HSPB2",
"PSPH",
"LRRC37BP1",
"USP6NL",
"GGT5",
"GYG2",
"PLK4",
"COMT",
"FZD9",
"XIAP",
"IFI35",
"PKN1",
"SLC12A1",
"LIMK2",
"CHRNA4",
"DGKD",
"SULF1",
"SNX15",
"KRT16",
"ALG11",
"FARS2",
"GPNMB",
"VIPR2",
"FAM110D",
"TEFM",
"SLC12A6",
"SIGIRR",
"EEF1AKMT3",
"ZNF239",
"RBM3",
"FBXL6",
"LCMT2",
"CTR9",
"ICAM3",
"PSMD5",
"KLHL9",
"HMGB2",
"A4GALT",
"CDHR1",
"OGG1"
],
"Coefficient": [
-0.14564996609231037,
-0.07578880367656986,
0.07007867257096662,
0.06665128237897462,
-0.05205425895318343,
0.050761975263940086,
-0.04737467566126771,
-0.04723595254298729,
-0.04598634665757777,
-0.040213098262729216,
0.03931631142325328,
-0.038888182887850405,
-0.03406903204354161,
0.029080091879676827,
0.025600056764812144,
-0.021482987856335126,
0.019639002886810607,
0.018928762101465005,
-0.0177260033676134,
0.01634906832392685,
0.016129186580918674,
-0.015792489128987005,
0.014987296459516398,
-0.01442661130772668,
0.013613473553185847,
-0.01344113513499832,
-0.01311677520478544,
-0.013114924745571781,
-0.011374809915812724,
-0.009283263082699722,
0.008596306146759623,
-0.008493494625815225,
-0.008159193694746845,
-0.006964834265909426,
-0.0064207167370367415,
0.006176698737874868,
0.005914061927948093,
-0.005836463624563202,
-0.004602015145069923,
0.004451037623186742,
-0.003908841448769214,
-0.003005155021990453,
0.002969049915254043,
-0.0016594467561032392,
-0.0014932627852652465,
0.0013758255179337515,
0.0010580122695468032,
0.0004442026950571087,
-3.599820273104443e-05
],
"Absolute Coefficient": [
0.14564996609231037,
0.07578880367656986,
0.07007867257096662,
0.06665128237897462,
0.05205425895318343,
0.050761975263940086,
0.04737467566126771,
0.04723595254298729,
0.04598634665757777,
0.040213098262729216,
0.03931631142325328,
0.038888182887850405,
0.03406903204354161,
0.029080091879676827,
0.025600056764812144,
0.021482987856335126,
0.019639002886810607,
0.018928762101465005,
0.0177260033676134,
0.01634906832392685,
0.016129186580918674,
0.015792489128987005,
0.014987296459516398,
0.01442661130772668,
0.013613473553185847,
0.01344113513499832,
0.01311677520478544,
0.013114924745571781,
0.011374809915812724,
0.009283263082699722,
0.008596306146759623,
0.008493494625815225,
0.008159193694746845,
0.006964834265909426,
0.0064207167370367415,
0.006176698737874868,
0.005914061927948093,
0.005836463624563202,
0.004602015145069923,
0.004451037623186742,
0.003908841448769214,
0.003005155021990453,
0.002969049915254043,
0.0016594467561032392,
0.0014932627852652465,
0.0013758255179337515,
0.0010580122695468032,
0.0004442026950571087,
3.599820273104443e-05
]
},
"cv_performance": {
"prediction": {
"accuracy": 77.14285714285714,
"precision": 80.0,
"recall": 75.0,
"f1": 75.80952380952381
},
"selection": {
"precision": 4.409854851031321,
"recall": 0.43478260869565216,
"f1": 0.7911751507511924,
"jaccard": 0.3973174838113518
}
}
}