GenoTEX / output /regress /Schizophrenia /significant_genes_condition_Prostate_Cancer.json
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{
"significant_genes": {
"Variable": [
"KDM4D",
"MED18",
"DNAJC28",
"ARID5A",
"BHMT2",
"PLK4",
"GASK1B",
"POP1",
"GRB14",
"ALG11",
"SULF1",
"COMT",
"USP6NL",
"CDHR1",
"HSPB2",
"CRLF3",
"GSTM5",
"VIPR2",
"FBXO9",
"NFX1",
"PAFAH1B2",
"PSPH",
"SLC2A1",
"SGF29",
"ZNF239",
"CTR9",
"DGKD",
"LCMT2",
"HSF1",
"IFI35",
"ATP5MC2P1",
"SP3P",
"NUP107",
"FARS2",
"XIAP",
"CES1",
"SIGIRR",
"CLDN5",
"PKN1",
"MIR3917",
"KLHL9",
"MC4R",
"TLL2",
"SLC26A4",
"ARL15",
"LRRC37BP1",
"LMOD1",
"GYG2",
"ZFP2"
],
"Coefficient": [
-0.15668180433443327,
-0.07792790154894919,
-0.06717230824200911,
0.06007504323030711,
0.05581192212003923,
-0.05416001385135213,
-0.05248966798084882,
-0.05189959160938045,
0.04926810033202721,
-0.0403317583106335,
-0.03908643180607168,
0.035203492588135876,
-0.03307915933525829,
0.03036349147879955,
-0.02876024252529037,
-0.022663881786008578,
0.022251053270466878,
-0.021197354811276832,
-0.020735253935403028,
-0.019145565110389364,
0.018195786530419755,
0.017017567127385724,
0.01661075627336178,
0.015518476305779995,
-0.012973805830556497,
-0.012483474449257813,
0.012350901608018248,
-0.012327889554053947,
0.011014431646181934,
0.01098170714397195,
0.01086754657622695,
0.006909961235121072,
-0.006722842303623334,
-0.006475396036592823,
-0.005461190006763969,
0.004955173680990245,
0.003771474077927325,
0.0035696050127243385,
0.0021277113335011737,
-0.0020849736675004186,
-0.001879634254140968,
-0.0018065421743609304,
-0.001489011774748418,
-0.0009918822471664576,
-0.0005780099865117916,
-0.0004483067552398052,
0.0003697585437580104,
0.00022269879593168345,
-0.00022133110280017602
],
"Absolute Coefficient": [
0.15668180433443327,
0.07792790154894919,
0.06717230824200911,
0.06007504323030711,
0.05581192212003923,
0.05416001385135213,
0.05248966798084882,
0.05189959160938045,
0.04926810033202721,
0.0403317583106335,
0.03908643180607168,
0.035203492588135876,
0.03307915933525829,
0.03036349147879955,
0.02876024252529037,
0.022663881786008578,
0.022251053270466878,
0.021197354811276832,
0.020735253935403028,
0.019145565110389364,
0.018195786530419755,
0.017017567127385724,
0.01661075627336178,
0.015518476305779995,
0.012973805830556497,
0.012483474449257813,
0.012350901608018248,
0.012327889554053947,
0.011014431646181934,
0.01098170714397195,
0.01086754657622695,
0.006909961235121072,
0.006722842303623334,
0.006475396036592823,
0.005461190006763969,
0.004955173680990245,
0.003771474077927325,
0.0035696050127243385,
0.0021277113335011737,
0.0020849736675004186,
0.001879634254140968,
0.0018065421743609304,
0.001489011774748418,
0.0009918822471664576,
0.0005780099865117916,
0.0004483067552398052,
0.0003697585437580104,
0.00022269879593168345,
0.00022133110280017602
]
},
"cv_performance": {
"prediction": {
"accuracy": 74.28571428571429,
"precision": 80.0,
"recall": 65.0,
"f1": 70.47619047619047
},
"selection": {
"precision": 3.531081081081081,
"recall": 0.34782608695652173,
"f1": 0.6324803848566154,
"jaccard": 0.3179631572624718
}
}
}