GenoTEX / output /regress /Schizophrenia /significant_genes_condition_Depression.json
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{
"significant_genes": {
"Variable": [
"AADAC",
"AGBL3",
"KDM4D",
"ADAM17",
"ABHD17B",
"AANAT",
"ABCD2",
"A4GALT",
"ACO1",
"CEP72",
"ACOT1",
"ABCE1",
"ACSL5",
"A1CF",
"ACRV1",
"AGBL5",
"ADGRG1",
"BHMT2",
"ANGEL2",
"ABCB1",
"CDA",
"ATP5MC2P1",
"ADIRF",
"ACBD4",
"ACAD10",
"ACTL7A",
"CH25H",
"ARB2A",
"ABCA8",
"C11orf71",
"ABHD10",
"GCK",
"AASS",
"MRE11",
"DTYMK",
"ACTR5",
"BMP4",
"GASK1B",
"DNAJC28",
"ARHGAP8",
"ABHD11",
"B3GNTL1",
"CTNNAL1",
"ARHGAP25",
"ASIC3",
"ANXA2",
"CROCCP3",
"FZD9",
"HPS1",
"ALG11",
"BTF3P11",
"CRTAM",
"BRS3",
"DNAJC17",
"ARHGAP22",
"AP4M1",
"ABI1",
"DLEU1",
"RNF32",
"ADI1",
"CRLF3",
"APOL2",
"CAPN7",
"AEBP1",
"ATP2C2",
"ACSF2",
"ABCD1",
"AKAP8",
"ARSL",
"AIRE",
"AZGP1",
"DHRS12",
"ARID5A",
"ANGPTL2",
"GRB14",
"BBS10",
"ADRA1B",
"SP3P",
"DHX35",
"CD82",
"ANKRD27",
"AMDHD2",
"ADCY7",
"SULF1",
"ASTN2",
"FAM110D",
"AQP9",
"AKAP17A",
"BHMT",
"GYG2",
"ACTG2",
"ACAA2",
"ACOT8",
"ATP10B",
"CT55",
"AATF",
"EPCAM",
"ABCG5",
"HR",
"ACTR8",
"GAL3ST4",
"AOC2",
"CCL5",
"ARAP2",
"ASPHD1",
"TLCD3A",
"AGO4",
"ERVK3-2",
"ABCC6",
"USP6NL",
"AFF4",
"FBXL6",
"ABO",
"ANXA2P2",
"ABCC3",
"CBX4",
"POP1",
"ARL15",
"AAMDC",
"ADA2",
"PLK4",
"CDH20",
"BYSL",
"CPPED1",
"ASXL2",
"AMELX",
"AGRP",
"ALDH1L1",
"FBXO5",
"ABLIM1",
"ADAM11",
"GPNMB",
"TEFM",
"GSTT1",
"APOA4",
"ABL1",
"ADGRA2",
"EEF1AKMT3",
"DKKL1",
"ACP6",
"UBE3B",
"ARHGAP4",
"CRIPTO",
"SNX15",
"NFX1",
"ARL3",
"CA5BP1",
"CTSH",
"CADM4",
"ABHD2",
"ABCA5",
"ACOT2",
"CRIPTO3"
],
"Coefficient": [
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0.04063379585051351,
-0.04043461186147836,
-0.037293013583370956,
0.03645902233552833,
-0.035771619142889635,
-0.033446566055175875,
-0.03301912759744579,
0.03072830807813718,
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-0.024971630585829026,
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-0.0020693407972416384,
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-0.0008034314259433438,
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-0.0006390412239043412,
-0.0006338142586692758,
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0.0005567954778872465,
-0.0005509414314490272,
0.00048298429522509464,
-0.0004160161407912574,
0.00040436240203430305,
-0.00038793754670491835,
0.0003252870760227501,
-0.00031377790695701725,
0.00029865261241649555,
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0.00022404091445949638,
-0.00021419969181435723,
0.00021358543007838433,
-0.0002077631391634905,
0.0001819768607310632,
-0.00016023042736898412,
-0.00010238622548013031,
-6.670426979170774e-05,
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-5.4125893707275056e-05,
-4.071786758416065e-05,
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-2.842027304696264e-05,
-1.1584596633358256e-05,
1.569841150085646e-06,
-1.1660429125211696e-06,
-3.97326758042706e-07,
-3.097720492815727e-19
],
"Absolute Coefficient": [
0.08004119393307695,
0.07819852511266548,
0.06507164432493302,
0.06485796944277203,
0.05826673619860064,
0.05503521333422438,
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]
},
"cv_performance": {
"prediction": {
"accuracy": 77.14285714285714,
"precision": 80.47619047619047,
"recall": 76.66666666666666,
"f1": 75.22344322344323
},
"selection": {
"precision": 3.4821411342156154,
"recall": 1.0,
"f1": 1.5531981900304423,
"jaccard": 0.783483911348734
}
}
}