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- p3/regress/Atrial_Fibrillation/significant_genes_condition_Arrhythmia.json +834 -0
- p3/regress/Atrial_Fibrillation/significant_genes_condition_Bipolar_disorder.json +258 -0
- p3/regress/Atrial_Fibrillation/significant_genes_condition_Breast_Cancer.json +261 -0
- p3/regress/Atrial_Fibrillation/significant_genes_condition_COVID-19.json +795 -0
- p3/regress/Atrial_Fibrillation/significant_genes_condition_Cardiovascular_Disease.json +849 -0
- p3/regress/Atrial_Fibrillation/significant_genes_condition_Chronic_kidney_disease.json +273 -0
- p3/regress/Atrial_Fibrillation/significant_genes_condition_Chronic_obstructive_pulmonary_disease_(COPD).json +252 -0
- p3/regress/Atrial_Fibrillation/significant_genes_condition_Coronary_artery_disease.json +840 -0
- p3/regress/Autism_spectrum_disorder_(ASD)/significant_genes_condition_Obesity.json +0 -0
- p3/regress/Bile_Duct_Cancer/significant_genes_condition_Age.json +75 -0
- p3/regress/Bile_Duct_Cancer/significant_genes_condition_Gender.json +75 -0
- p3/regress/Bile_Duct_Cancer/significant_genes_condition_Hypertension.json +30 -0
- p3/regress/Bile_Duct_Cancer/significant_genes_condition_None.json +30 -0
- p3/regress/Bile_Duct_Cancer/significant_genes_condition_Obesity.json +30 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Age.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Anorexia_Nervosa.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Atrial_Fibrillation.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Breast_Cancer.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_COVID-19.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Cardiovascular_Disease.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Chronic_kidney_disease.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Chronic_obstructive_pulmonary_disease_(COPD).json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Coronary_artery_disease.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Gender.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Huntingtons_Disease.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Hypertension.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Insomnia.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Liver_Cancer.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Liver_cirrhosis.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Migraine.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_None.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Obesity.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Obsessive-Compulsive_Disorder.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Obstructive_sleep_apnea.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Osteoarthritis.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Polycystic_Ovary_Syndrome.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Post-Traumatic_Stress_Disorder.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Prostate_Cancer.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Psoriasis.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Schizophrenia.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Stroke.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Type_1_Diabetes.json +0 -0
- p3/regress/Bipolar_disorder/significant_genes_condition_Type_2_Diabetes.json +0 -0
- p3/regress/Bladder_Cancer/significant_genes_condition_Age.json +0 -0
- p3/regress/Bladder_Cancer/significant_genes_condition_Gender.json +0 -0
- p3/regress/Bladder_Cancer/significant_genes_condition_Hypertension.json +0 -0
- p3/regress/Bladder_Cancer/significant_genes_condition_None.json +0 -0
- p3/regress/Bladder_Cancer/significant_genes_condition_Obesity.json +0 -0
- p3/regress/Breast_Cancer/significant_genes_condition_Age.json +0 -0
- p3/regress/Breast_Cancer/significant_genes_condition_Atrial_Fibrillation.json +0 -0
p3/regress/Atrial_Fibrillation/significant_genes_condition_Arrhythmia.json
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|
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|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"HPN",
|
| 5 |
+
"A2M",
|
| 6 |
+
"ABCA6",
|
| 7 |
+
"ACSM3",
|
| 8 |
+
"CIB4",
|
| 9 |
+
"ARHGAP44",
|
| 10 |
+
"ACSM4",
|
| 11 |
+
"CD207",
|
| 12 |
+
"AFP",
|
| 13 |
+
"DNAH10",
|
| 14 |
+
"ARSF",
|
| 15 |
+
"ANKRD53",
|
| 16 |
+
"ARRDC1-AS1",
|
| 17 |
+
"BTBD19",
|
| 18 |
+
"ACE",
|
| 19 |
+
"ACER3",
|
| 20 |
+
"GGT7",
|
| 21 |
+
"ADRA2C",
|
| 22 |
+
"KCTD9",
|
| 23 |
+
"ADGRF1",
|
| 24 |
+
"BICDL1",
|
| 25 |
+
"ASCL1",
|
| 26 |
+
"ARMH4",
|
| 27 |
+
"GRM8",
|
| 28 |
+
"BIRC7",
|
| 29 |
+
"CRYZL1",
|
| 30 |
+
"EFNA4",
|
| 31 |
+
"CADPS",
|
| 32 |
+
"ERG",
|
| 33 |
+
"FAM218A",
|
| 34 |
+
"COA7",
|
| 35 |
+
"GLI1",
|
| 36 |
+
"TTTY7",
|
| 37 |
+
"CAMK1D",
|
| 38 |
+
"AP2B1",
|
| 39 |
+
"ADAMTS2",
|
| 40 |
+
"NTNG1",
|
| 41 |
+
"BPIFA1",
|
| 42 |
+
"SPMIP7",
|
| 43 |
+
"C6orf163",
|
| 44 |
+
"CPZ",
|
| 45 |
+
"SLC29A4",
|
| 46 |
+
"APOA1",
|
| 47 |
+
"TBX1",
|
| 48 |
+
"TNNT1",
|
| 49 |
+
"LRTM2",
|
| 50 |
+
"ERCC6L2",
|
| 51 |
+
"MIR155HG",
|
| 52 |
+
"ACTC1",
|
| 53 |
+
"CHURC1",
|
| 54 |
+
"DHCR24",
|
| 55 |
+
"GAA",
|
| 56 |
+
"ART1",
|
| 57 |
+
"C11orf98",
|
| 58 |
+
"IPP",
|
| 59 |
+
"CDCA3",
|
| 60 |
+
"ITPA",
|
| 61 |
+
"MAP2K2",
|
| 62 |
+
"CX3CL1",
|
| 63 |
+
"ACTRT2",
|
| 64 |
+
"BARHL2",
|
| 65 |
+
"ARAP1",
|
| 66 |
+
"EFEMP1",
|
| 67 |
+
"DEFB103A",
|
| 68 |
+
"PRDM12",
|
| 69 |
+
"ANKRD26P1",
|
| 70 |
+
"CYP2C19",
|
| 71 |
+
"BRD7P3",
|
| 72 |
+
"TRPV3",
|
| 73 |
+
"AMFR",
|
| 74 |
+
"SLC25A33",
|
| 75 |
+
"BIN2",
|
| 76 |
+
"C1QTNF2",
|
| 77 |
+
"ANKRD20A1",
|
| 78 |
+
"CHRND",
|
| 79 |
+
"BSX",
|
| 80 |
+
"PRSS55",
|
| 81 |
+
"ARHGEF12",
|
| 82 |
+
"DBH",
|
| 83 |
+
"TSSK1B",
|
| 84 |
+
"ATP11AUN",
|
| 85 |
+
"MRAP",
|
| 86 |
+
"CAPN11",
|
| 87 |
+
"AP1S3",
|
| 88 |
+
"BMP7",
|
| 89 |
+
"OR5H6",
|
| 90 |
+
"ZXDA",
|
| 91 |
+
"HLA-DPB2",
|
| 92 |
+
"ALOX15",
|
| 93 |
+
"NPBWR2",
|
| 94 |
+
"LAPTM5",
|
| 95 |
+
"IL2",
|
| 96 |
+
"FMOD",
|
| 97 |
+
"KRTAP4-5",
|
| 98 |
+
"ANXA2",
|
| 99 |
+
"ASB9",
|
| 100 |
+
"FAM118B",
|
| 101 |
+
"DOCK6",
|
| 102 |
+
"C6orf58",
|
| 103 |
+
"OTOP3",
|
| 104 |
+
"IMMP1L",
|
| 105 |
+
"GSDMA",
|
| 106 |
+
"MARK1",
|
| 107 |
+
"CAMK2N2",
|
| 108 |
+
"VIPR2",
|
| 109 |
+
"ALDH1A2",
|
| 110 |
+
"CNOT9",
|
| 111 |
+
"MYOCD",
|
| 112 |
+
"COPG2IT1",
|
| 113 |
+
"FREM1",
|
| 114 |
+
"NAXD",
|
| 115 |
+
"MKX",
|
| 116 |
+
"C8orf48",
|
| 117 |
+
"CHST7",
|
| 118 |
+
"ARMCX2",
|
| 119 |
+
"OR4E2",
|
| 120 |
+
"CD109",
|
| 121 |
+
"EMP1",
|
| 122 |
+
"CFAP69",
|
| 123 |
+
"PTPN20",
|
| 124 |
+
"ALG1L1P",
|
| 125 |
+
"H1-2",
|
| 126 |
+
"ZNF28",
|
| 127 |
+
"ANKRD63",
|
| 128 |
+
"ADGRG7",
|
| 129 |
+
"EFNB3",
|
| 130 |
+
"CCDC34",
|
| 131 |
+
"PSD2",
|
| 132 |
+
"CAMKK2",
|
| 133 |
+
"APOB",
|
| 134 |
+
"ZFP69",
|
| 135 |
+
"ANKIB1",
|
| 136 |
+
"ACSBG2",
|
| 137 |
+
"CENPX",
|
| 138 |
+
"CST1",
|
| 139 |
+
"PEX12",
|
| 140 |
+
"BMPR2",
|
| 141 |
+
"DHX57",
|
| 142 |
+
"NIPA1",
|
| 143 |
+
"ADAM6",
|
| 144 |
+
"PRR19",
|
| 145 |
+
"FAM3D",
|
| 146 |
+
"HOXD4",
|
| 147 |
+
"BTBD3",
|
| 148 |
+
"CHD7",
|
| 149 |
+
"LRRC72",
|
| 150 |
+
"SYCE1",
|
| 151 |
+
"DTNBP1",
|
| 152 |
+
"FBXL21P",
|
| 153 |
+
"XKRX",
|
| 154 |
+
"ACO1",
|
| 155 |
+
"TTC39A",
|
| 156 |
+
"CENPS-CORT",
|
| 157 |
+
"NTPCR",
|
| 158 |
+
"C12orf60",
|
| 159 |
+
"ATRNL1",
|
| 160 |
+
"AHCY",
|
| 161 |
+
"TPTE2P3",
|
| 162 |
+
"BTBD16",
|
| 163 |
+
"MT1IP",
|
| 164 |
+
"ACOXL",
|
| 165 |
+
"RPF1",
|
| 166 |
+
"HUS1",
|
| 167 |
+
"CADM2",
|
| 168 |
+
"TSPY26P",
|
| 169 |
+
"KLHL4",
|
| 170 |
+
"ACVR1C",
|
| 171 |
+
"EVA1B",
|
| 172 |
+
"MTRNR2L3",
|
| 173 |
+
"OR4F4",
|
| 174 |
+
"IRF5",
|
| 175 |
+
"LRRC8D",
|
| 176 |
+
"ALAD",
|
| 177 |
+
"CCDC120",
|
| 178 |
+
"CPEB1",
|
| 179 |
+
"ORC1",
|
| 180 |
+
"AQP8",
|
| 181 |
+
"KCNA2",
|
| 182 |
+
"CHI3L1",
|
| 183 |
+
"TAF7L",
|
| 184 |
+
"CDON",
|
| 185 |
+
"POU6F2",
|
| 186 |
+
"FUT2",
|
| 187 |
+
"CYSLTR2",
|
| 188 |
+
"ARID5A",
|
| 189 |
+
"DSPP",
|
| 190 |
+
"APOBEC4",
|
| 191 |
+
"ZFTA",
|
| 192 |
+
"MCPH1",
|
| 193 |
+
"SP6",
|
| 194 |
+
"TRPA1",
|
| 195 |
+
"C1orf105",
|
| 196 |
+
"OR10A2",
|
| 197 |
+
"SPIDR",
|
| 198 |
+
"PCDHGC3",
|
| 199 |
+
"ZNF175",
|
| 200 |
+
"DEFA6",
|
| 201 |
+
"AGBL1",
|
| 202 |
+
"HOXD10",
|
| 203 |
+
"AP1AR",
|
| 204 |
+
"ANKRD26P3",
|
| 205 |
+
"ZNF347",
|
| 206 |
+
"GPX2",
|
| 207 |
+
"RBMX",
|
| 208 |
+
"CHRNB4",
|
| 209 |
+
"C1QTNF3",
|
| 210 |
+
"CSKMT",
|
| 211 |
+
"CHN2",
|
| 212 |
+
"PPP1R17",
|
| 213 |
+
"PAX8",
|
| 214 |
+
"SNX12",
|
| 215 |
+
"MRS2P2",
|
| 216 |
+
"DCLK1",
|
| 217 |
+
"PTGS2",
|
| 218 |
+
"KBTBD6",
|
| 219 |
+
"ACSL3",
|
| 220 |
+
"MAPK8IP3",
|
| 221 |
+
"MTRNR2L7",
|
| 222 |
+
"DGKI",
|
| 223 |
+
"PRDM11",
|
| 224 |
+
"ACCS",
|
| 225 |
+
"ADAMTS17",
|
| 226 |
+
"RFTN1",
|
| 227 |
+
"SND1-IT1",
|
| 228 |
+
"AICDA",
|
| 229 |
+
"PRR29",
|
| 230 |
+
"MARK2P9",
|
| 231 |
+
"CLEC18C",
|
| 232 |
+
"HLA-DRB4",
|
| 233 |
+
"B4GALT1",
|
| 234 |
+
"FABP5",
|
| 235 |
+
"EIF4E1B",
|
| 236 |
+
"ALOX12P2",
|
| 237 |
+
"GPALPP1",
|
| 238 |
+
"ZNF229",
|
| 239 |
+
"RIMKLA",
|
| 240 |
+
"S100G",
|
| 241 |
+
"TRIM44",
|
| 242 |
+
"NWD2",
|
| 243 |
+
"OR4N2",
|
| 244 |
+
"CSMD1",
|
| 245 |
+
"OR2B2",
|
| 246 |
+
"SATL1",
|
| 247 |
+
"KLHL15",
|
| 248 |
+
"BEST1",
|
| 249 |
+
"DISC2",
|
| 250 |
+
"ARL2BPP2",
|
| 251 |
+
"PODN",
|
| 252 |
+
"APOL5",
|
| 253 |
+
"TENM2",
|
| 254 |
+
"ZNF804A",
|
| 255 |
+
"CLLU1-AS1",
|
| 256 |
+
"HIPK4",
|
| 257 |
+
"FAM234B",
|
| 258 |
+
"C15orf32",
|
| 259 |
+
"BAAT",
|
| 260 |
+
"STYXL1",
|
| 261 |
+
"LINC02694",
|
| 262 |
+
"NREP",
|
| 263 |
+
"ICAM4",
|
| 264 |
+
"GNRHR",
|
| 265 |
+
"AHCTF1",
|
| 266 |
+
"CTLA4",
|
| 267 |
+
"NKAPD1",
|
| 268 |
+
"GPHA2",
|
| 269 |
+
"UCHL1",
|
| 270 |
+
"SFTPB",
|
| 271 |
+
"AMOTL2",
|
| 272 |
+
"GNA13",
|
| 273 |
+
"CMAS"
|
| 274 |
+
],
|
| 275 |
+
"Coefficient": [
|
| 276 |
+
0.04845990011777895,
|
| 277 |
+
0.042453052198154366,
|
| 278 |
+
0.04005355188261133,
|
| 279 |
+
0.036342232277266566,
|
| 280 |
+
0.033026493511827286,
|
| 281 |
+
0.028001590906563123,
|
| 282 |
+
-0.027940902936144776,
|
| 283 |
+
0.02630313287364111,
|
| 284 |
+
0.02629482394813656,
|
| 285 |
+
0.025497558845298578,
|
| 286 |
+
0.024221588861653615,
|
| 287 |
+
0.02399685273519421,
|
| 288 |
+
0.023950916228335024,
|
| 289 |
+
0.02389319182557672,
|
| 290 |
+
0.021462365372145267,
|
| 291 |
+
0.02113689358729027,
|
| 292 |
+
0.01992226436625464,
|
| 293 |
+
0.01914089875555235,
|
| 294 |
+
-0.01901523532865079,
|
| 295 |
+
0.01883959403732898,
|
| 296 |
+
0.018519003523413038,
|
| 297 |
+
-0.01793428692197213,
|
| 298 |
+
0.017929118655314175,
|
| 299 |
+
0.016759026420268157,
|
| 300 |
+
-0.015866788880262984,
|
| 301 |
+
-0.015686909096563804,
|
| 302 |
+
0.014894061635875108,
|
| 303 |
+
0.014609167413286293,
|
| 304 |
+
0.013910758753724009,
|
| 305 |
+
0.01375018265655475,
|
| 306 |
+
0.013230579688468153,
|
| 307 |
+
0.012321987125923653,
|
| 308 |
+
0.011903484671895885,
|
| 309 |
+
0.011730052502082559,
|
| 310 |
+
-0.010834943721993435,
|
| 311 |
+
0.010717889688299778,
|
| 312 |
+
0.01052815844456874,
|
| 313 |
+
0.010494112215961538,
|
| 314 |
+
0.010115884697650407,
|
| 315 |
+
0.0100168730150914,
|
| 316 |
+
0.00999638905828048,
|
| 317 |
+
0.009868280049290006,
|
| 318 |
+
0.009756879921741212,
|
| 319 |
+
0.00950027671970846,
|
| 320 |
+
0.009073114612848746,
|
| 321 |
+
0.008589180933564861,
|
| 322 |
+
-0.008455375808119574,
|
| 323 |
+
0.008301441960327099,
|
| 324 |
+
0.008117107070898534,
|
| 325 |
+
0.007838018822489003,
|
| 326 |
+
0.0078020063393004335,
|
| 327 |
+
-0.007719481654329846,
|
| 328 |
+
0.00771504313633864,
|
| 329 |
+
0.0076665388293643685,
|
| 330 |
+
-0.007523130759144138,
|
| 331 |
+
0.007450438599003916,
|
| 332 |
+
-0.007392083752956514,
|
| 333 |
+
-0.007181329277842227,
|
| 334 |
+
0.007160529672689976,
|
| 335 |
+
-0.006828916063847044,
|
| 336 |
+
0.006735536833009996,
|
| 337 |
+
-0.006649810633387977,
|
| 338 |
+
0.006626493978506524,
|
| 339 |
+
-0.006529868415083532,
|
| 340 |
+
-0.006483697497408372,
|
| 341 |
+
-0.006306350580904308,
|
| 342 |
+
-0.00626218321308285,
|
| 343 |
+
0.006246181306500755,
|
| 344 |
+
-0.006109500529670705,
|
| 345 |
+
0.005929255783072141,
|
| 346 |
+
-0.005725401092946468,
|
| 347 |
+
-0.005666101167922246,
|
| 348 |
+
-0.005663229191574651,
|
| 349 |
+
-0.005419878185711376,
|
| 350 |
+
-0.005208129706090233,
|
| 351 |
+
0.005116570964061603,
|
| 352 |
+
0.004998136369572758,
|
| 353 |
+
0.004986522813597698,
|
| 354 |
+
0.0048234799836410465,
|
| 355 |
+
0.004704250613418841,
|
| 356 |
+
-0.004697270000044125,
|
| 357 |
+
0.00461663334254968,
|
| 358 |
+
0.004569489102139356,
|
| 359 |
+
0.004464857305990685,
|
| 360 |
+
0.004178666644153982,
|
| 361 |
+
-0.0041611712389284594,
|
| 362 |
+
-0.0041159024743632885,
|
| 363 |
+
0.004066402008028552,
|
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6.050154245486749e-08
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],
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"Absolute Coefficient": [
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0.04845990011777895,
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| 549 |
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0.042453052198154366,
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| 820 |
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|
| 821 |
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"prediction": {
|
| 822 |
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"accuracy": 82.6086956521739,
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| 823 |
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| 833 |
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| 834 |
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}
|
p3/regress/Atrial_Fibrillation/significant_genes_condition_Bipolar_disorder.json
ADDED
|
@@ -0,0 +1,258 @@
|
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|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
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"Variable": [
|
| 4 |
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"GGT7",
|
| 5 |
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"HPN",
|
| 6 |
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"SFTPB",
|
| 7 |
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"MIR155HG",
|
| 8 |
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|
| 9 |
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|
| 10 |
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| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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| 17 |
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|
| 18 |
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|
| 19 |
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|
| 20 |
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|
| 21 |
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| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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"TSSK1B",
|
| 32 |
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|
| 33 |
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"FLT1",
|
| 34 |
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"SLC25A33",
|
| 35 |
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"RBMX",
|
| 36 |
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"IPP",
|
| 37 |
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"CIB4",
|
| 38 |
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"FAM3D",
|
| 39 |
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"FNDC11",
|
| 40 |
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|
| 41 |
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"WTIP",
|
| 42 |
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|
| 43 |
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"CRYBA1",
|
| 44 |
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|
| 45 |
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|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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"OR2T5",
|
| 58 |
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|
| 59 |
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|
| 60 |
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"OTOP3",
|
| 61 |
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"LRRC72",
|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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"FREM1",
|
| 66 |
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"RPL31P11",
|
| 67 |
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|
| 68 |
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|
| 69 |
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"REN",
|
| 70 |
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"TRIP13",
|
| 71 |
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"C11orf98",
|
| 72 |
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"SEMG1",
|
| 73 |
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|
| 74 |
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"TTTY23",
|
| 75 |
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|
| 76 |
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|
| 77 |
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"DOCK6",
|
| 78 |
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|
| 79 |
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"KIF2C",
|
| 80 |
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"OR7G3",
|
| 81 |
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"OR4F4"
|
| 82 |
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],
|
| 83 |
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"Coefficient": [
|
| 84 |
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| 85 |
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]
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},
|
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"cv_performance": {
|
| 245 |
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"prediction": {
|
| 246 |
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"accuracy": 83.47826086956522,
|
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"precision": 26.666666666666664,
|
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"recall": 19.999999999999996,
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},
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"selection": {
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}
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| 257 |
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}
|
| 258 |
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}
|
p3/regress/Atrial_Fibrillation/significant_genes_condition_Breast_Cancer.json
ADDED
|
@@ -0,0 +1,261 @@
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|
| 1 |
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{
|
| 2 |
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"significant_genes": {
|
| 3 |
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"Variable": [
|
| 4 |
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"GGT7",
|
| 5 |
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"MIR155HG",
|
| 6 |
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"HPN",
|
| 7 |
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|
| 8 |
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| 10 |
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|
| 18 |
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| 19 |
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| 20 |
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|
| 21 |
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| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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|
| 31 |
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|
| 32 |
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|
| 33 |
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|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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|
| 44 |
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|
| 45 |
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|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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| 76 |
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|
| 77 |
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|
| 78 |
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| 79 |
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|
| 80 |
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|
| 81 |
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"EVA1B",
|
| 82 |
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"ERO1B"
|
| 83 |
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],
|
| 84 |
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"Coefficient": [
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| 85 |
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| 164 |
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],
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| 165 |
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"Absolute Coefficient": [
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| 166 |
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0.05066593177838637,
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| 167 |
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0.00018138260368937844
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| 245 |
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|
| 246 |
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},
|
| 247 |
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"cv_performance": {
|
| 248 |
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"prediction": {
|
| 249 |
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"accuracy": 82.6086956521739,
|
| 250 |
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"precision": 26.666666666666664,
|
| 251 |
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"recall": 19.999999999999996,
|
| 252 |
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"f1": 18.88888888888889
|
| 253 |
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},
|
| 254 |
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"selection": {
|
| 255 |
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"precision": 2.711790870733787,
|
| 256 |
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"recall": 0.5389221556886229,
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"f1": 0.8983939638908766,
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"jaccard": 0.45132649734310865
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| 259 |
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}
|
| 260 |
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}
|
| 261 |
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}
|
p3/regress/Atrial_Fibrillation/significant_genes_condition_COVID-19.json
ADDED
|
@@ -0,0 +1,795 @@
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"ABCA6",
|
| 5 |
+
"HPN",
|
| 6 |
+
"A2M",
|
| 7 |
+
"ACSM3",
|
| 8 |
+
"CIB4",
|
| 9 |
+
"BTBD19",
|
| 10 |
+
"ACSM4",
|
| 11 |
+
"ARHGAP44",
|
| 12 |
+
"CD207",
|
| 13 |
+
"ARSF",
|
| 14 |
+
"GGT7",
|
| 15 |
+
"AFP",
|
| 16 |
+
"DNAH10",
|
| 17 |
+
"ANKRD53",
|
| 18 |
+
"ACE",
|
| 19 |
+
"ARRDC1-AS1",
|
| 20 |
+
"ADGRF1",
|
| 21 |
+
"EFNA4",
|
| 22 |
+
"GRM8",
|
| 23 |
+
"ARMH4",
|
| 24 |
+
"FAM218A",
|
| 25 |
+
"ADRA2C",
|
| 26 |
+
"GLI1",
|
| 27 |
+
"SPMIP7",
|
| 28 |
+
"BIRC7",
|
| 29 |
+
"CRYZL1",
|
| 30 |
+
"AP2B1",
|
| 31 |
+
"KCTD9",
|
| 32 |
+
"CADPS",
|
| 33 |
+
"CPZ",
|
| 34 |
+
"COA7",
|
| 35 |
+
"BICDL1",
|
| 36 |
+
"ARAP1",
|
| 37 |
+
"ITPA",
|
| 38 |
+
"TBX1",
|
| 39 |
+
"ERG",
|
| 40 |
+
"ADAMTS2",
|
| 41 |
+
"CAMK1D",
|
| 42 |
+
"C6orf163",
|
| 43 |
+
"DHCR24",
|
| 44 |
+
"NTNG1",
|
| 45 |
+
"ASCL1",
|
| 46 |
+
"ACTC1",
|
| 47 |
+
"PRDM12",
|
| 48 |
+
"DBH",
|
| 49 |
+
"ACER3",
|
| 50 |
+
"CHRND",
|
| 51 |
+
"TTTY7",
|
| 52 |
+
"ZXDA",
|
| 53 |
+
"LRTM2",
|
| 54 |
+
"TSSK1B",
|
| 55 |
+
"SLC29A4",
|
| 56 |
+
"TNNT1",
|
| 57 |
+
"ANKRD20A1",
|
| 58 |
+
"EFEMP1",
|
| 59 |
+
"ACTRT2",
|
| 60 |
+
"BIN2",
|
| 61 |
+
"FAM118B",
|
| 62 |
+
"APOA1",
|
| 63 |
+
"CHURC1",
|
| 64 |
+
"MIR155HG",
|
| 65 |
+
"GAA",
|
| 66 |
+
"PRSS55",
|
| 67 |
+
"AMFR",
|
| 68 |
+
"ARHGEF12",
|
| 69 |
+
"CX3CL1",
|
| 70 |
+
"HLA-DPB2",
|
| 71 |
+
"TRPV3",
|
| 72 |
+
"CAPN11",
|
| 73 |
+
"CDCA3",
|
| 74 |
+
"BRD7P3",
|
| 75 |
+
"DEFB103A",
|
| 76 |
+
"AP1S3",
|
| 77 |
+
"IPP",
|
| 78 |
+
"PEX12",
|
| 79 |
+
"CYP2C19",
|
| 80 |
+
"BPIFA1",
|
| 81 |
+
"BSX",
|
| 82 |
+
"ALOX15",
|
| 83 |
+
"ANKRD26P1",
|
| 84 |
+
"MRAP",
|
| 85 |
+
"SLC25A33",
|
| 86 |
+
"KRTAP4-5",
|
| 87 |
+
"AHCTF1",
|
| 88 |
+
"C11orf98",
|
| 89 |
+
"BARHL2",
|
| 90 |
+
"FREM1",
|
| 91 |
+
"PRR19",
|
| 92 |
+
"FOXC2",
|
| 93 |
+
"BMP7",
|
| 94 |
+
"ERCC6L2",
|
| 95 |
+
"OR4E2",
|
| 96 |
+
"FUT2",
|
| 97 |
+
"BTBD3",
|
| 98 |
+
"AP1AR",
|
| 99 |
+
"COL2A1",
|
| 100 |
+
"NTPCR",
|
| 101 |
+
"ANKIB1",
|
| 102 |
+
"BTBD16",
|
| 103 |
+
"ARMCX2",
|
| 104 |
+
"C12orf60",
|
| 105 |
+
"CCDC120",
|
| 106 |
+
"EFHC2",
|
| 107 |
+
"OR5H6",
|
| 108 |
+
"DOCK6",
|
| 109 |
+
"CFAP69",
|
| 110 |
+
"FAM3D",
|
| 111 |
+
"APOBEC4",
|
| 112 |
+
"MAP2K2",
|
| 113 |
+
"ANKDD1B",
|
| 114 |
+
"NPBWR2",
|
| 115 |
+
"ANXA2",
|
| 116 |
+
"PTPN20",
|
| 117 |
+
"C1QTNF2",
|
| 118 |
+
"NAXD",
|
| 119 |
+
"GNRHR",
|
| 120 |
+
"MYOCD",
|
| 121 |
+
"COPG2IT1",
|
| 122 |
+
"SYCE1",
|
| 123 |
+
"TTC39A",
|
| 124 |
+
"ART1",
|
| 125 |
+
"ANKRD26P3",
|
| 126 |
+
"PCDHAC1",
|
| 127 |
+
"CDON",
|
| 128 |
+
"C8orf48",
|
| 129 |
+
"MCPH1",
|
| 130 |
+
"ADGRG7",
|
| 131 |
+
"BMPR2",
|
| 132 |
+
"CST1",
|
| 133 |
+
"ACSBG2",
|
| 134 |
+
"ACTN1",
|
| 135 |
+
"ZFP69",
|
| 136 |
+
"CCDC85A",
|
| 137 |
+
"PNLIPRP3",
|
| 138 |
+
"BGLAP",
|
| 139 |
+
"EFNB3",
|
| 140 |
+
"CD180",
|
| 141 |
+
"CNOT9",
|
| 142 |
+
"ZNF28",
|
| 143 |
+
"KCNQ5",
|
| 144 |
+
"LMX1B",
|
| 145 |
+
"CYSLTR2",
|
| 146 |
+
"LAPTM5",
|
| 147 |
+
"AVP",
|
| 148 |
+
"MOB3B",
|
| 149 |
+
"ALAD",
|
| 150 |
+
"C15orf32",
|
| 151 |
+
"CYP1B1-AS1",
|
| 152 |
+
"APOB",
|
| 153 |
+
"ANKRA2",
|
| 154 |
+
"AQP8",
|
| 155 |
+
"HOXD10",
|
| 156 |
+
"CHD7",
|
| 157 |
+
"CHST7",
|
| 158 |
+
"FAM169BP",
|
| 159 |
+
"ALG1L1P",
|
| 160 |
+
"EMP1",
|
| 161 |
+
"ZFTA",
|
| 162 |
+
"GPX2",
|
| 163 |
+
"IMMP1L",
|
| 164 |
+
"FABP5",
|
| 165 |
+
"ORM2",
|
| 166 |
+
"C6orf58",
|
| 167 |
+
"ANKRD30A",
|
| 168 |
+
"ANKRD63",
|
| 169 |
+
"PDS5A",
|
| 170 |
+
"CCDC34",
|
| 171 |
+
"FKBP6",
|
| 172 |
+
"ZNF132",
|
| 173 |
+
"RIMKLA",
|
| 174 |
+
"ZNF205",
|
| 175 |
+
"ADAMTS17",
|
| 176 |
+
"PCDHGC3",
|
| 177 |
+
"DHX40",
|
| 178 |
+
"HIPK4",
|
| 179 |
+
"TAAR8",
|
| 180 |
+
"SPIDR",
|
| 181 |
+
"PAX8",
|
| 182 |
+
"MARK1",
|
| 183 |
+
"OTOP3",
|
| 184 |
+
"B4GALT1",
|
| 185 |
+
"C10orf120",
|
| 186 |
+
"ZNF175",
|
| 187 |
+
"CFAP276",
|
| 188 |
+
"GPALPP1",
|
| 189 |
+
"CLRN3",
|
| 190 |
+
"VIPR2",
|
| 191 |
+
"RASIP1",
|
| 192 |
+
"CENPS-CORT",
|
| 193 |
+
"ATRNL1",
|
| 194 |
+
"DHX57",
|
| 195 |
+
"ASB9",
|
| 196 |
+
"DGKI",
|
| 197 |
+
"PTGS2",
|
| 198 |
+
"GAS2L3",
|
| 199 |
+
"NOS2",
|
| 200 |
+
"C1orf105",
|
| 201 |
+
"TXK",
|
| 202 |
+
"SP6",
|
| 203 |
+
"OR5AP2",
|
| 204 |
+
"CENPX",
|
| 205 |
+
"SLC6A13",
|
| 206 |
+
"ANKUB1",
|
| 207 |
+
"CAMK2N2",
|
| 208 |
+
"FLT1",
|
| 209 |
+
"CYP11B1",
|
| 210 |
+
"FBXL21P",
|
| 211 |
+
"MINAR2",
|
| 212 |
+
"TINAG",
|
| 213 |
+
"RPF1",
|
| 214 |
+
"ZNF600",
|
| 215 |
+
"CLDN7",
|
| 216 |
+
"CHEK1",
|
| 217 |
+
"IL2",
|
| 218 |
+
"ADGRG4",
|
| 219 |
+
"PHLDB2",
|
| 220 |
+
"REN",
|
| 221 |
+
"CHN2",
|
| 222 |
+
"SND1-IT1",
|
| 223 |
+
"ORC1",
|
| 224 |
+
"POLE2",
|
| 225 |
+
"MAPK8IP3",
|
| 226 |
+
"RFTN1",
|
| 227 |
+
"MT1IP",
|
| 228 |
+
"CTSL3P",
|
| 229 |
+
"TSPY26P",
|
| 230 |
+
"CCN1",
|
| 231 |
+
"CAMK1G",
|
| 232 |
+
"OR10A2",
|
| 233 |
+
"PGAM2",
|
| 234 |
+
"LINC02694",
|
| 235 |
+
"HLA-DRB4",
|
| 236 |
+
"DPYSL5",
|
| 237 |
+
"MRS2P2",
|
| 238 |
+
"UCHL1",
|
| 239 |
+
"CSKMT",
|
| 240 |
+
"HCG4B",
|
| 241 |
+
"AGPAT3",
|
| 242 |
+
"ASIC1",
|
| 243 |
+
"KNL1",
|
| 244 |
+
"LUC7L3",
|
| 245 |
+
"TPTE2P3",
|
| 246 |
+
"LY75",
|
| 247 |
+
"FNDC11",
|
| 248 |
+
"CMAS",
|
| 249 |
+
"SPDYE7P",
|
| 250 |
+
"CHRNB4",
|
| 251 |
+
"ARHGAP22",
|
| 252 |
+
"ZNF804A",
|
| 253 |
+
"KCNK9",
|
| 254 |
+
"ARMCX1",
|
| 255 |
+
"PRR29",
|
| 256 |
+
"CKAP2L",
|
| 257 |
+
"PRR15",
|
| 258 |
+
"ZNF57",
|
| 259 |
+
"ERP27",
|
| 260 |
+
"PRSS16"
|
| 261 |
+
],
|
| 262 |
+
"Coefficient": [
|
| 263 |
+
0.04386223153128403,
|
| 264 |
+
0.042384977559493095,
|
| 265 |
+
0.04203570497272073,
|
| 266 |
+
0.032779844683456356,
|
| 267 |
+
0.029147489800682096,
|
| 268 |
+
0.027809450140791447,
|
| 269 |
+
-0.027139267158551472,
|
| 270 |
+
0.026150549348357463,
|
| 271 |
+
0.025980486862179363,
|
| 272 |
+
0.024672204018864118,
|
| 273 |
+
0.02218575397075114,
|
| 274 |
+
0.021280988800627728,
|
| 275 |
+
0.021156132687406775,
|
| 276 |
+
0.020770074153426896,
|
| 277 |
+
0.01992862305460098,
|
| 278 |
+
0.01977142519223027,
|
| 279 |
+
0.019625134140307154,
|
| 280 |
+
0.018804089198262715,
|
| 281 |
+
0.01851888645951651,
|
| 282 |
+
0.01834126153912939,
|
| 283 |
+
0.01691818077178918,
|
| 284 |
+
0.016437149645820385,
|
| 285 |
+
0.016410419788154256,
|
| 286 |
+
0.016273715657065427,
|
| 287 |
+
-0.01614690010774613,
|
| 288 |
+
-0.015859692740191795,
|
| 289 |
+
-0.015194767626804216,
|
| 290 |
+
-0.015166472765329893,
|
| 291 |
+
0.015146922922749063,
|
| 292 |
+
0.014374031661343208,
|
| 293 |
+
0.013723157335607047,
|
| 294 |
+
0.013411459310723559,
|
| 295 |
+
-0.013112570416485746,
|
| 296 |
+
-0.01270944351460904,
|
| 297 |
+
0.012440200443766994,
|
| 298 |
+
0.012359746989971861,
|
| 299 |
+
0.012220667852123588,
|
| 300 |
+
0.011889368005214626,
|
| 301 |
+
0.01089069420444746,
|
| 302 |
+
0.01038705279866463,
|
| 303 |
+
0.010236208233762709,
|
| 304 |
+
-0.010061171620974215,
|
| 305 |
+
0.010053378783699673,
|
| 306 |
+
-0.009741798305527906,
|
| 307 |
+
0.009552252085518393,
|
| 308 |
+
0.009114430171710092,
|
| 309 |
+
-0.008975875169335588,
|
| 310 |
+
0.008855441297520509,
|
| 311 |
+
-0.008836832993024688,
|
| 312 |
+
0.008757867169791047,
|
| 313 |
+
0.008630557646373058,
|
| 314 |
+
0.008221736620784714,
|
| 315 |
+
0.008188000295669358,
|
| 316 |
+
-0.008125340062368716,
|
| 317 |
+
0.008103843221132218,
|
| 318 |
+
-0.0078039053979973025,
|
| 319 |
+
-0.0077120942157136285,
|
| 320 |
+
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2.032452224405562e-07
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| 520 |
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],
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| 521 |
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"Absolute Coefficient": [
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| 522 |
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0.04386223153128403,
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0.042384977559493095,
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| 783 |
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| 795 |
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|
p3/regress/Atrial_Fibrillation/significant_genes_condition_Cardiovascular_Disease.json
ADDED
|
@@ -0,0 +1,849 @@
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|
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|
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|
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|
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|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"HPN",
|
| 5 |
+
"A2M",
|
| 6 |
+
"ABCA6",
|
| 7 |
+
"ACSM3",
|
| 8 |
+
"CIB4",
|
| 9 |
+
"AFP",
|
| 10 |
+
"ARHGAP44",
|
| 11 |
+
"ARRDC1-AS1",
|
| 12 |
+
"ANKRD53",
|
| 13 |
+
"ACSM4",
|
| 14 |
+
"DNAH10",
|
| 15 |
+
"BTBD19",
|
| 16 |
+
"CD207",
|
| 17 |
+
"ARSF",
|
| 18 |
+
"GGT7",
|
| 19 |
+
"BIRC7",
|
| 20 |
+
"ACE",
|
| 21 |
+
"ADGRF1",
|
| 22 |
+
"ACER3",
|
| 23 |
+
"GRM8",
|
| 24 |
+
"ADRA2C",
|
| 25 |
+
"ARMH4",
|
| 26 |
+
"CRYZL1",
|
| 27 |
+
"KCTD9",
|
| 28 |
+
"GLI1",
|
| 29 |
+
"BICDL1",
|
| 30 |
+
"ERG",
|
| 31 |
+
"ASCL1",
|
| 32 |
+
"TTTY7",
|
| 33 |
+
"SLC29A4",
|
| 34 |
+
"ITPA",
|
| 35 |
+
"CPZ",
|
| 36 |
+
"COA7",
|
| 37 |
+
"EFNA4",
|
| 38 |
+
"SPMIP7",
|
| 39 |
+
"LRTM2",
|
| 40 |
+
"FAM218A",
|
| 41 |
+
"NTNG1",
|
| 42 |
+
"IPP",
|
| 43 |
+
"TNNT1",
|
| 44 |
+
"AP2B1",
|
| 45 |
+
"DHCR24",
|
| 46 |
+
"C6orf163",
|
| 47 |
+
"CHURC1",
|
| 48 |
+
"MIR155HG",
|
| 49 |
+
"TBX1",
|
| 50 |
+
"ACTC1",
|
| 51 |
+
"BIN2",
|
| 52 |
+
"ADAMTS2",
|
| 53 |
+
"PRDM12",
|
| 54 |
+
"BPIFA1",
|
| 55 |
+
"CADPS",
|
| 56 |
+
"CX3CL1",
|
| 57 |
+
"CAMK2N2",
|
| 58 |
+
"ARHGEF12",
|
| 59 |
+
"MAP2K2",
|
| 60 |
+
"ERCC6L2",
|
| 61 |
+
"ACTRT2",
|
| 62 |
+
"ANKRD26P1",
|
| 63 |
+
"IL2",
|
| 64 |
+
"C11orf98",
|
| 65 |
+
"AP1S3",
|
| 66 |
+
"CDCA3",
|
| 67 |
+
"GAA",
|
| 68 |
+
"EFEMP1",
|
| 69 |
+
"BARHL2",
|
| 70 |
+
"CYP2C19",
|
| 71 |
+
"CAPN11",
|
| 72 |
+
"CAMK1D",
|
| 73 |
+
"CHRND",
|
| 74 |
+
"AMFR",
|
| 75 |
+
"FUT2",
|
| 76 |
+
"OR5H6",
|
| 77 |
+
"C1QTNF2",
|
| 78 |
+
"IMMP1L",
|
| 79 |
+
"ZNF22-AS1",
|
| 80 |
+
"ART1",
|
| 81 |
+
"ZXDA",
|
| 82 |
+
"DBH",
|
| 83 |
+
"APOA1",
|
| 84 |
+
"PRSS55",
|
| 85 |
+
"TRPV3",
|
| 86 |
+
"ATP11AUN",
|
| 87 |
+
"SLC25A33",
|
| 88 |
+
"DEFB103A",
|
| 89 |
+
"MARK1",
|
| 90 |
+
"TSSK1B",
|
| 91 |
+
"FMOD",
|
| 92 |
+
"ACCS",
|
| 93 |
+
"C6orf58",
|
| 94 |
+
"CD109",
|
| 95 |
+
"OTOP3",
|
| 96 |
+
"ALOX15",
|
| 97 |
+
"TSPY26P",
|
| 98 |
+
"BEGAIN",
|
| 99 |
+
"CNOT9",
|
| 100 |
+
"MRAP",
|
| 101 |
+
"LHX6",
|
| 102 |
+
"ANKRD20A1",
|
| 103 |
+
"AHCTF1",
|
| 104 |
+
"CD180",
|
| 105 |
+
"VIPR2",
|
| 106 |
+
"FAM118B",
|
| 107 |
+
"PRR19",
|
| 108 |
+
"BSX",
|
| 109 |
+
"FAM3D",
|
| 110 |
+
"ANKRD63",
|
| 111 |
+
"MTRNR2L3",
|
| 112 |
+
"ALG1L1P",
|
| 113 |
+
"CENPX",
|
| 114 |
+
"CHST7",
|
| 115 |
+
"B4GALT1",
|
| 116 |
+
"ANAPC15",
|
| 117 |
+
"CCDC34",
|
| 118 |
+
"C8orf48",
|
| 119 |
+
"ANKIB1",
|
| 120 |
+
"PTPN20",
|
| 121 |
+
"DOCK6",
|
| 122 |
+
"HLA-DPB2",
|
| 123 |
+
"AP1AR",
|
| 124 |
+
"KRTAP4-5",
|
| 125 |
+
"APOB",
|
| 126 |
+
"SLC30A8",
|
| 127 |
+
"NPBWR2",
|
| 128 |
+
"FBXL21P",
|
| 129 |
+
"CHD7",
|
| 130 |
+
"ARSA",
|
| 131 |
+
"BRD7P3",
|
| 132 |
+
"ACSL3",
|
| 133 |
+
"S100G",
|
| 134 |
+
"ORC1",
|
| 135 |
+
"NAXD",
|
| 136 |
+
"LAPTM5",
|
| 137 |
+
"TAF7L",
|
| 138 |
+
"CFAP69",
|
| 139 |
+
"EVA1B",
|
| 140 |
+
"BTBD3",
|
| 141 |
+
"AS3MT",
|
| 142 |
+
"ANXA2",
|
| 143 |
+
"EMP1",
|
| 144 |
+
"DHX57",
|
| 145 |
+
"CYP11B1",
|
| 146 |
+
"PSD2",
|
| 147 |
+
"C1orf105",
|
| 148 |
+
"COL2A1",
|
| 149 |
+
"CAMK1G",
|
| 150 |
+
"AHCY",
|
| 151 |
+
"CFAP68",
|
| 152 |
+
"SPIDR",
|
| 153 |
+
"ANKRD26P3",
|
| 154 |
+
"RFTN1",
|
| 155 |
+
"CDON",
|
| 156 |
+
"SP6",
|
| 157 |
+
"ATRNL1",
|
| 158 |
+
"CHRNB4",
|
| 159 |
+
"PEX12",
|
| 160 |
+
"AFG3L2",
|
| 161 |
+
"ZFP69",
|
| 162 |
+
"BGLAP",
|
| 163 |
+
"OR4F4",
|
| 164 |
+
"BMPR2",
|
| 165 |
+
"CADM2",
|
| 166 |
+
"RPF1",
|
| 167 |
+
"MIPOL1",
|
| 168 |
+
"ALOX12P2",
|
| 169 |
+
"ALDH1A2",
|
| 170 |
+
"CKS2",
|
| 171 |
+
"NTPCR",
|
| 172 |
+
"MYOCD",
|
| 173 |
+
"FREM1",
|
| 174 |
+
"XKRX",
|
| 175 |
+
"ARMCX2",
|
| 176 |
+
"ASB9",
|
| 177 |
+
"APOL5",
|
| 178 |
+
"CLEC12B",
|
| 179 |
+
"GRM1",
|
| 180 |
+
"ANKMY2",
|
| 181 |
+
"C1QTNF3",
|
| 182 |
+
"CYSLTR2",
|
| 183 |
+
"CAV3",
|
| 184 |
+
"ANKDD1B",
|
| 185 |
+
"PCDHGC3",
|
| 186 |
+
"LIPF",
|
| 187 |
+
"GNRHR",
|
| 188 |
+
"HLA-DRB4",
|
| 189 |
+
"MOB3B",
|
| 190 |
+
"NIPA1",
|
| 191 |
+
"C5orf47",
|
| 192 |
+
"ADCK2",
|
| 193 |
+
"ZNF804A",
|
| 194 |
+
"BMP7",
|
| 195 |
+
"PRDM11",
|
| 196 |
+
"TAAR8",
|
| 197 |
+
"COPG2IT1",
|
| 198 |
+
"MTIF2",
|
| 199 |
+
"SH2D1B",
|
| 200 |
+
"RNF212",
|
| 201 |
+
"DTNBP1",
|
| 202 |
+
"ABT1",
|
| 203 |
+
"TTC39A",
|
| 204 |
+
"ACO1",
|
| 205 |
+
"GPR31",
|
| 206 |
+
"NPNT",
|
| 207 |
+
"GPX2",
|
| 208 |
+
"MT1IP",
|
| 209 |
+
"ADGRG7",
|
| 210 |
+
"C12orf60",
|
| 211 |
+
"TPTE2P3",
|
| 212 |
+
"ANKRA2",
|
| 213 |
+
"PANK1",
|
| 214 |
+
"IRF5",
|
| 215 |
+
"OR4E2",
|
| 216 |
+
"CSN1S2AP",
|
| 217 |
+
"MRS2P2",
|
| 218 |
+
"CENPS-CORT",
|
| 219 |
+
"INE1",
|
| 220 |
+
"FABP5",
|
| 221 |
+
"CSKMT",
|
| 222 |
+
"APOBEC4",
|
| 223 |
+
"AQP8",
|
| 224 |
+
"CST1",
|
| 225 |
+
"ZNF347",
|
| 226 |
+
"ICAM4",
|
| 227 |
+
"RNPEP",
|
| 228 |
+
"AICDA",
|
| 229 |
+
"SFTPB",
|
| 230 |
+
"CFAP418",
|
| 231 |
+
"PNLIPRP3",
|
| 232 |
+
"ORM1",
|
| 233 |
+
"FZD6",
|
| 234 |
+
"POU6F2",
|
| 235 |
+
"KLHL4",
|
| 236 |
+
"ATP6V1E2",
|
| 237 |
+
"BACE2",
|
| 238 |
+
"BLM",
|
| 239 |
+
"CHN2",
|
| 240 |
+
"CHEK1",
|
| 241 |
+
"LRRC72",
|
| 242 |
+
"MKX",
|
| 243 |
+
"ASPN",
|
| 244 |
+
"C15orf32",
|
| 245 |
+
"FOXC2",
|
| 246 |
+
"PPP1R17",
|
| 247 |
+
"TKFC",
|
| 248 |
+
"TRIM44",
|
| 249 |
+
"ZNF28",
|
| 250 |
+
"ACOXL",
|
| 251 |
+
"AMIGO3",
|
| 252 |
+
"OR10A2",
|
| 253 |
+
"OR4N2",
|
| 254 |
+
"OR2T5",
|
| 255 |
+
"EFNB3",
|
| 256 |
+
"CCDC80",
|
| 257 |
+
"TBC1D28",
|
| 258 |
+
"ARL2BPP2",
|
| 259 |
+
"KRT17",
|
| 260 |
+
"SND1-IT1",
|
| 261 |
+
"DHX40",
|
| 262 |
+
"DGKE",
|
| 263 |
+
"HUS1",
|
| 264 |
+
"ANKK1",
|
| 265 |
+
"NWD2",
|
| 266 |
+
"ZNF175",
|
| 267 |
+
"IL33",
|
| 268 |
+
"LINC02694",
|
| 269 |
+
"KCNA2",
|
| 270 |
+
"RXFP2",
|
| 271 |
+
"SNX12",
|
| 272 |
+
"NPFFR2",
|
| 273 |
+
"ADAMTS1",
|
| 274 |
+
"ERAS",
|
| 275 |
+
"IL18RAP",
|
| 276 |
+
"FAM234B",
|
| 277 |
+
"GSDMA",
|
| 278 |
+
"DLK2"
|
| 279 |
+
],
|
| 280 |
+
"Coefficient": [
|
| 281 |
+
0.04554868223641949,
|
| 282 |
+
0.04365047316495424,
|
| 283 |
+
0.03754421130308793,
|
| 284 |
+
0.034115539689230874,
|
| 285 |
+
0.030048051093767653,
|
| 286 |
+
0.02770240618877453,
|
| 287 |
+
0.02705749874213057,
|
| 288 |
+
0.025183809860646042,
|
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3.7271821531393243e-08
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| 556 |
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],
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| 557 |
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"Absolute Coefficient": [
|
| 558 |
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0.04554868223641949,
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| 559 |
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0.04365047316495424,
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0.03754421130308793,
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}
|
p3/regress/Atrial_Fibrillation/significant_genes_condition_Chronic_kidney_disease.json
ADDED
|
@@ -0,0 +1,273 @@
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|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"JAG2",
|
| 5 |
+
"HPN",
|
| 6 |
+
"GGT7",
|
| 7 |
+
"MIR155HG",
|
| 8 |
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"TTTY7",
|
| 9 |
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"NPBWR2",
|
| 10 |
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"APOB",
|
| 11 |
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"SFTPB",
|
| 12 |
+
"SPMIP7",
|
| 13 |
+
"PHLDB2",
|
| 14 |
+
"KRT17",
|
| 15 |
+
"TCF21",
|
| 16 |
+
"EFEMP1",
|
| 17 |
+
"SP6",
|
| 18 |
+
"CDCA3",
|
| 19 |
+
"TBX1",
|
| 20 |
+
"TGM5",
|
| 21 |
+
"COA7",
|
| 22 |
+
"MARK1",
|
| 23 |
+
"CSKMT",
|
| 24 |
+
"SASS6",
|
| 25 |
+
"CIB4",
|
| 26 |
+
"SLC29A4",
|
| 27 |
+
"GRM8",
|
| 28 |
+
"SLC25A33",
|
| 29 |
+
"KCTD9",
|
| 30 |
+
"WTIP",
|
| 31 |
+
"AQP8",
|
| 32 |
+
"ZNF22-AS1",
|
| 33 |
+
"FLT1",
|
| 34 |
+
"DNAH10",
|
| 35 |
+
"CDRT4",
|
| 36 |
+
"ARHGAP44",
|
| 37 |
+
"USP2",
|
| 38 |
+
"CAMK1D",
|
| 39 |
+
"RBMX",
|
| 40 |
+
"IPP",
|
| 41 |
+
"FUT2",
|
| 42 |
+
"ZNF543",
|
| 43 |
+
"NTNG1",
|
| 44 |
+
"PRKRIP1",
|
| 45 |
+
"XKR9",
|
| 46 |
+
"ADGRB2",
|
| 47 |
+
"SLCO4A1",
|
| 48 |
+
"BTBD19",
|
| 49 |
+
"OTOP3",
|
| 50 |
+
"GLI1",
|
| 51 |
+
"LRRC72",
|
| 52 |
+
"PRR19",
|
| 53 |
+
"FNDC11",
|
| 54 |
+
"TNNT1",
|
| 55 |
+
"REN",
|
| 56 |
+
"TSSK1B",
|
| 57 |
+
"VIPR2",
|
| 58 |
+
"FARP2",
|
| 59 |
+
"LRRC58",
|
| 60 |
+
"GPR31",
|
| 61 |
+
"KRT12",
|
| 62 |
+
"PTPN20",
|
| 63 |
+
"KIF2C",
|
| 64 |
+
"TNNI3",
|
| 65 |
+
"MAP2K2",
|
| 66 |
+
"TSPY2",
|
| 67 |
+
"MAMDC4",
|
| 68 |
+
"ZFYVE19",
|
| 69 |
+
"OR2J3",
|
| 70 |
+
"KCNJ1",
|
| 71 |
+
"TAS1R2",
|
| 72 |
+
"BGLAP",
|
| 73 |
+
"HLA-DPB2",
|
| 74 |
+
"TEX14",
|
| 75 |
+
"CLDN18",
|
| 76 |
+
"MTMR9",
|
| 77 |
+
"CLLU1-AS1",
|
| 78 |
+
"PNCK",
|
| 79 |
+
"TBC1D28",
|
| 80 |
+
"EVA1B",
|
| 81 |
+
"CCNT1",
|
| 82 |
+
"ACSM4",
|
| 83 |
+
"ARRDC1-AS1",
|
| 84 |
+
"FBXL21P",
|
| 85 |
+
"CHURC1",
|
| 86 |
+
"TRPV3"
|
| 87 |
+
],
|
| 88 |
+
"Coefficient": [
|
| 89 |
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0.05882999806419675,
|
| 90 |
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0.04969228176263211,
|
| 91 |
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0.04570532727038269,
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| 92 |
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0.043111484348889624,
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| 93 |
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0.04229797370206445,
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0.03837324831190176,
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0.037951417503123946,
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| 96 |
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0.033880200498633564,
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| 97 |
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0.032422657987592335,
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0.03202472425916236,
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0.031054725376360254,
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| 100 |
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0.0235238109156627,
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| 101 |
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0.022305729950575212,
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| 103 |
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| 104 |
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| 111 |
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0.014557117929948281,
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| 114 |
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| 115 |
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0.012962289111285897,
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| 116 |
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| 117 |
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| 118 |
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0.009903844102554668,
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| 119 |
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0.009724690193783202,
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0.004438254940759716,
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0.000265250023560448,
|
| 171 |
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-0.0001821577235790224
|
| 172 |
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],
|
| 173 |
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"Absolute Coefficient": [
|
| 174 |
+
0.05882999806419675,
|
| 175 |
+
0.04969228176263211,
|
| 176 |
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0.04570532727038269,
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0.019887336143367823,
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0.01672989412964097,
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0.014168462365415814,
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0.011009618917001675,
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0.009903844102554668,
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0.009724690193783202,
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0.0037081762250583622,
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0.0032548973150346226,
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0.003019881265859379,
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0.002953127595007365,
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0.0026753548987709297,
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0.0022322963912768234,
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0.0015929663915597771,
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0.0015846511620126577,
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0.0015306511526509711,
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0.001523112040962107,
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|
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0.001106207179372348,
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0.001087358032230939,
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0.0009827926088191896,
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0.0009709530118917529,
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0.0009493980135257387,
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0.0008101296601806184,
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0.000604584318070277,
|
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0.0004637683206749192,
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0.00045670020719454433,
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0.00043244094737171675,
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0.00042363410215579044,
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0.0004082226292518642,
|
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0.000265250023560448,
|
| 256 |
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0.0001821577235790224
|
| 257 |
+
]
|
| 258 |
+
},
|
| 259 |
+
"cv_performance": {
|
| 260 |
+
"prediction": {
|
| 261 |
+
"accuracy": 82.6086956521739,
|
| 262 |
+
"precision": 26.666666666666664,
|
| 263 |
+
"recall": 19.999999999999996,
|
| 264 |
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"f1": 18.88888888888889
|
| 265 |
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},
|
| 266 |
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"selection": {
|
| 267 |
+
"precision": 2.6753429900025685,
|
| 268 |
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"recall": 0.5389221556886227,
|
| 269 |
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"f1": 0.8955670264821686,
|
| 270 |
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"jaccard": 0.45014785360661264
|
| 271 |
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}
|
| 272 |
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}
|
| 273 |
+
}
|
p3/regress/Atrial_Fibrillation/significant_genes_condition_Chronic_obstructive_pulmonary_disease_(COPD).json
ADDED
|
@@ -0,0 +1,252 @@
|
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|
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|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"MIR155HG",
|
| 5 |
+
"HPN",
|
| 6 |
+
"GGT7",
|
| 7 |
+
"TTTY7",
|
| 8 |
+
"NPBWR2",
|
| 9 |
+
"SASS6",
|
| 10 |
+
"DNAH10",
|
| 11 |
+
"SFTPB",
|
| 12 |
+
"A2M",
|
| 13 |
+
"JAG2",
|
| 14 |
+
"APOB",
|
| 15 |
+
"EFEMP1",
|
| 16 |
+
"SPMIP7",
|
| 17 |
+
"MARK1",
|
| 18 |
+
"WTIP",
|
| 19 |
+
"KRT17",
|
| 20 |
+
"CIB4",
|
| 21 |
+
"FLT1",
|
| 22 |
+
"SLC29A4",
|
| 23 |
+
"PHLDB2",
|
| 24 |
+
"CDCA3",
|
| 25 |
+
"TCF21",
|
| 26 |
+
"GRM8",
|
| 27 |
+
"KCTD9",
|
| 28 |
+
"PRKRIP1",
|
| 29 |
+
"FUT2",
|
| 30 |
+
"OR5C1",
|
| 31 |
+
"TBX1",
|
| 32 |
+
"CLLU1-AS1",
|
| 33 |
+
"CCNT1",
|
| 34 |
+
"CRYBA1",
|
| 35 |
+
"CDRT4",
|
| 36 |
+
"KRT12",
|
| 37 |
+
"SLCO4A1",
|
| 38 |
+
"IPP",
|
| 39 |
+
"TNNT1",
|
| 40 |
+
"ARHGAP44",
|
| 41 |
+
"UNC5CL",
|
| 42 |
+
"CHURC1",
|
| 43 |
+
"MTMR9",
|
| 44 |
+
"GPR31",
|
| 45 |
+
"ACSM4",
|
| 46 |
+
"IMMP1L",
|
| 47 |
+
"SP6",
|
| 48 |
+
"PAX8",
|
| 49 |
+
"BTBD19",
|
| 50 |
+
"IL10",
|
| 51 |
+
"ADGRB2",
|
| 52 |
+
"COA7",
|
| 53 |
+
"NLRP4",
|
| 54 |
+
"SLC30A8",
|
| 55 |
+
"ACTRT2",
|
| 56 |
+
"DBH",
|
| 57 |
+
"TAS1R2",
|
| 58 |
+
"USP2",
|
| 59 |
+
"REN",
|
| 60 |
+
"OTOP3",
|
| 61 |
+
"CD180",
|
| 62 |
+
"PNCK",
|
| 63 |
+
"MAP2K2",
|
| 64 |
+
"TSSK1B",
|
| 65 |
+
"RNF223",
|
| 66 |
+
"OR2T5",
|
| 67 |
+
"RBMX",
|
| 68 |
+
"DNAH11",
|
| 69 |
+
"H1-2",
|
| 70 |
+
"DOCK6",
|
| 71 |
+
"EVA1B",
|
| 72 |
+
"ZNF22-AS1",
|
| 73 |
+
"KRTAP4-5",
|
| 74 |
+
"PTPN20",
|
| 75 |
+
"ZFYVE19",
|
| 76 |
+
"UCHL1",
|
| 77 |
+
"POLE2",
|
| 78 |
+
"TAAR8",
|
| 79 |
+
"FNDC11"
|
| 80 |
+
],
|
| 81 |
+
"Coefficient": [
|
| 82 |
+
0.04906910296427068,
|
| 83 |
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0.04738705460396516,
|
| 84 |
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0.04230606705362966,
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| 85 |
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0.04090413721140481,
|
| 86 |
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0.03266420411314948,
|
| 87 |
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0.03197122594214753,
|
| 88 |
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0.03121149237405398,
|
| 89 |
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0.030184077232241424,
|
| 90 |
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0.02965243447498304,
|
| 91 |
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0.02730330554265937,
|
| 92 |
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0.026273112633566353,
|
| 93 |
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0.025822114983714117,
|
| 94 |
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0.025743945043145717,
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| 95 |
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0.02539206863924999,
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| 96 |
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0.024180865976214074,
|
| 97 |
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0.02287930827003428,
|
| 98 |
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0.021898692590705805,
|
| 99 |
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0.01947648011634306,
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| 100 |
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0.018646827453349803,
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| 101 |
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0.017724501530212405,
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| 102 |
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0.01731610530030178,
|
| 103 |
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0.01722886038256368,
|
| 104 |
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0.016537686944561248,
|
| 105 |
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| 106 |
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| 107 |
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0.012330979432186334,
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| 108 |
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0.011438833846849834,
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| 109 |
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0.01073983642752726,
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| 110 |
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0.010375169978600574,
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| 111 |
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0.009472861091482716,
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0.008220421703811253,
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0.004357620516758267,
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0.0017064470069656152,
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0.0004072200638148829,
|
| 157 |
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0.0002459701162187467
|
| 158 |
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],
|
| 159 |
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"Absolute Coefficient": [
|
| 160 |
+
0.04906910296427068,
|
| 161 |
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0.04738705460396516,
|
| 162 |
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0.04230606705362966,
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0.02730330554265937,
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0.025743945043145717,
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0.024180865976214074,
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0.02287930827003428,
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| 176 |
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0.021898692590705805,
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0.01947648011634306,
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0.018646827453349803,
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0.01722886038256368,
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| 187 |
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0.008220421703811253,
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0.008071670779235443,
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0.007985134324894332,
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0.007691654075766335,
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0.006921549345066436,
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0.006454936904019453,
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0.006376073193414812,
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0.006142272352366805,
|
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0.006097380193186287,
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0.00605670855596475,
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0.005986838418083623,
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0.005886555106652704,
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0.005741119163883864,
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0.004975808034259733,
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0.004776683281419068,
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0.004657856731187405,
|
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0.004357620516758267,
|
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0.0028145968585973546,
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0.002716494523113465,
|
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0.0021044389440826837,
|
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0.0017844895726207592,
|
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0.0017064470069656152,
|
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0.0016737589855226331,
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0.0016256368651190716,
|
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0.0015663635844985109,
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0.001477284671982893,
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0.0013695808751861477,
|
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0.0013665727108604657,
|
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0.0010995315629529212,
|
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0.0010194226511506387,
|
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0.0008698743566227095,
|
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0.0008481423450025703,
|
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0.000512622188074866,
|
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0.0004927382653932821,
|
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0.000472479867104135,
|
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0.0004072200638148829,
|
| 235 |
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0.0002459701162187467
|
| 236 |
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]
|
| 237 |
+
},
|
| 238 |
+
"cv_performance": {
|
| 239 |
+
"prediction": {
|
| 240 |
+
"accuracy": 85.21739130434781,
|
| 241 |
+
"precision": 26.666666666666664,
|
| 242 |
+
"recall": 19.999999999999996,
|
| 243 |
+
"f1": 18.88888888888889
|
| 244 |
+
},
|
| 245 |
+
"selection": {
|
| 246 |
+
"precision": 1.9073635882318687,
|
| 247 |
+
"recall": 0.41916167664670656,
|
| 248 |
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"f1": 0.6870470550200666,
|
| 249 |
+
"jaccard": 0.34532920612322665
|
| 250 |
+
}
|
| 251 |
+
}
|
| 252 |
+
}
|
p3/regress/Atrial_Fibrillation/significant_genes_condition_Coronary_artery_disease.json
ADDED
|
@@ -0,0 +1,840 @@
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"HPN",
|
| 5 |
+
"A2M",
|
| 6 |
+
"ACSM3",
|
| 7 |
+
"ABCA6",
|
| 8 |
+
"CIB4",
|
| 9 |
+
"ARHGAP44",
|
| 10 |
+
"DNAH10",
|
| 11 |
+
"ACSM4",
|
| 12 |
+
"ARSF",
|
| 13 |
+
"ADGRF1",
|
| 14 |
+
"BICDL1",
|
| 15 |
+
"ACE",
|
| 16 |
+
"CD207",
|
| 17 |
+
"GRM8",
|
| 18 |
+
"ACER3",
|
| 19 |
+
"ASCL1",
|
| 20 |
+
"ADRA2C",
|
| 21 |
+
"AFP",
|
| 22 |
+
"BTBD19",
|
| 23 |
+
"ARMH4",
|
| 24 |
+
"ARRDC1-AS1",
|
| 25 |
+
"ANKRD53",
|
| 26 |
+
"GGT7",
|
| 27 |
+
"CRYZL1",
|
| 28 |
+
"EFNA4",
|
| 29 |
+
"CAMK1D",
|
| 30 |
+
"BIRC7",
|
| 31 |
+
"TBX1",
|
| 32 |
+
"COA7",
|
| 33 |
+
"ERG",
|
| 34 |
+
"FAM218A",
|
| 35 |
+
"CADPS",
|
| 36 |
+
"OR5H6",
|
| 37 |
+
"BPIFA1",
|
| 38 |
+
"KCTD9",
|
| 39 |
+
"NTNG1",
|
| 40 |
+
"SPMIP7",
|
| 41 |
+
"C6orf163",
|
| 42 |
+
"CX3CL1",
|
| 43 |
+
"ADAMTS2",
|
| 44 |
+
"GLI1",
|
| 45 |
+
"AP2B1",
|
| 46 |
+
"ARHGEF12",
|
| 47 |
+
"IMMP1L",
|
| 48 |
+
"TRPV3",
|
| 49 |
+
"C1QTNF2",
|
| 50 |
+
"LRTM2",
|
| 51 |
+
"AMFR",
|
| 52 |
+
"BARHL2",
|
| 53 |
+
"APOA1",
|
| 54 |
+
"EFEMP1",
|
| 55 |
+
"PRDM12",
|
| 56 |
+
"ERCC6L2",
|
| 57 |
+
"C11orf98",
|
| 58 |
+
"SLC29A4",
|
| 59 |
+
"DHCR24",
|
| 60 |
+
"APOBEC4",
|
| 61 |
+
"CAPN11",
|
| 62 |
+
"AP1S3",
|
| 63 |
+
"DEFB103A",
|
| 64 |
+
"KRTAP4-5",
|
| 65 |
+
"IPP",
|
| 66 |
+
"CYP2C19",
|
| 67 |
+
"AVP",
|
| 68 |
+
"CAMKK2",
|
| 69 |
+
"CHURC1",
|
| 70 |
+
"FBXL21P",
|
| 71 |
+
"GSDMA",
|
| 72 |
+
"MIR155HG",
|
| 73 |
+
"MAP2K2",
|
| 74 |
+
"BMP7",
|
| 75 |
+
"ACTC1",
|
| 76 |
+
"BRD7P3",
|
| 77 |
+
"TNNT1",
|
| 78 |
+
"ALOX15",
|
| 79 |
+
"DOCK6",
|
| 80 |
+
"ARL2BPP2",
|
| 81 |
+
"FKBP4",
|
| 82 |
+
"C6orf58",
|
| 83 |
+
"HOXD4",
|
| 84 |
+
"ART1",
|
| 85 |
+
"FUT2",
|
| 86 |
+
"TTTY7",
|
| 87 |
+
"ANXA2",
|
| 88 |
+
"FBXO39",
|
| 89 |
+
"ACCS",
|
| 90 |
+
"DBH",
|
| 91 |
+
"PRSS55",
|
| 92 |
+
"CHST7",
|
| 93 |
+
"CDCA3",
|
| 94 |
+
"LAPTM5",
|
| 95 |
+
"ANAPC15",
|
| 96 |
+
"ANKRA2",
|
| 97 |
+
"FAM3D",
|
| 98 |
+
"DTNBP1",
|
| 99 |
+
"IL2",
|
| 100 |
+
"NIPA1",
|
| 101 |
+
"HLA-DPB2",
|
| 102 |
+
"DDX50",
|
| 103 |
+
"BTBD16",
|
| 104 |
+
"ADGRG7",
|
| 105 |
+
"ANKRD26P3",
|
| 106 |
+
"CHRND",
|
| 107 |
+
"TSSK1B",
|
| 108 |
+
"DHX57",
|
| 109 |
+
"ANKRD26P1",
|
| 110 |
+
"LRRC72",
|
| 111 |
+
"CCNF",
|
| 112 |
+
"COL2A1",
|
| 113 |
+
"CFAP418",
|
| 114 |
+
"GPX2",
|
| 115 |
+
"MRAP",
|
| 116 |
+
"ITPA",
|
| 117 |
+
"XKRX",
|
| 118 |
+
"MYOCD",
|
| 119 |
+
"ZXDA",
|
| 120 |
+
"ALDH1A2",
|
| 121 |
+
"CCDC34",
|
| 122 |
+
"AHCY",
|
| 123 |
+
"KBTBD6",
|
| 124 |
+
"SLC25A33",
|
| 125 |
+
"ATP11AUN",
|
| 126 |
+
"S100G",
|
| 127 |
+
"PSD2",
|
| 128 |
+
"BMPR2",
|
| 129 |
+
"SLC25A29",
|
| 130 |
+
"KCNQ5",
|
| 131 |
+
"ARHGAP22",
|
| 132 |
+
"EVA1B",
|
| 133 |
+
"CPZ",
|
| 134 |
+
"FMOD",
|
| 135 |
+
"APOB",
|
| 136 |
+
"MOB3B",
|
| 137 |
+
"TAAR8",
|
| 138 |
+
"OR4F4",
|
| 139 |
+
"CFL2",
|
| 140 |
+
"GAA",
|
| 141 |
+
"FREM1",
|
| 142 |
+
"BIN2",
|
| 143 |
+
"CHD7",
|
| 144 |
+
"SP6",
|
| 145 |
+
"ACVR1C",
|
| 146 |
+
"PRR19",
|
| 147 |
+
"BTBD3",
|
| 148 |
+
"TAF7L",
|
| 149 |
+
"ZNF804A",
|
| 150 |
+
"C1QTNF3",
|
| 151 |
+
"CFAP69",
|
| 152 |
+
"GRIK4",
|
| 153 |
+
"CENPX",
|
| 154 |
+
"FRMD7",
|
| 155 |
+
"RBMX",
|
| 156 |
+
"ACSL3",
|
| 157 |
+
"CAMK1G",
|
| 158 |
+
"CAMK2N2",
|
| 159 |
+
"ANKMY1",
|
| 160 |
+
"BGLAP",
|
| 161 |
+
"MIPOL1",
|
| 162 |
+
"COPG2IT1",
|
| 163 |
+
"LIPF",
|
| 164 |
+
"TTC39A",
|
| 165 |
+
"ANKK1",
|
| 166 |
+
"PTPN20",
|
| 167 |
+
"BSX",
|
| 168 |
+
"NAXD",
|
| 169 |
+
"IRF5",
|
| 170 |
+
"PNLIPRP3",
|
| 171 |
+
"DGKE",
|
| 172 |
+
"C15orf32",
|
| 173 |
+
"OR4E2",
|
| 174 |
+
"C1orf105",
|
| 175 |
+
"CBARP",
|
| 176 |
+
"APOL5",
|
| 177 |
+
"CD180",
|
| 178 |
+
"PTGS2",
|
| 179 |
+
"TBC1D28",
|
| 180 |
+
"ORC1",
|
| 181 |
+
"B4GALT1",
|
| 182 |
+
"GNRHR",
|
| 183 |
+
"DGKI",
|
| 184 |
+
"C10orf67",
|
| 185 |
+
"FABP5",
|
| 186 |
+
"FOXC2",
|
| 187 |
+
"MT1IP",
|
| 188 |
+
"ZNF28",
|
| 189 |
+
"ARFIP1",
|
| 190 |
+
"SLC2A10",
|
| 191 |
+
"ZNF22-AS1",
|
| 192 |
+
"SATL1",
|
| 193 |
+
"IL33",
|
| 194 |
+
"OR5AP2",
|
| 195 |
+
"CYP11B1",
|
| 196 |
+
"NOS2",
|
| 197 |
+
"CEP15",
|
| 198 |
+
"GTPBP10",
|
| 199 |
+
"OR2T5",
|
| 200 |
+
"ALOX12P2",
|
| 201 |
+
"KRT12",
|
| 202 |
+
"MARK1",
|
| 203 |
+
"AQP8",
|
| 204 |
+
"EMP1",
|
| 205 |
+
"ERAS",
|
| 206 |
+
"POU6F2",
|
| 207 |
+
"OR4N2",
|
| 208 |
+
"RFTN1",
|
| 209 |
+
"CNR1",
|
| 210 |
+
"SMO",
|
| 211 |
+
"USP2",
|
| 212 |
+
"PRDM11",
|
| 213 |
+
"MTRNR2L7",
|
| 214 |
+
"SFTPB",
|
| 215 |
+
"OR4D2",
|
| 216 |
+
"OTOP3",
|
| 217 |
+
"CFAP100",
|
| 218 |
+
"HIPK4",
|
| 219 |
+
"PDPR",
|
| 220 |
+
"CSKMT",
|
| 221 |
+
"COL24A1",
|
| 222 |
+
"VIPR2",
|
| 223 |
+
"CENPS-CORT",
|
| 224 |
+
"CCR4",
|
| 225 |
+
"NPBWR2",
|
| 226 |
+
"ADAMTS17",
|
| 227 |
+
"TSPY26P",
|
| 228 |
+
"PSPHP1",
|
| 229 |
+
"CHN2",
|
| 230 |
+
"ZNF175",
|
| 231 |
+
"ZNF229",
|
| 232 |
+
"GOLT1A",
|
| 233 |
+
"PRR15",
|
| 234 |
+
"GCHFR",
|
| 235 |
+
"IRX2-DT",
|
| 236 |
+
"GRM3",
|
| 237 |
+
"C3orf52",
|
| 238 |
+
"GALR2",
|
| 239 |
+
"OR52D1",
|
| 240 |
+
"NTPCR",
|
| 241 |
+
"LMX1B",
|
| 242 |
+
"AMIGO3",
|
| 243 |
+
"WNT3",
|
| 244 |
+
"C5orf47",
|
| 245 |
+
"ACADL",
|
| 246 |
+
"BEGAIN",
|
| 247 |
+
"EIF4E1B",
|
| 248 |
+
"MTRNR2L3",
|
| 249 |
+
"SLC30A8",
|
| 250 |
+
"BACE2",
|
| 251 |
+
"MYL10",
|
| 252 |
+
"TPTE2P3",
|
| 253 |
+
"ZFTA",
|
| 254 |
+
"REG1CP",
|
| 255 |
+
"PLPPR4",
|
| 256 |
+
"ACTRT2",
|
| 257 |
+
"TRIM44",
|
| 258 |
+
"CFAP68",
|
| 259 |
+
"SLCO4A1",
|
| 260 |
+
"CCN1",
|
| 261 |
+
"AIRE",
|
| 262 |
+
"CHI3L1",
|
| 263 |
+
"RNPEP",
|
| 264 |
+
"ERO1B",
|
| 265 |
+
"CEBPB",
|
| 266 |
+
"OR2M4",
|
| 267 |
+
"CMAS",
|
| 268 |
+
"CCDC80",
|
| 269 |
+
"ZNF57",
|
| 270 |
+
"EXTL1",
|
| 271 |
+
"FLJ33534",
|
| 272 |
+
"FAM234B",
|
| 273 |
+
"CADM2",
|
| 274 |
+
"AK3",
|
| 275 |
+
"EFNB3"
|
| 276 |
+
],
|
| 277 |
+
"Coefficient": [
|
| 278 |
+
0.041608457935575424,
|
| 279 |
+
0.04041883404405818,
|
| 280 |
+
0.03563854667645483,
|
| 281 |
+
0.03472815923494879,
|
| 282 |
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0.033104449063865074,
|
| 283 |
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0.0304859811806407,
|
| 284 |
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0.029089655564852136,
|
| 285 |
+
-0.027301062805680225,
|
| 286 |
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0.024783180624527106,
|
| 287 |
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0.023846465658667947,
|
| 288 |
+
0.02367776281877227,
|
| 289 |
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0.02320571643537615,
|
| 290 |
+
0.022850426447960825,
|
| 291 |
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0.02272080539572593,
|
| 292 |
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0.022613946698345107,
|
| 293 |
+
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|
| 294 |
+
0.020911204725675456,
|
| 295 |
+
0.020762816681715954,
|
| 296 |
+
0.020463313145543623,
|
| 297 |
+
0.0196780168865325,
|
| 298 |
+
0.01944230093044179,
|
| 299 |
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0.018778838961216623,
|
| 300 |
+
0.01809471162567251,
|
| 301 |
+
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|
| 302 |
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0.017399016734600436,
|
| 303 |
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0.016497316715052772,
|
| 304 |
+
-0.01545711278724786,
|
| 305 |
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0.013558433428628164,
|
| 306 |
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0.013397130506924254,
|
| 307 |
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0.013238999779407736,
|
| 308 |
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0.012853987197998022,
|
| 309 |
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0.012194435373377183,
|
| 310 |
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|
| 311 |
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0.011073021280375177,
|
| 312 |
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-0.010911707439850865,
|
| 313 |
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0.010470551624712164,
|
| 314 |
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0.010445942304973303,
|
| 315 |
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0.010335497031668877,
|
| 316 |
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0.0098851366543871,
|
| 317 |
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0.009368939034328862,
|
| 318 |
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0.009115268529899643,
|
| 319 |
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|
| 320 |
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0.008935845752018542,
|
| 321 |
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-0.008737743375351478,
|
| 322 |
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|
| 323 |
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-0.008612098172254827,
|
| 324 |
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0.008586121072643598,
|
| 325 |
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0.008483100110670853,
|
| 326 |
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0.008343917941101814,
|
| 327 |
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0.008244320702556644,
|
| 328 |
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0.008085569267794997,
|
| 329 |
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|
| 330 |
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|
| 331 |
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0.007556676481120306,
|
| 332 |
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0.007236707373955572,
|
| 333 |
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0.0071868188294294325,
|
| 334 |
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0.006780208560830149,
|
| 335 |
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0.006771894998533027,
|
| 336 |
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0.006764325319578277,
|
| 337 |
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|
| 338 |
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-0.006571570152684763,
|
| 339 |
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-0.006449734015557137,
|
| 340 |
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-0.006315394343914841,
|
| 341 |
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0.006254117188256126,
|
| 342 |
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-0.006031840326002409,
|
| 343 |
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0.005995698781894613,
|
| 344 |
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-0.00591897864377838,
|
| 345 |
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0.005838642085899952,
|
| 346 |
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0.005766274149793402,
|
| 347 |
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-0.005668212474557422,
|
| 348 |
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0.005657917993642334,
|
| 349 |
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0.005351828838625057,
|
| 350 |
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0.005210067445635276,
|
| 351 |
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0.004974141766266403,
|
| 352 |
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0.004949932905388036,
|
| 353 |
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-0.004930975222749687,
|
| 354 |
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0.004856926329568921,
|
| 355 |
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0.004830529298120576,
|
| 356 |
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0.004719942755201097,
|
| 357 |
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-0.004716700980632692,
|
| 358 |
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0.004584618533752956,
|
| 359 |
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0.004487792940637023,
|
| 360 |
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0.0044649467439599,
|
| 361 |
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0.004457996298085902,
|
| 362 |
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|
| 363 |
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0.0042677900555833995,
|
| 364 |
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0.004263699021997554,
|
| 365 |
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0.004160055092532612,
|
| 366 |
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|
| 367 |
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0.0038849707542909164,
|
| 368 |
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-0.0038431973523248755,
|
| 369 |
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0.0037421588083802783,
|
| 370 |
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-0.0037407037987102895,
|
| 371 |
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0.003706117668080275,
|
| 372 |
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-0.003673295440188685,
|
| 373 |
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-0.003573055683509263,
|
| 374 |
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0.003545654814690567,
|
| 375 |
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0.00349431501785488,
|
| 376 |
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0.003492414624136309,
|
| 377 |
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-0.0034077284740102764,
|
| 378 |
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-0.0033885953285984665,
|
| 379 |
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-0.0033878443584187358,
|
| 380 |
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-0.003387294292945273,
|
| 381 |
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0.0033480579593954903,
|
| 382 |
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0.003322840047869164,
|
| 383 |
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-0.0033226437718274246,
|
| 384 |
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-0.003299314747833392,
|
| 385 |
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-0.003285108440721425,
|
| 386 |
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-0.0032458887611218124,
|
| 387 |
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0.0032020124385455603,
|
| 388 |
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0.0031663094306089525,
|
| 389 |
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0.003034297174935379,
|
| 390 |
+
-0.0029425086462052485,
|
| 391 |
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0.002922131182819742,
|
| 392 |
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0.002915271836205951,
|
| 393 |
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-0.002730296769949976,
|
| 394 |
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-0.0026764735273574975,
|
| 395 |
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0.00265021296062984,
|
| 396 |
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0.002599246636438698,
|
| 397 |
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-0.002380791131476447,
|
| 398 |
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-0.002342582734015863,
|
| 399 |
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-0.0023248514703023116,
|
| 400 |
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-0.002297806204167622,
|
| 401 |
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-0.0021872587759704794,
|
| 402 |
+
0.0021395212360357098,
|
| 403 |
+
0.002109602416210598,
|
| 404 |
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0.002082593775565043,
|
| 405 |
+
0.002080739592118301,
|
| 406 |
+
-0.0019825595283648927,
|
| 407 |
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0.001959074287069807,
|
| 408 |
+
0.0019430447928956392,
|
| 409 |
+
0.0019360441479040046,
|
| 410 |
+
0.0019298770439339678,
|
| 411 |
+
0.0019068982878492912,
|
| 412 |
+
-0.0019033333240170659,
|
| 413 |
+
-0.0018966211554249425,
|
| 414 |
+
-0.0018057219100222385,
|
| 415 |
+
-0.0017998485935465638,
|
| 416 |
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-0.001778178767677486,
|
| 417 |
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0.0017755085493792097,
|
| 418 |
+
-0.001724590715481148,
|
| 419 |
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0.0017024582082534564,
|
| 420 |
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0.0016593527668871285,
|
| 421 |
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0.0016432536684007476,
|
| 422 |
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-0.001635957636781664,
|
| 423 |
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0.0015487263742243555,
|
| 424 |
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0.001513434853965926,
|
| 425 |
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0.0014490295842583736,
|
| 426 |
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0.0014108858211019832,
|
| 427 |
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0.0014071152886543797,
|
| 428 |
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0.001392049283730676,
|
| 429 |
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0.0013356881487756151,
|
| 430 |
+
-0.0013019985831901624,
|
| 431 |
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-0.0012921182205092542,
|
| 432 |
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0.0012644396476513677,
|
| 433 |
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-0.0011938042007112906,
|
| 434 |
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0.0011836957875147177,
|
| 435 |
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0.0011747336913209287,
|
| 436 |
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0.0011525569371836754,
|
| 437 |
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0.0011465360646888004,
|
| 438 |
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0.0011079253923126273,
|
| 439 |
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0.0010851541689914134,
|
| 440 |
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0.00104364552068331,
|
| 441 |
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0.0010385809596870329,
|
| 442 |
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-0.0010363574388819964,
|
| 443 |
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-0.0010299684703957168,
|
| 444 |
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-0.00098784948561655,
|
| 445 |
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0.000982554159330658,
|
| 446 |
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-0.0009758635817692218,
|
| 447 |
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-0.0009658914666955924,
|
| 448 |
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0.0009552139755550181,
|
| 449 |
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0.0009440594820411783,
|
| 450 |
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-0.0009438540101243099,
|
| 451 |
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0.0009085090199572732,
|
| 452 |
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0.0008648679532033198,
|
| 453 |
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0.0008337276262556277,
|
| 454 |
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0.0008250708286881056,
|
| 455 |
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-0.0008207222478109652,
|
| 456 |
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-0.0007983628211199104,
|
| 457 |
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-0.0007544729278860754,
|
| 458 |
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-0.0007397563841578762,
|
| 459 |
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0.0007354722208755376,
|
| 460 |
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-0.0007284537714112557,
|
| 461 |
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0.0007274162856614104,
|
| 462 |
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-0.0007206173740794354,
|
| 463 |
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-0.0007181993899024366,
|
| 464 |
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0.0007168790877632441,
|
| 465 |
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-0.0007025033354863097,
|
| 466 |
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-0.0006789471071580657,
|
| 467 |
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-0.0006597338422683717,
|
| 468 |
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0.000656684772403327,
|
| 469 |
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0.0006352952998958372,
|
| 470 |
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-0.0006207483447223172,
|
| 471 |
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-0.0006092442422935563,
|
| 472 |
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-0.0005983252042790666,
|
| 473 |
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-0.0005978993455456221,
|
| 474 |
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-0.0005865459363467224,
|
| 475 |
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0.0005786176149710187,
|
| 476 |
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0.0005489324302438747,
|
| 477 |
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0.0005429063930503521,
|
| 478 |
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0.0005217096960697939,
|
| 479 |
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-0.0005198573615279026,
|
| 480 |
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0.0005190693623177881,
|
| 481 |
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0.0005001829598066864,
|
| 482 |
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-0.0004952246762141764,
|
| 483 |
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-0.0004950205200283217,
|
| 484 |
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0.0004831044811854277,
|
| 485 |
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-0.0004756691422709974,
|
| 486 |
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0.00046699720103104053,
|
| 487 |
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0.00046366923351657245,
|
| 488 |
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0.00043434892276565434,
|
| 489 |
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0.0004242192216976486,
|
| 490 |
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0.00042124904144540587,
|
| 491 |
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0.0003952679198380279,
|
| 492 |
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0.00039072096757109844,
|
| 493 |
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|
| 494 |
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0.0003755885400609027,
|
| 495 |
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-0.000374690887130172,
|
| 496 |
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|
| 497 |
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|
| 498 |
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0.00033053753412204834,
|
| 499 |
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0.00032650293875725146,
|
| 500 |
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0.00032401043585045285,
|
| 501 |
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|
| 502 |
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-0.0003100599921623179,
|
| 503 |
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0.0002862440351787792,
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| 504 |
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|
| 505 |
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|
| 506 |
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0.0002728971908768894,
|
| 507 |
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0.00027249985286831665,
|
| 508 |
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|
| 509 |
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-0.0002503846060957734,
|
| 510 |
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0.0002453765373081028,
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| 511 |
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0.00023838039629194298,
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| 512 |
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0.00021189291696453573,
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| 513 |
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|
| 514 |
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| 515 |
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0.00018839700985472685,
|
| 516 |
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0.00018578181083106198,
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| 517 |
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| 518 |
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0.0001583377795601197,
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| 521 |
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| 522 |
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0.00012378545095535887,
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| 524 |
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0.00010699116710155298,
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| 526 |
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| 527 |
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8.700691151976322e-05,
|
| 528 |
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6.930344017448562e-05,
|
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6.623386123512747e-05,
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| 530 |
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4.461315624621384e-05,
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4.448931651209654e-05,
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4.290747378359612e-05,
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2.7171268260727337e-05,
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| 536 |
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2.3922492975173387e-05,
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| 538 |
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| 539 |
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|
| 540 |
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1.0534394595473136e-05,
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| 541 |
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9.973254111693904e-06,
|
| 542 |
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| 543 |
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| 544 |
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|
| 545 |
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|
| 546 |
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1.7818069917728886e-06,
|
| 547 |
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1.4859656997225911e-06,
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],
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| 826 |
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"cv_performance": {
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| 827 |
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"prediction": {
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"accuracy": 83.47826086956522,
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"precision": 26.666666666666664,
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}
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}
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| 840 |
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}
|
p3/regress/Autism_spectrum_disorder_(ASD)/significant_genes_condition_Obesity.json
ADDED
|
The diff for this file is too large to render.
See raw diff
|
|
|
p3/regress/Bile_Duct_Cancer/significant_genes_condition_Age.json
ADDED
|
@@ -0,0 +1,75 @@
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|
| 1 |
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{
|
| 2 |
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"significant_genes": {
|
| 3 |
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"Variable": [
|
| 4 |
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"KCNN2",
|
| 5 |
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"FANCD2",
|
| 6 |
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"PERM1",
|
| 7 |
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"PIGV",
|
| 8 |
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"TRPC5",
|
| 10 |
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"PRSS16",
|
| 11 |
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| 12 |
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| 13 |
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"RRP7BP",
|
| 14 |
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"ETFRF1",
|
| 15 |
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"ILF2",
|
| 16 |
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"TCAIM",
|
| 17 |
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"CDC37L1",
|
| 18 |
+
"ITPR3",
|
| 19 |
+
"ARID3C",
|
| 20 |
+
"TRIM59"
|
| 21 |
+
],
|
| 22 |
+
"Coefficient": [
|
| 23 |
+
-0.07599830376278696,
|
| 24 |
+
0.028460444387876312,
|
| 25 |
+
0.024324576945632025,
|
| 26 |
+
-0.023831299999999608,
|
| 27 |
+
-0.023140647594933533,
|
| 28 |
+
-0.02065213230372122,
|
| 29 |
+
0.014440416739505567,
|
| 30 |
+
-0.014325587814703685,
|
| 31 |
+
-0.01370162913084783,
|
| 32 |
+
0.012566003435966738,
|
| 33 |
+
-0.012210554466109597,
|
| 34 |
+
0.009714764107766212,
|
| 35 |
+
-0.006322288204603231,
|
| 36 |
+
-0.006193105213495954,
|
| 37 |
+
0.0051423452201069435,
|
| 38 |
+
-0.0043371804995758255,
|
| 39 |
+
0.002827410850287314
|
| 40 |
+
],
|
| 41 |
+
"Absolute Coefficient": [
|
| 42 |
+
0.07599830376278696,
|
| 43 |
+
0.028460444387876312,
|
| 44 |
+
0.024324576945632025,
|
| 45 |
+
0.023831299999999608,
|
| 46 |
+
0.023140647594933533,
|
| 47 |
+
0.02065213230372122,
|
| 48 |
+
0.014440416739505567,
|
| 49 |
+
0.014325587814703685,
|
| 50 |
+
0.01370162913084783,
|
| 51 |
+
0.012566003435966738,
|
| 52 |
+
0.012210554466109597,
|
| 53 |
+
0.009714764107766212,
|
| 54 |
+
0.006322288204603231,
|
| 55 |
+
0.006193105213495954,
|
| 56 |
+
0.0051423452201069435,
|
| 57 |
+
0.0043371804995758255,
|
| 58 |
+
0.002827410850287314
|
| 59 |
+
]
|
| 60 |
+
},
|
| 61 |
+
"cv_performance": {
|
| 62 |
+
"prediction": {
|
| 63 |
+
"accuracy": 100.0,
|
| 64 |
+
"precision": 100.0,
|
| 65 |
+
"recall": 100.0,
|
| 66 |
+
"f1": 100.0
|
| 67 |
+
},
|
| 68 |
+
"selection": {
|
| 69 |
+
"precision": 0.0,
|
| 70 |
+
"recall": 0.0,
|
| 71 |
+
"f1": 0.0,
|
| 72 |
+
"jaccard": 0.0
|
| 73 |
+
}
|
| 74 |
+
}
|
| 75 |
+
}
|
p3/regress/Bile_Duct_Cancer/significant_genes_condition_Gender.json
ADDED
|
@@ -0,0 +1,75 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"KATNIP",
|
| 5 |
+
"MELK",
|
| 6 |
+
"ARID3C",
|
| 7 |
+
"CCDC196",
|
| 8 |
+
"PRSS16",
|
| 9 |
+
"DLGAP5",
|
| 10 |
+
"IQCE",
|
| 11 |
+
"HDAC6",
|
| 12 |
+
"TCAIM",
|
| 13 |
+
"ISOC1",
|
| 14 |
+
"CLPX",
|
| 15 |
+
"KCNN2",
|
| 16 |
+
"ZNF213",
|
| 17 |
+
"TMEM79",
|
| 18 |
+
"PERM1",
|
| 19 |
+
"CYB561",
|
| 20 |
+
"CDC45"
|
| 21 |
+
],
|
| 22 |
+
"Coefficient": [
|
| 23 |
+
0.036593295895871396,
|
| 24 |
+
0.03544728508680135,
|
| 25 |
+
-0.033555819431927786,
|
| 26 |
+
-0.03000639302619288,
|
| 27 |
+
0.029990466353119215,
|
| 28 |
+
0.02296360065317904,
|
| 29 |
+
0.020352577618481978,
|
| 30 |
+
-0.019251512381346998,
|
| 31 |
+
-0.01639315506670343,
|
| 32 |
+
-0.015445834740288092,
|
| 33 |
+
-0.011603492734947648,
|
| 34 |
+
-0.008274117904147891,
|
| 35 |
+
0.00758518687220639,
|
| 36 |
+
0.006714838514269654,
|
| 37 |
+
0.005687690099894956,
|
| 38 |
+
0.0020866522512566375,
|
| 39 |
+
0.0010274080144784827
|
| 40 |
+
],
|
| 41 |
+
"Absolute Coefficient": [
|
| 42 |
+
0.036593295895871396,
|
| 43 |
+
0.03544728508680135,
|
| 44 |
+
0.033555819431927786,
|
| 45 |
+
0.03000639302619288,
|
| 46 |
+
0.029990466353119215,
|
| 47 |
+
0.02296360065317904,
|
| 48 |
+
0.020352577618481978,
|
| 49 |
+
0.019251512381346998,
|
| 50 |
+
0.01639315506670343,
|
| 51 |
+
0.015445834740288092,
|
| 52 |
+
0.011603492734947648,
|
| 53 |
+
0.008274117904147891,
|
| 54 |
+
0.00758518687220639,
|
| 55 |
+
0.006714838514269654,
|
| 56 |
+
0.005687690099894956,
|
| 57 |
+
0.0020866522512566375,
|
| 58 |
+
0.0010274080144784827
|
| 59 |
+
]
|
| 60 |
+
},
|
| 61 |
+
"cv_performance": {
|
| 62 |
+
"prediction": {
|
| 63 |
+
"accuracy": 100.0,
|
| 64 |
+
"precision": 100.0,
|
| 65 |
+
"recall": 100.0,
|
| 66 |
+
"f1": 100.0
|
| 67 |
+
},
|
| 68 |
+
"selection": {
|
| 69 |
+
"precision": 0.0,
|
| 70 |
+
"recall": 0.0,
|
| 71 |
+
"f1": 0.0,
|
| 72 |
+
"jaccard": 0.0
|
| 73 |
+
}
|
| 74 |
+
}
|
| 75 |
+
}
|
p3/regress/Bile_Duct_Cancer/significant_genes_condition_Hypertension.json
ADDED
|
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"PTGFR",
|
| 5 |
+
"TNN"
|
| 6 |
+
],
|
| 7 |
+
"Coefficient": [
|
| 8 |
+
0.009277340478783792,
|
| 9 |
+
0.006967671008273566
|
| 10 |
+
],
|
| 11 |
+
"Absolute Coefficient": [
|
| 12 |
+
0.009277340478783792,
|
| 13 |
+
0.006967671008273566
|
| 14 |
+
]
|
| 15 |
+
},
|
| 16 |
+
"cv_performance": {
|
| 17 |
+
"prediction": {
|
| 18 |
+
"accuracy": 91.11111111111111,
|
| 19 |
+
"precision": 0.0,
|
| 20 |
+
"recall": 0.0,
|
| 21 |
+
"f1": 0.0
|
| 22 |
+
},
|
| 23 |
+
"selection": {
|
| 24 |
+
"precision": 0.0,
|
| 25 |
+
"recall": 0.0,
|
| 26 |
+
"f1": 0.0,
|
| 27 |
+
"jaccard": 0.0
|
| 28 |
+
}
|
| 29 |
+
}
|
| 30 |
+
}
|
p3/regress/Bile_Duct_Cancer/significant_genes_condition_None.json
ADDED
|
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"TNN",
|
| 5 |
+
"PTGFR"
|
| 6 |
+
],
|
| 7 |
+
"Coefficient": [
|
| 8 |
+
0.010558120349052702,
|
| 9 |
+
0.01023350308154596
|
| 10 |
+
],
|
| 11 |
+
"Absolute Coefficient": [
|
| 12 |
+
0.010558120349052702,
|
| 13 |
+
0.01023350308154596
|
| 14 |
+
]
|
| 15 |
+
},
|
| 16 |
+
"cv_performance": {
|
| 17 |
+
"prediction": {
|
| 18 |
+
"accuracy": 90.0,
|
| 19 |
+
"precision": 0.0,
|
| 20 |
+
"recall": 0.0,
|
| 21 |
+
"f1": 0.0
|
| 22 |
+
},
|
| 23 |
+
"selection": {
|
| 24 |
+
"precision": 0.0,
|
| 25 |
+
"recall": 0.0,
|
| 26 |
+
"f1": 0.0,
|
| 27 |
+
"jaccard": 0.0
|
| 28 |
+
}
|
| 29 |
+
}
|
| 30 |
+
}
|
p3/regress/Bile_Duct_Cancer/significant_genes_condition_Obesity.json
ADDED
|
@@ -0,0 +1,30 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
{
|
| 2 |
+
"significant_genes": {
|
| 3 |
+
"Variable": [
|
| 4 |
+
"PTGFR",
|
| 5 |
+
"TNN"
|
| 6 |
+
],
|
| 7 |
+
"Coefficient": [
|
| 8 |
+
0.010692341693534635,
|
| 9 |
+
0.010156187082902893
|
| 10 |
+
],
|
| 11 |
+
"Absolute Coefficient": [
|
| 12 |
+
0.010692341693534635,
|
| 13 |
+
0.010156187082902893
|
| 14 |
+
]
|
| 15 |
+
},
|
| 16 |
+
"cv_performance": {
|
| 17 |
+
"prediction": {
|
| 18 |
+
"accuracy": 90.0,
|
| 19 |
+
"precision": 0.0,
|
| 20 |
+
"recall": 0.0,
|
| 21 |
+
"f1": 0.0
|
| 22 |
+
},
|
| 23 |
+
"selection": {
|
| 24 |
+
"precision": 0.0,
|
| 25 |
+
"recall": 0.0,
|
| 26 |
+
"f1": 0.0,
|
| 27 |
+
"jaccard": 0.0
|
| 28 |
+
}
|
| 29 |
+
}
|
| 30 |
+
}
|
p3/regress/Bipolar_disorder/significant_genes_condition_Age.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Anorexia_Nervosa.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Atrial_Fibrillation.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Breast_Cancer.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_COVID-19.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Cardiovascular_Disease.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Chronic_kidney_disease.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Chronic_obstructive_pulmonary_disease_(COPD).json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Coronary_artery_disease.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Gender.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Huntingtons_Disease.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Hypertension.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Insomnia.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Liver_Cancer.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Liver_cirrhosis.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Migraine.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_None.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Obesity.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Obsessive-Compulsive_Disorder.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Obstructive_sleep_apnea.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Osteoarthritis.json
ADDED
|
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Polycystic_Ovary_Syndrome.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Post-Traumatic_Stress_Disorder.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Prostate_Cancer.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Psoriasis.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Schizophrenia.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Stroke.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Type_1_Diabetes.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bipolar_disorder/significant_genes_condition_Type_2_Diabetes.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bladder_Cancer/significant_genes_condition_Age.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bladder_Cancer/significant_genes_condition_Gender.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bladder_Cancer/significant_genes_condition_Hypertension.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bladder_Cancer/significant_genes_condition_None.json
ADDED
|
The diff for this file is too large to render.
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|
|
|
p3/regress/Bladder_Cancer/significant_genes_condition_Obesity.json
ADDED
|
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|
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p3/regress/Breast_Cancer/significant_genes_condition_Age.json
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p3/regress/Breast_Cancer/significant_genes_condition_Atrial_Fibrillation.json
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