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b/p3/regress/Height/significant_genes_condition_Type_2_Diabetes.json new file mode 100644 index 0000000000000000000000000000000000000000..23a8203569b4d03e28719a0cfb24372d669ebc4c --- /dev/null +++ b/p3/regress/Height/significant_genes_condition_Type_2_Diabetes.json @@ -0,0 +1,109 @@ +{ + "significant_genes": { + "Variable": [ + "RPS4Y1", + "FGGY", + "NCBP2", + "EHMT1", + "NUF2", + "MRTFA", + "LRP2", + "EMILIN1", + "RPLP2", + "SGSM3", + "ST3", + "NAMPT", + "ALG10B", + "AFAP1", + "MIR503", + "SDHA", + "STARD7", + "STEAP1", + "MFSD4B", + "TEK", + "IGKV3-20", + "SPTY2D1", + "MINAR1", + "GAS6", + "ZFP91", + "ZC3HC1", + "IH", + "TAF4", + "POLR1H" + ], + "Coefficient": [ + 0.04011669569147793, + -0.011294530780960921, + 0.007868389222789825, + -0.007657103577010651, + 0.0076011047093799316, + 0.004945057619794611, + -0.004270703752886285, + -0.004150852036669527, + -0.004002862069906086, + 0.003957458316692742, + 0.0037095792026070884, + 0.003349968441383188, + -0.002916856615074975, + 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b/p3/regress/Hepatitis/significant_genes_condition_Gender.json @@ -0,0 +1,75 @@ +{ + "significant_genes": { + "Variable": [ + "ASPDH", + "MARCO", + "ARID3C", + "FXYD1", + "JUN", + "NDST3", + "UBE2NL", + "OR2M7", + "CXCL14", + "ANO10", + "LCAT", + "TMEM132E", + "SPTBN2", + "HGFAC", + "AVL9", + "APOOL", + "FAM20B" + ], + "Coefficient": [ + -0.13288098637253087, + -0.10081459889315549, + -0.0430653673182902, + -0.032316069743175246, + 0.02957686829109202, + -0.01503183916010764, + 0.013997268818362274, + -0.013939317321629638, + -0.006806773579124127, + 0.006716757928838746, + -0.0060706148609433646, + -0.005988889324940165, + -0.0030843334441970995, + -0.002298117078748089, + 0.0021614139925021556, + 0.0016565910166020934, + 0.0011625156636171363 + ], + "Absolute Coefficient": [ + 0.13288098637253087, + 0.10081459889315549, + 0.0430653673182902, + 0.032316069743175246, + 0.02957686829109202, + 0.01503183916010764, + 0.013997268818362274, + 0.013939317321629638, + 0.006806773579124127, + 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a/p3/regress/Hepatitis/significant_genes_condition_Obesity.json b/p3/regress/Hepatitis/significant_genes_condition_Obesity.json new file mode 100644 index 0000000000000000000000000000000000000000..a5eadd037164b48dc15f545a000e9f27b36ad2bb --- /dev/null +++ b/p3/regress/Hepatitis/significant_genes_condition_Obesity.json @@ -0,0 +1,45 @@ +{ + "significant_genes": { + "Variable": [ + "CCL4", + "EDG4", + "ZBTB17", + "RPS6KA5", + "ADH5", + "CXCL9", + "DOCK4" + ], + "Coefficient": [ + -0.10334193371063793, + -0.10109591492366928, + 0.01667520388083674, + 0.011557304311115223, + 0.007692887054573727, + -0.006011727950458716, + 0.005464510212136043 + ], + "Absolute Coefficient": [ + 0.10334193371063793, + 0.10109591492366928, + 0.01667520388083674, + 0.011557304311115223, + 0.007692887054573727, + 0.006011727950458716, + 0.005464510212136043 + ] + }, + "cv_performance": { + "prediction": { + "accuracy": 85.80645161290322, + "precision": 84.88157894736841, + "recall": 88.3684012066365, + "f1": 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a/p3/regress/Huntingtons_Disease/significant_genes_condition_Breast_Cancer.json b/p3/regress/Huntingtons_Disease/significant_genes_condition_Breast_Cancer.json new file mode 100644 index 0000000000000000000000000000000000000000..b658d3a2c450ca7bb62cca8505677b2cfd13088e --- /dev/null +++ b/p3/regress/Huntingtons_Disease/significant_genes_condition_Breast_Cancer.json @@ -0,0 +1,783 @@ +{ + "significant_genes": { + "Variable": [ + "NDUFB11", + "CTAG1A", + "FGF7P6", + "BNIP3L", + "CAST", + "SLC35A3", + "CAV1", + "LMTK3", + "RBM10", + "IFITM2", + "SART3", + "FAM187B", + "SOX15", + "ZNF662", + "NIPA2", + "MPV17L", + "LHCGR", + "NEUROD2", + "GABPB1-AS1", + "CCS", + "FBXL2", + "IGKV1-37", + "RTF2", + "C15orf40", + "USP10", + "TTYH1", + "TTI1", + "MEA1", + "STX18", + "CUTALP", + "COL11A1", + "ZIC1", + "PDCL", + "ZNF552", + "MARCHF10", + "GXYLT2", + "PPM1L", + "SLC43A2", + "KLHL14", + "MSTO2P", + "ZNF528", + "NPEPL1", + "CCP110", + "GTPBP10", + "SKIC3", + "COL11A2", + "C17orf99", + "ERGIC1", + 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b/p3/regress/Huntingtons_Disease/significant_genes_condition_Chronic_kidney_disease.json new file mode 100644 index 0000000000000000000000000000000000000000..6e00726520c1e6d521b25720c4d7d6ef814576f6 --- /dev/null +++ b/p3/regress/Huntingtons_Disease/significant_genes_condition_Chronic_kidney_disease.json @@ -0,0 +1,783 @@ +{ + "significant_genes": { + "Variable": [ + "CTAG1A", + "FGF7P6", + "BNIP3L", + "NDUFB11", + "CAST", + "SLC35A3", + "RBM10", + "LMTK3", + "NIPA2", + "NEUROD2", + "ZIC1", + "C15orf40", + "IFITM2", + "MPV17L", + "GABPB1-AS1", + "USP10", + "SOX15", + "FAM187B", + "SART3", + "FBXL2", + "CAV1", + "CCS", + "RTF2", + "ZNF662", + "TTYH1", + "PDCL", + "SKIC3", + "TTI1", + "MARCHF10", + "SELENOM", + "LHCGR", + "PPM1L", + "CCP110", + "IGKV1-37", + "ZNF552", + "CYP2C19", + "NPEPL1", + "SLC43A2", + "GTPBP10", + "MEA1", + "CUTALP", + "KLHL14", + "COL11A1", + "ABLIM2", + "FHIP1A", + "MGRN1", + "STX18", + "AHCTF1P1", + "IGSF10", + "FAM169A", + "NPY", + "ZNF528", + "STX12", + "KDR", 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b/p3/regress/Huntingtons_Disease/significant_genes_condition_Fibromyalgia.json new file mode 100644 index 0000000000000000000000000000000000000000..1a1f8a4d23beff5ed42b63c75e0f4bebcad45e91 --- /dev/null +++ b/p3/regress/Huntingtons_Disease/significant_genes_condition_Fibromyalgia.json @@ -0,0 +1,750 @@ +{ + "significant_genes": { + "Variable": [ + "CTAG1A", + "FGF7P6", + "NDUFB11", + "CAST", + "BNIP3L", + "SLC35A3", + "RBM10", + "LMTK3", + "C15orf40", + "NEUROD2", + "ZIC1", + "NIPA2", + "IFITM2", + "USP10", + "FBXL2", + "GABPB1-AS1", + "SART3", + "MPV17L", + "SOX15", + "RTF2", + "LHCGR", + "SKIC3", + "FAM187B", + "CCS", + "ZNF662", + "MEA1", + "TTYH1", + "MARCHF10", + "CCP110", + "AHCTF1P1", + "ZNF552", + "ABLIM2", + "PPM1L", + "PDCL", + "CUTALP", + "TTI1", + "KLHL14", + "IGKV1-37", + "STX18", + "CAV1", + "CYP2C19", + "GTPBP10", + "SELENOM", + "SLC43A2", + "NPEPL1", + "FAM169A", + "STX12", + "COL11A1", + "FHIP1A", + "NUP35", + "GXYLT2", + "IGSF10", + "TRMT12", + "NPY", + "LDOC1", + 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0000000000000000000000000000000000000000..d46172980a0e0a4b9310e7a428a78827e47e8eba --- /dev/null +++ b/p3/regress/Huntingtons_Disease/significant_genes_condition_Migraine.json @@ -0,0 +1,762 @@ +{ + "significant_genes": { + "Variable": [ + "CTAG1A", + "FGF7P6", + "BNIP3L", + "NDUFB11", + "CAST", + "RBM10", + "SLC35A3", + "IFITM2", + "LMTK3", + "ZIC1", + "NEUROD2", + "USP10", + "C15orf40", + "ZNF662", + "FBXL2", + "CCS", + "FAM187B", + "GABPB1-AS1", + "PPM1L", + "CAV1", + "TTYH1", + "SOX15", + "NIPA2", + "SART3", + "LHCGR", + "FHIP1A", + "MEA1", + "RTF2", + "MPV17L", + "CCP110", + "KLHL14", + "NPEPL1", + "SKIC3", + "MARCHF10", + "PDCL", + "ABLIM2", + "COL11A1", + "PDPR", + "CYP2C19", + "IGKV1-37", + "TTI1", + "ZNF528", + "MSTO2P", + "ZNF552", + "AHCTF1P1", + "LAMP3", + "ALKBH4", + "STX18", + "SELENOM", + "LDOC1", + "CUTALP", + "FAM169A", + "TRMT12", + "KCNJ1", + "PPP1R10", + "PYGB", + "SRSF5", + "MLNR", + "RCOR1", + "EIF4A2", + "ERGIC1", + "CCR7", + "SFRP5", + "ZNF281", + "COL11A2", + 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-0,0 +1,771 @@ +{ + "significant_genes": { + "Variable": [ + "CTAG1A", + "FGF7P6", + "NDUFB11", + "BNIP3L", + "CAST", + "LMTK3", + "SLC35A3", + "GABPB1-AS1", + "FAM187B", + "IFITM2", + "RBM10", + "ZIC1", + "NEUROD2", + "IGKV1-37", + "CCS", + "CAV1", + "FBXL2", + "MPV17L", + "SELENOM", + "SART3", + "TTI1", + "NPEPL1", + "RTF2", + "PPM1L", + "SKIC3", + "SLC43A2", + "SOX15", + "C15orf40", + "USP10", + "TTYH1", + "NIPA2", + "ABLIM2", + "CUTALP", + "PDCL", + "GXYLT2", + "MIR4691", + "KLHL14", + "MGRN1", + "MARCHF10", + "COL11A1", + "MSTO2P", + "STX18", + "ZNF662", + "IGSF10", + "CYP2C19", + "TRMT12", + "LHCGR", + "CCR7", + "GTPBP10", + "ERGIC1", + "AHCTF1P1", + "ZNF528", + "PTPN1", + "ZNF843", + "ZNF552", + "PPP5D1P", + "LDOC1", + "FAM161A", + "NUP35", + "GNG5", + "FCER1G", + "PDZD9", + "LEMD2", + "EIF4A2", + "SFRP5", + "MAB21L3", + "TLL1", + "FBXO28", + "RN7SKP150", + "RAB40C", + "HHLA2", + "GDA", + "OMA1", + "FHIP1A", + "MLNR", + "FAM169A", + "AURKC", + "CAPN11", + "ALKBH4", + "SFTA3", + 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b/p3/regress/Huntingtons_Disease/significant_genes_condition_Obsessive-Compulsive_Disorder.json @@ -0,0 +1,765 @@ +{ + "significant_genes": { + "Variable": [ + "BNIP3L", + "FGF7P6", + "CAST", + "CTAG1A", + "RBM10", + "NDUFB11", + "SLC35A3", + "NIPA2", + "ZNF528", + "LMTK3", + "GABPB1-AS1", + "AHCTF1P1", + "FBXL2", + "SOX15", + "C15orf40", + "IFITM2", + "METTL25B", + "USP10", + "ZNF662", + "FAM187B", + "MPV17L", + "LDOC1", + "RNF13", + "ZNF552", + "HSD11B2", + "SKIC3", + "MARCHF10", + "SART3", + "CAV1", + "IGKV1-37", + "NPY", + "NEUROD2", + "RDH11", + "TENM4", + "PTPN1", + "PPM1L", + "COL11A1", + "KCNJ1", + "NCBP2AS2", + "FHIP1A", + "ABLIM2", + "OMA1", + "PHYH", + "CCS", + "ZIC1", + "PPP1R10", + "PYCR3", + "CEP290", + "SCARF1", + "CGNL1", + "PITPNB", + "L2HGDH", + "NEUROD1", + "PGAP6", + "MSRA", + "HARBI1", + "GNG5", + "HHLA2", + "SPAG8", + "MEA1", + "SFRP5", + "LAMP3", + "MIR4691", + "MIR21", + "TTYH1", + "B3GNT3", + "IGSF10", + "RCOR1", + "TYMP", + "KLHL14", + "OR2L2", + "MTMR10", + 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a/p3/regress/Huntingtons_Disease/significant_genes_condition_Polycystic_Ovary_Syndrome.json b/p3/regress/Huntingtons_Disease/significant_genes_condition_Polycystic_Ovary_Syndrome.json new file mode 100644 index 0000000000000000000000000000000000000000..9d8b4ebf542f83a14be3ef17075f1d3938b82fab --- /dev/null +++ b/p3/regress/Huntingtons_Disease/significant_genes_condition_Polycystic_Ovary_Syndrome.json @@ -0,0 +1,774 @@ +{ + "significant_genes": { + "Variable": [ + "CTAG1A", + "BNIP3L", + "CAST", + "NDUFB11", + "FGF7P6", + "SART3", + "IFITM2", + "ZIC1", + "SLC35A3", + "RBM10", + "GABPB1-AS1", + "NEUROD2", + "RTF2", + "CCS", + "NIPA2", + "CYP2C19", + "NPEPL1", + "FAM187B", + "STX18", + "PPP1R10", + "MPV17L", + "PPM1L", + "ZUP1", + "CHP1", + "SOX15", + "ZNF662", + "SKIC3", + "CCP110", + "LMTK3", + "ZNF528", + "G3BP1", + "TPTE", + "UPK2", + "MEA1", + "SELENOM", + "KLHL14", + "TRIM48", + "RAB40C", + "FHIP1A", + "NEUROD1", + "TMEM40", + "NPY", + "MLNR", + "C17orf99", + "MGRN1", + "STX12", + 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of file diff --git a/p3/regress/Huntingtons_Disease/significant_genes_condition_Post-Traumatic_Stress_Disorder.json b/p3/regress/Huntingtons_Disease/significant_genes_condition_Post-Traumatic_Stress_Disorder.json new file mode 100644 index 0000000000000000000000000000000000000000..4ac12b4b885a88b51f268c06de16b53adf5ae06c --- /dev/null +++ b/p3/regress/Huntingtons_Disease/significant_genes_condition_Post-Traumatic_Stress_Disorder.json @@ -0,0 +1,774 @@ +{ + "significant_genes": { + "Variable": [ + "CTAG1A", + "FGF7P6", + "NDUFB11", + "RBM10", + "SLC35A3", + "BNIP3L", + "CAST", + "LMTK3", + "FBXL2", + "SKIC3", + "ZIC1", + "C15orf40", + "CAV1", + "FHIP1A", + "MARCHF10", + "TTYH1", + "IGKV1-37", + "SOX15", + "GABPB1-AS1", + "ZNF662", + "MPV17L", + "TTI1", + "USP10", + "FAM187B", + "SART3", + "SFRP5", + "NEUROD2", + "ZNF528", + "PPM1L", + "ABLIM2", + "COL11A1", + "NIPA2", + "ZNF552", + "RTF2", + "PDCL", + "KLHL14", + "FAM169A", + "CSTF1", + "FIGN", + "LHCGR", + "CHP1", + "CCS", + "IFITM2", 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a/p3/regress/Huntingtons_Disease/significant_genes_condition_Psoriasis.json b/p3/regress/Huntingtons_Disease/significant_genes_condition_Psoriasis.json new file mode 100644 index 0000000000000000000000000000000000000000..047df56e47c8f36ea0fe265ed139ec5710e20ec2 --- /dev/null +++ b/p3/regress/Huntingtons_Disease/significant_genes_condition_Psoriasis.json @@ -0,0 +1,801 @@ +{ + "significant_genes": { + "Variable": [ + "CTAG1A", + "FGF7P6", + "NDUFB11", + "BNIP3L", + "CAST", + "SLC35A3", + "RBM10", + "LMTK3", + "C15orf40", + "ZIC1", + "NIPA2", + "IFITM2", + "FBXL2", + "NEUROD2", + "USP10", + "SOX15", + "GABPB1-AS1", + "MPV17L", + "ZNF662", + "SART3", + "FAM187B", + "SKIC3", + "RTF2", + "CAV1", + "CCS", + "MARCHF10", + "IGKV1-37", + "TTI1", + "ABLIM2", + "PDCL", + "SELENOM", + "ZNF552", + "TTYH1", + "LHCGR", + "SLC43A2", + "FAM169A", + "PPM1L", + "FHIP1A", + "COL11A1", + "AHCTF1P1", + "CYP2C19", + "KLHL14", + "CCP110", + "MEA1", + "GTPBP10", + "STX18", + "NPEPL1", + "CUTALP", + "IGSF10", + 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a/p3/regress/Hypertrophic_Cardiomyopathy/significant_genes_condition_None.json b/p3/regress/Hypertrophic_Cardiomyopathy/significant_genes_condition_None.json new file mode 100644 index 0000000000000000000000000000000000000000..59f56d3eb9380e74653b5f71c9681ad3c5be0494 --- /dev/null +++ b/p3/regress/Hypertrophic_Cardiomyopathy/significant_genes_condition_None.json @@ -0,0 +1,75 @@ +{ + "significant_genes": { + "Variable": [ + "RASD1", + "TUBA3E", + "MYH6", + "CDC42EP4", + "DYRK1B", + "SERPINA3", + "PRKCD", + "CSRNP1", + "IRX2", + "CEBPD", + "TUBB4B", + "FCN3", + "JAK2", + "DDIT3", + "ZFP36", + "ASPSCR1", + "INPP1" + ], + "Coefficient": [ + -0.08014765059481216, + -0.0629090585433587, + -0.056123832342726505, + -0.0375259758330382, + 0.022742674725526872, + -0.016302458981246905, + -0.013163060516940106, + -0.011748221429155058, + 0.01034042051071182, + -0.010095829601975841, + -0.007301643534945973, + -0.0047873654564035365, + 0.003560939239152298, + 0.0031807640479369487, + 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a/p3/regress/Hypothyroidism/significant_genes_condition_Age.json b/p3/regress/Hypothyroidism/significant_genes_condition_Age.json new file mode 100644 index 0000000000000000000000000000000000000000..ebf43ad71d543b0efa7247b1249e18b645fecbaa --- /dev/null +++ b/p3/regress/Hypothyroidism/significant_genes_condition_Age.json @@ -0,0 +1,1116 @@ +{ + "significant_genes": { + "Variable": [ + "CTSG", + "IGFALS", + "DSC1", + "BFAR", + "HSFY2", + "CD200R1L", + "FAM3B", + "OR10A3", + "FLJ13224", + "HOTAIR", + "LILRB5", + "FBLL1", + "ANO7", + "FNDC7", + "GRXCR2", + "CDHR2", + "CD300LD-AS1", + "VNN3P", + "MS4A10", + "KC6", + "FRMPD2B", + "UNCX", + "NLRP10", + "PDHA2", + "IL23R", + "SNORA11B", + "TFDP3", + "ACOXL", + "OR2W1", + "ZNG1F", + "LINC00469", + "KIR3DL1", + "PAX4", + "NEUROD2", + "AGMO", + "C1QTNF9B", + "TUBBP5", + "POU5F2", + "DPF1", + "LIPK", + "KRTAP10-10", + "GAB4", + "GSC", + "SYT10", + "MCM10", + "GDNF", + "OR1D4", + "CYTL1", + "LRRC8E", + "OR4P4", + "OR52H1", + "LGALS7B", + "PIGZ", + 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b/p3/regress/Hypothyroidism/significant_genes_condition_Gender.json @@ -0,0 +1,2226 @@ +{ + "significant_genes": { + "Variable": [ + "CTSG", + "BFAR", + "IGFALS", + "HSFY2", + "FAM3B", + "DSC1", + "CD200R1L", + "FNDC7", + "CDHR2", + "GRXCR2", + "DDX20", + "OR10A3", + "C1QTNF9B", + "LILRB5", + "CD300LD-AS1", + "ACOXL", + "HOTAIR", + "CRYGD", + "VNN3P", + "KC6", + "IFNLR1", + "EIF3H", + "PI4KAP1", + "MCM10", + "FLJ13224", + "CLEC4GP1", + "ANO7", + "TFDP3", + "CEPT1", + "GMPR", + "PKDCC", + "ZNF295-AS1", + "LINC00469", + "CMYA5", + "SNORA11B", + "NLRP10", + "IL23R", + "ANKS4B", + "GOLGA7", + "CHRNA10", + "CFAP100", + "BTF3", + "PDHA2", + "C4BPA", + "MAL", + "ZBTB14", + "TUBBP5", + "DRD5", + "OR52H1", + "GPR137B", + "FBXO40", + "KRTAP10-10", + "DEFB109B", + "GDNF", + "TULP3", + "TRIML1", + "NEUROD2", + "OR1D4", + "OR10R2", + "PIGZ", + "C5orf52", + "PAX4", + "LIPK", + "MRPL3", + "ERCC5", + "FRMPD2B", + "CYP26C1", + "NCKIPSD", + "CEACAM8", + "C10orf95", + "CHRAC1", + "CAGE1", + "SCGB1C1", + 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b/p3/regress/Hypothyroidism/significant_genes_condition_Hypertension.json new file mode 100644 index 0000000000000000000000000000000000000000..daa885d078cc9ba36678c4d36dfba8960e870a99 --- /dev/null +++ b/p3/regress/Hypothyroidism/significant_genes_condition_Hypertension.json @@ -0,0 +1,2250 @@ +{ + "significant_genes": { + "Variable": [ + "CTSG", + "BFAR", + "HSFY2", + "DSC1", + "IGFALS", + "CDHR2", + "CD200R1L", + "TMEM106A", + "CD300LD-AS1", + "VNN3P", + "FAM3B", + "FNDC7", + "ANO7", + "DDX20", + "IFNLR1", + "PI4KAP1", + "HOTAIR", + "LILRB5", + "ZNF295-AS1", + "LGALS7B", + "NLRP10", + "TULP3", + "KC6", + "CRYGD", + "GRXCR2", + "IL23R", + "GDNF", + "PDHA2", + "C1QTNF9B", + "OTOA", + "GPA33", + "SNORA11B", + "CYTL1", + "MCM10", + "TUBBP5", + "PKDCC", + "NEUROD2", + "ASAH2", + "ACOXL", + "MS4A10", + "KCNH4", + "EMC2", + "EME1", + "ONECUT1", + "MCCD1", + "KRTAP10-10", + "TFDP3", + "STH", + "ANKS4B", + "OR2W1", + "LINC00469", + "GALNT8", + "LOC344967", + "LIPK", + "CYP4Z2P", + "SPINT3", + 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"significant_genes": { + "Variable": [ + "DSC1", + "SLC17A8", + "LILRB5", + "BTBD16", + "ONECUT1", + "CDHR2", + "HSFY2", + "CTSG", + "FNDC7", + "RSL1D1", + "LCE3E", + "ACTC1", + "ADPRM", + "OR6F1", + "ANKS4B", + "HSD3B1", + "GASK1A", + "CFAP100", + "OR10A3", + "CLEC4GP1", + "CD200R1L", + "OR52H1", + "TBX20", + "MGC12916", + "SNORA11B", + "FAM3B", + "HOTAIR", + "MS4A10", + "SNORA56", + "TAS2R43", + "SCN2A", + "LIPK", + "XKR8", + "OR5M1", + "DKKL1", + "IGFALS", + "PIGZ", + "PLIN4", + "FBXO40", + "SPATA1", + "DNAAF6", + "NEUROD2", + "CRISP2", + "SPINT4", + "NPHS2", + "FLJ13224", + "OR56A3", + "IL23R", + "SLC5A11", + "C1QTNF9B", + "OR2W1", + "LINC00159", + "KCNQ5", + "TFDP3", + "DPP10", + "CEACAM8", + "ARSD", + "OR2M4", + "CRYGD", + "LCE5A", + "SLFN13", + "LOC154449", + "KRTAP10-10", + "KCNE5", + "KIR3DL1", + "DPF1", + "GOT1L1", + "DLX6", + "TUBBP5", + "PDHA2", + "GDNF", + "POU3F3", + "FAM9A", + "OPN5", + "DEFA5", + "MEAK7", + "OR10G4", + "CAMKV", + "KC6", + "KCNH1", + "OR4P4", + "OR2T3", 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a/p3/regress/Insomnia/significant_genes_condition_Bipolar_disorder.json b/p3/regress/Insomnia/significant_genes_condition_Bipolar_disorder.json new file mode 100644 index 0000000000000000000000000000000000000000..dcac66bac081295b67238fe82f9c1bdeeb1589ec --- /dev/null +++ b/p3/regress/Insomnia/significant_genes_condition_Bipolar_disorder.json @@ -0,0 +1,144 @@ +{ + "significant_genes": { + "Variable": [ + "NXT2", + "ELOVL5", + "SCAF4", + "SBDS", + "CORO7", + "ARMC1", + "AGO2", + "BBX", + "ACTRT1", + "KLHL7", + "CHRNA2", + "KCNH8", + "HAUS2", + "IL17RD", + "HDAC7", + "KIF16B", + "TMEM64", + "SLC38A1", + "FKBP8", + "THOC2", + "CERS2", + "CFHR2", + "PLD2", + "CYGB", + "UFL1", + "DNAJC10", + "GALNS", + "GSTTP2", + "SAMD1", + "DNAJC1", + "EPM2A", + "ZNF713", + "SCAND2P", + "BRD3", + "MAGEA6", + "GET1", + "BAGE5", + "UGT2B11", + "TEKT2", + "SF1" + ], + "Coefficient": [ + 0.052425161819338026, + 0.046847562527692246, + 0.0369012079745609, + 0.03651881486390792, + 0.028824375158265768, + 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"precision": 0.625, + "recall": 0.1834862385321101, + "f1": 0.28368794326241137, + "jaccard": 0.14285714285714285 + } + } +} \ No newline at end of file diff --git a/p3/regress/Insomnia/significant_genes_condition_Fibromyalgia.json b/p3/regress/Insomnia/significant_genes_condition_Fibromyalgia.json new file mode 100644 index 0000000000000000000000000000000000000000..87f363cd8187cf252e2d1150976260521e9ab6e4 --- /dev/null +++ b/p3/regress/Insomnia/significant_genes_condition_Fibromyalgia.json @@ -0,0 +1,501 @@ +{ + "significant_genes": { + "Variable": [ + "A1BG-AS1", + "A4GALT", + "CCDC140", + "AAK1", + "A2ML1", + "ABCG4", + "ANXA3", + "RNF144B", + "ACSM4", + "DHCR24", + "ACAT1", + "AQP10", + "BPI", + "CBLN3", + "ADAMTS8", + "ABO", + "LOC100133077", + "AICDA", + "A1CF", + "C18orf63", + "ADAM20", + "ACSS1", + "ACTRT1", + "CD300E", + "BTN3A2", + "SNORD114-3", + "A3GALT2", + "CCDC149", + "ABCD3", + "DHRS7B", + "A2M", + "DCDC2B", + "MIR374A", + "IL17A", + "ACP6", + "MIR124-2", + "MKS1", + 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